Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31237
(334 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 3e-15
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 76 6e-15
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-14
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 72 1e-13
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-13
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 7e-13
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 69 1e-12
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 3e-12
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 3e-12
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 66 5e-12
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-12
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-12
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-12
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 9e-12
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 66 9e-12
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 65 2e-11
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 65 2e-11
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 5e-11
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 63 5e-11
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-11
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-11
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 60 6e-10
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 6e-10
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 59 1e-09
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 58 1e-09
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 58 2e-09
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-09
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 56 7e-09
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 9e-09
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 55 1e-08
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 55 1e-08
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 55 2e-08
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 52 2e-07
SB_1366| Best HMM Match : Collagen (HMM E-Value=6.2e-05) 51 2e-07
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 51 3e-07
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 51 3e-07
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 5e-07
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 50 6e-07
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 49 1e-06
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-06
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04) 48 2e-06
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 47 4e-06
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-06
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 46 6e-06
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 45 2e-05
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 45 2e-05
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 44 2e-05
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 44 4e-05
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 43 5e-05
SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31) 43 7e-05
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 43 7e-05
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 42 1e-04
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 41 3e-04
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 40 5e-04
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 40 7e-04
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 9e-04
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07) 38 0.002
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036) 38 0.002
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 38 0.002
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003) 38 0.003
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 38 0.003
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 36 0.006
SB_1292| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029) 36 0.008
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.019
SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042) 35 0.019
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 35 0.019
SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.025
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 33 0.044
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 33 0.044
SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.058
SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018) 33 0.058
SB_50127| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.076
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 33 0.076
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.076
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.076
SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.10
SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14) 32 0.10
SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078) 32 0.10
SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9) 31 0.18
SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09) 31 0.18
SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09) 31 0.18
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 31 0.31
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 31 0.31
SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 30 0.41
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.41
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.41
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 30 0.41
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.54
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 30 0.54
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 30 0.54
SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07) 30 0.54
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56) 29 0.94
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 29 0.94
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 29 0.94
SB_38267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.94
SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_28449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59) 29 1.2
SB_46911| Best HMM Match : MSSP (HMM E-Value=4.4) 29 1.2
SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021) 29 1.2
SB_27528| Best HMM Match : Epimerase (HMM E-Value=3.2e-06) 29 1.2
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 29 1.2
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 28 2.2
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 28 2.2
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 28 2.2
SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025) 27 2.9
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088) 27 2.9
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 27 2.9
SB_33814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 27 3.8
SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 27 3.8
SB_45669| Best HMM Match : RVT_1 (HMM E-Value=0.14) 27 3.8
SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18) 27 3.8
SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0) 27 3.8
SB_57619| Best HMM Match : DUF229 (HMM E-Value=0) 27 5.0
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 27 5.0
SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 27 5.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 26 6.6
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 26 6.6
SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_35485| Best HMM Match : CRAM_rpt (HMM E-Value=1) 26 6.6
SB_3202| Best HMM Match : AFP (HMM E-Value=2.9) 26 6.6
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 26 8.8
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 26 8.8
SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22) 26 8.8
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 77.4 bits (182), Expect = 3e-15
Identities = 49/118 (41%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK--------- 180
PG PG+ + L GQ G G+ G +GD G +GPPG G + G K
Sbjct: 973 PGRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPG---LPGPVGKEGPPGEDGN 1029
Query: 179 -GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
GEKGY G PG G G KG+ G G G PG G G +G +QG GFKG GEK
Sbjct: 1030 IGEKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEK 1087
Score = 73.3 bits (172), Expect = 4e-14
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYA-KGEKGY 165
PG PGV D P G KG+ G+ G +G KGE G PG GE G+ +G+KG
Sbjct: 1372 PGAPGV--DGPT----GPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGD 1425
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGF-KGFSGEKEEK 3
G PG +G PG +G RG G G PG G+ G+ G +G +G+ KG G + EK
Sbjct: 1426 RGLPGPSGPPGEEGARGSDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEK 1481
Score = 70.5 bits (165), Expect = 3e-13
Identities = 40/94 (42%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G G G+ GP GETG + G+ GEKG G PG G PG +G +GDQG
Sbjct: 1307 GPVGPAGPPGLPGRAGQAGPKGETGLPGMPGL--DGEKGSAGVPGIPGGPGGRGFKGDQG 1364
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 6
G G G G+ G T +G G G G K E
Sbjct: 1365 PPGLNGNPGAPGVDGPTGPKGESGIAGLDGPKGE 1398
Score = 67.7 bits (158), Expect = 2e-12
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-------KGE 174
PG G+T + + G KG+ G G+ G G G PG G++ I+G+ G
Sbjct: 1144 PGQRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGV 1203
Query: 173 KGYPGYPGFN--GVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEK 12
+G G PG G+PG G +G++G +G+PG+ G G+QG GP G GF+G K
Sbjct: 1204 QGVKGDPGVGQPGLPGPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPGPPGQIGFTGAK 1263
Query: 11 EEK 3
K
Sbjct: 1264 GSK 1266
Score = 67.3 bits (157), Expect = 3e-12
Identities = 39/90 (43%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G +GD+G G G+ G GPPG G G G G PG PG G PG KG RG G
Sbjct: 927 GARGDIGSRGLPGEDGPRGPPGIQGMKGAKGDAITGPTGPPGPPGLPGRPGLKGERGRDG 986
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
DG G+ G G +G T GP G G G
Sbjct: 987 LDGQNGLPGIPGPKGDTGPVGPPGRPGLPG 1016
Score = 66.9 bits (156), Expect = 4e-12
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYP 153
G PG+ P P G +G G G +G++G GPPG+ G+ G KG+ G PG P
Sbjct: 508 GLPGIGPPGPDGDR-GPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPP 566
Query: 152 GFNGVPGRKGIRGDQGSD---GYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G GVPG G++G G G G G+ G +G S QG G G G +
Sbjct: 567 GEVGVPGAPGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPR 616
Score = 65.7 bits (153), Expect = 9e-12
Identities = 41/103 (39%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK------GEKGYPGYPGFNGVPGRKG 123
G G GL G+ G GE GP G GES G + G+ G PG G G PGR G
Sbjct: 758 GNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPGTDGLPGAPGRDG 817
Query: 122 I---RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
I RG +G G GM G+ G+ GP G G +GE+ K
Sbjct: 818 IDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVK 860
Score = 65.7 bits (153), Expect = 9e-12
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEI----GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 117
GQ G G G +GD+GE+ G PG G + AKG++G PG G +G+PG +G
Sbjct: 1255 GQIGFTGAKGSKGDQGELVIERGAPGPRGNT-----GAKGDRGIPGLNGLSGIPGERGPV 1309
Query: 116 GDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G G PG G G +G + G G G GEK
Sbjct: 1310 GPAGPPGLPGRAGQAGPKG--ETGLPGMPGLDGEK 1342
Score = 65.3 bits (152), Expect = 1e-11
Identities = 43/111 (38%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG-IYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G G G+TGE+G KG+ GP GE G + G + G +G G PG G PGR+G+ G
Sbjct: 846 GPPGPPGVTGEQGVKGDTGPSGEPGPAGPPGPLGTPGTQGAKGEPGPLGTPGRQGLAGPP 905
Query: 107 GSDGY---------------PGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
G DG PG GDIG +G + GP+G G G K K
Sbjct: 906 GRDGMKGDPGPRGRDGLPGEPGARGDIGSRGLPGEDGPRGPPGIQGMKGAK 956
Score = 64.9 bits (151), Expect = 2e-11
Identities = 43/106 (40%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -3
Query: 323 PGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGF 147
PG D A G G G+ G G KGE G GE G++ I G G G PG G
Sbjct: 1102 PGPKGDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGL 1161
Query: 146 NGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G PGR G G G G PG G GI G GP G G G K
Sbjct: 1162 KGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVK 1207
Score = 64.5 bits (150), Expect = 2e-11
Identities = 48/126 (38%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGE------------IGPPGETGESLIDGI 189
PG PG+ + A + G G G G +GD+G GP G GES I G+
Sbjct: 1333 PGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPTGPKGESGIAGL 1392
Query: 188 YA-KGEKGYPGY---PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 21
KGE G PG G G PG G+RGD+G G PG G G +G +G GF G
Sbjct: 1393 DGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLPGPSGPPGEEGA--RGSDGFPGIP 1450
Query: 20 GEKEEK 3
G K E+
Sbjct: 1451 GSKGER 1456
Score = 63.7 bits (148), Expect = 4e-11
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGE-SLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGD 111
G G G+ G +G++G IGP G GE GI +GEKG G+PG NG PG G RG
Sbjct: 1442 GSDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGINGPPGPPGQRGY 1501
Query: 110 QGSDGYPGMGGDIGIQG 60
+G+ G PG G G G
Sbjct: 1502 EGARGPPGAKGQAGEDG 1518
Score = 63.3 bits (147), Expect = 5e-11
Identities = 47/108 (43%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = -3
Query: 332 PGWPGVTPDXP-MAFLFGQKGDMGLTGEEGDKGEIGPPGETGESL-IDGIY-AKGEKGYP 162
PG P P P A G G GL G G KGE GP GE GE I G AKG++G
Sbjct: 699 PG-PSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPGPTGEKGEVFRIKGEKGAKGQQGGI 757
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G PG G+ G G G+QG G PG G G +QGP G G G
Sbjct: 758 GNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPG 805
Score = 63.3 bits (147), Expect = 5e-11
Identities = 37/87 (42%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G +G G GP GE G + G G G PG PG GV G +G++GD G
Sbjct: 805 GTDGLPGAPGRDGIDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVKGDTG 864
Query: 104 SDGYPGMGGDIGIQGT-SQQGPKGFKG 27
G PG G G GT QG KG G
Sbjct: 865 PSGEPGPAGPPGPLGTPGTQGAKGEPG 891
Score = 62.5 bits (145), Expect = 8e-11
Identities = 40/90 (44%), Positives = 48/90 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KG+ G+ G +G G GPPG TGE G+ KG+ G G PG G PG G G QG
Sbjct: 832 GMKGEAGV-GIDGPPGPPGPPGVTGEQ---GV--KGDTGPSGEPGPAGPPGPLGTPGTQG 885
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
+ G PG G G QG + GP G G G+
Sbjct: 886 AKGEPGPLGTPGRQGLA--GPPGRDGMKGD 913
Score = 62.1 bits (144), Expect = 1e-10
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG+ P+ G G+ G GE+G G GP GETGE +DG G G PG P
Sbjct: 1009 PGRPGLP--GPVG-KEGPPGEDGNIGEKGYAGLPGPRGETGEKGLDG--PSGPPGTPGQP 1063
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ----QGPKGFKGFSGEK 12
G G G +G +G G G G G +G GTS+ GPKG G +G +
Sbjct: 1064 GPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEPGNVPGPKGDPGPAGPR 1114
Score = 62.1 bits (144), Expect = 1e-10
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIG-------PPGETGESLIDGIYAKGE 174
PG G + G KG+ GL G +G KGE G P GE G+S GI G
Sbjct: 1435 PGEEGARGSDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGI--NGP 1492
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPK-GFKGFSGEKEEK 3
G PG G+ G G G +G G DG PG+ G + + +G + GF G G EK
Sbjct: 1493 PGPPGQRGYEGARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEK 1550
Score = 61.7 bits (143), Expect = 1e-10
Identities = 35/89 (39%), Positives = 44/89 (49%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KG+ G G G +G GPPG G G +G G PG PG G G +G+ G+ G
Sbjct: 885 GAKGEPGPLGTPGRQGLAGPPGRDGMKGDPG--PRGRDGLPGEPGARGDIGSRGLPGEDG 942
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G PG+ G G +G + GP G G G
Sbjct: 943 PRGPPGIQGMKGAKGDAITGPTGPPGPPG 971
Score = 60.1 bits (139), Expect = 4e-10
Identities = 37/89 (41%), Positives = 43/89 (48%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G++G+ G G KG IG PG G++ A GEKG G G PG G RG +G
Sbjct: 564 GPPGEVGVPGAPGMKGPIGKPGPVGDA-----GAPGEKGARGL-SIQGTPGMDGKRGPRG 617
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G G G G S GP G KG G
Sbjct: 618 PIGEKGPTGFPGPPGDSDYGPPGDKGLKG 646
Score = 58.8 bits (136), Expect = 1e-09
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG+ A G+ G G+ G +G+KG G PG G G KG++G PG G
Sbjct: 1313 GPPGLPGRAGQAGPKGETGLPGMPGLDGEKGSAGVPGIPGGP--GGRGFKGDQGPPGLNG 1370
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G PG G G +G G G+ G G G + GP G KG G
Sbjct: 1371 NPGAPGVDGPTGPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPG 1415
Score = 56.8 bits (131), Expect = 4e-09
Identities = 38/104 (36%), Positives = 48/104 (46%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG + A + GQ+G G G G +G G PG G++ + G KG PG G
Sbjct: 1130 GEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPGRDGQN-----GSPGRKGEPGPAG 1184
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
NG+ G G G G G G+ GD G+ GP G KG G
Sbjct: 1185 KNGINGLDGPPGPDGPAGVQGVKGDPGVGQPGLPGPAGPKGERG 1228
Score = 56.8 bits (131), Expect = 4e-09
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLT----GEEGDKGEIGPPGETGESLIDGIYA-KGEKG 168
PG PG G KGD G G G +G G G+ G ++G+ GE+G
Sbjct: 1248 PGPPGPPGQIGFTGAKGSKGDQGELVIERGAPGPRGNTGAKGDRGIPGLNGLSGIPGERG 1307
Query: 167 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ----QGPKGFKGFSGEK 12
G G G+PGR G G +G G PGM G G +G++ G G +GF G++
Sbjct: 1308 PVGPAGPPGLPGRAGQAGPKGETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQ 1363
Score = 56.0 bits (129), Expect = 7e-09
Identities = 40/107 (37%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = -3
Query: 323 PGVTPDXPMAFL-FGQKGDMGLTGEEGDKGEI--GPPGETGESLIDGIYAKGEKGYPGYP 153
P V+PD A GQ G G GE G + G GE G G G +G G+P
Sbjct: 236 PRVSPDFLAALEGLGQDGVPGPKGEPGRAPTLLKGVKGEPGPEGPQG--PPGVRGDTGFP 293
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G NG G G +G G G G G++GI QG KG KG G +
Sbjct: 294 GLNGTQGLPGPKGPPGPTGPEGPKGNMGISFKGPQGMKGDKGTKGAR 340
Score = 55.6 bits (128), Expect = 9e-09
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG + + G G G G G G G PG GE + GEKG G PG
Sbjct: 1091 GPPGTSEPGNVPGPKGDPGPAGPRGPAGRNGIDGLPGTKGEP-----GSLGEKGDAGIPG 1145
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G+ G G+ G QG G PG G G G + GP G G +G
Sbjct: 1146 QRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGING 1190
Score = 54.4 bits (125), Expect = 2e-08
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGV---------PG 132
G G G G KG G PGE GE G KGE+G PG PG G+ PG
Sbjct: 345 GGSGGSGCNGTTIFKGPPGAPGEKGEPGKQG--EKGEEGRPGLPGAQGIEGPKGERGEPG 402
Query: 131 RKGIRGDQGSDGYPGMGGDI 72
+G++GD+G DG PG G +
Sbjct: 403 NQGLKGDRGVDGNPGPIGPL 422
Score = 52.4 bits (120), Expect = 9e-08
Identities = 38/97 (39%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGEKGYPGYPGFN---GVPGRK 126
G+KG G +G G G+ GPPG G G +GEKG G PG + VPG K
Sbjct: 1046 GEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEPGNVPGPK 1105
Query: 125 GIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSG 18
G G G G G G G+ GT + G G KG +G
Sbjct: 1106 GDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAG 1142
Score = 51.2 bits (117), Expect = 2e-07
Identities = 46/128 (35%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGP------------PGETGESLIDGI 189
PG PG + P G KG+ G G+EG G IGP PG GE G+
Sbjct: 628 PGPPGDSDYGPPGDK-GLKGNTGPPGDEGVPGPIGPKGDKCEACPKPPPGPAGEPGSPGL 686
Query: 188 YAK----GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGP----KG 36
+ G +G PG G G PG G G G DG PG G G G T ++G KG
Sbjct: 687 PGEDGAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPGPTGEKGEVFRIKG 746
Query: 35 FKGFSGEK 12
KG G++
Sbjct: 747 EKGAKGQQ 754
Score = 50.0 bits (114), Expect = 5e-07
Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGF------------N 144
G+KGD G G G G G G G G + GE G PG PG +
Sbjct: 1479 GEKGDSGFPGINGPPGPPGQRGYEGARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGRED 1538
Query: 143 GVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 33
G PG +G G++G+ G PG+ G IG+ G GF
Sbjct: 1539 GFPGIEGPLGEKGATGLPGLTGSIGVPGPPGYSDFGF 1575
Score = 49.2 bits (112), Expect = 8e-07
Identities = 41/123 (33%), Positives = 49/123 (39%), Gaps = 17/123 (13%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PGV D L G +G G G G G GP G G S KG+KG G G
Sbjct: 282 GPPGVRGDTGFPGLNGTQGLPGPKGPPGPTGPEGPKGNMGISFKGPQGMKGDKGTKGARG 341
Query: 149 ----------------FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFS 21
F G PG G +G+ G G G G G+ G +GPKG +G
Sbjct: 342 PPGGGSGGSGCNGTTIFKGPPGAPGEKGEPGKQGEKGEEGRPGLPGAQGIEGPKGERGEP 401
Query: 20 GEK 12
G +
Sbjct: 402 GNQ 404
Score = 48.0 bits (109), Expect = 2e-06
Identities = 38/98 (38%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG--YPGYPGFNGVPGRKGIRGD 111
G G GL G +G G GPPG TG +G KG G + G G G G KG RG
Sbjct: 288 GDTGFPGLNGTQGLPGPKGPPGPTGP---EG--PKGNMGISFKGPQGMKGDKGTKGARGP 342
Query: 110 Q-GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
G G G G +G G KG G GEK E+
Sbjct: 343 PGGGSGGSGCNGTTIFKGPPGAPGEKGEPGKQGEKGEE 380
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSD 99
GE G G PG G PG +G +G S+
Sbjct: 459 GEPGASGRPGIPGRPGTQGAKGSTVSN 485
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 76.2 bits (179), Expect = 6e-15
Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG----IYAKGEKGYPGYPGFNGVPGRKG 123
L G +G G G GD+G GP G GE +G + GEKGY G PG G+ G++G
Sbjct: 38 LEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRG 97
Query: 122 IRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
GD GS G G GD G+ G GP+GF G G K
Sbjct: 98 PEGDPGSPGGSGEAGDKGVDGPPGSPGPQGFNGARGPNGPK 138
Score = 57.2 bits (132), Expect = 3e-09
Identities = 31/75 (41%), Positives = 38/75 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G GL G+ G +G+ G PG +GE+ G+ G G PG GFNG G G +GD G
Sbjct: 85 GAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGV--DGPPGSPGPQGFNGARGPNGPKGDSG 142
Query: 104 SDGYPGMGGDIGIQG 60
G G G G G
Sbjct: 143 RPGQDGRQGPPGPPG 157
Score = 56.8 bits (131), Expect = 4e-09
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG-------IYAKGEKGYPGYPGFNGVPGRK 126
G+ G G G +G+KG G PG G + G I +G G G G +G G
Sbjct: 13 GRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAA 72
Query: 125 GIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
G+ GD G GY G G G+QG +G G G SGE +K
Sbjct: 73 GLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSPGGSGEAGDK 114
Score = 56.0 bits (129), Expect = 7e-09
Identities = 37/87 (42%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G +GE GDKG GPPG G +G A+G G G G G GR+G G G
Sbjct: 100 GDPGSPGGSGEAGDKGVDGPPGSPGPQGFNG--ARGPNGPKGDSGRPGQDGRQGPPGPPG 157
Query: 104 SDGYPGMGGDIGIQGTSQQGP-KGFKG 27
+ G PG + IQ S+ GP KG G
Sbjct: 158 ARGEPGQQAPMMIQ-VSRPGPNKGPPG 183
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGEKGYPGYPGFNGVPGRKGIRGD 111
+GD G G +G G IGP G G + G +G G G G G G KG G+
Sbjct: 6 QGDPGEPGRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGE 65
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G++G G+ GD G +G +G G +G G++
Sbjct: 66 DGAEGAAGLVGDSGEKG--YRGAPGRQGLQGKR 96
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS- 54
G PGE G G A G +G GY G G G +G+RG G+ G G G G +G +
Sbjct: 7 GDPGEPGRDGTPG--AIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAG 64
Query: 53 QQGPKGFKGFSGEKEEK 3
+ G +G G G+ EK
Sbjct: 65 EDGAEGAAGLVGDSGEK 81
Score = 35.1 bits (77), Expect = 0.014
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGE 207
PG PG G KGD G G++G +G GPPG GE
Sbjct: 120 PGSPGPQGFNGARGPNGPKGDSGRPGQDGRQGPPGPPGARGE 161
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 74.5 bits (175), Expect = 2e-14
Identities = 41/91 (45%), Positives = 49/91 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G+ G TG G KG+ G G G++ DG+ G KG PG PGF G PG+ GIRG +G
Sbjct: 65 GPTGESGPTGALGAKGQKGRMGLKGDAGYDGV--DGFKGLPGPPGFQGDPGKPGIRGHEG 122
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G G IG G + G G GF G K
Sbjct: 123 LQGVSGKAGSIGDPGPN--GASGMPGFDGTK 151
Score = 62.9 bits (146), Expect = 6e-11
Identities = 38/88 (43%), Positives = 47/88 (53%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G MG G GD+G GPPGE G S G+ KG++G G G G G+ G+ GD+G G
Sbjct: 2 GLMGSRGTPGDRGPRGPPGEQGFS---GV--KGKEGRDGVKGERGSKGKSGLPGDKGPVG 56
Query: 95 YPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
PG G G T + GP G G G+K
Sbjct: 57 PPGHPGHKG--PTGESGPTGALGAKGQK 82
Score = 57.2 bits (132), Expect = 3e-09
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G G GL G G +G+ G PG G + G+ K G G PG G +G+PG G +GD
Sbjct: 95 GVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPGFDGTKGDP 154
Query: 107 GSDGYPGMGGDI 72
G +G G+ GDI
Sbjct: 155 GDEGNEGLPGDI 166
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 71.7 bits (168), Expect = 1e-13
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G G +G G+ G +G+ GP G G ++G +G+ G G PG NG PGR G+RG +
Sbjct: 56 GLPGKLGHQGKRGRRGKPGPEGPAGVQGMEGRQGVQGKDGEEGPPGPNGAPGRPGVRGPK 115
Query: 107 GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G G G+ G+ G+QG QG +G KG G +
Sbjct: 116 GESGSRGLPGNHGVQGERGSQGGRGIKGGRGNE 148
Score = 67.7 bits (158), Expect = 2e-12
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G+TG+ G G +G PG+ G + G G G G G PGR+G RGD G
Sbjct: 188 GPYGPQGMTGDRGKPGLVGDPGKKGMA--------GRAGAMGMRGLPGPPGRRGKRGDPG 239
Query: 104 SDGYPGMGGD---IGIQG-TSQQGPKGFKGFSGEKEEK 3
SDG PG GD +G+QG + G G KG G + ++
Sbjct: 240 SDGIPGERGDRGILGVQGEPGKDGSPGLKGTRGTRGKR 277
Score = 64.1 bits (149), Expect = 3e-11
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G+ G +G G G KG GP G G++ + G GEKG G G NG+PG+ G +G +
Sbjct: 8 GRLGAIGNPGPMGLKGRRGPRGMRGKAGMSGPKGYSGEKGMQGDRGENGLPGKLGHQGKR 67
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G PG G G+QG +G +G +G GE+
Sbjct: 68 GRRGKPGPEGPAGVQG--MEGRQGVQGKDGEE 97
Score = 64.1 bits (149), Expect = 3e-11
Identities = 41/104 (39%), Positives = 56/104 (53%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG P+ P A + G +G G+ G++G++G GP G G + G KGE G G PG
Sbjct: 71 GKPG--PEGP-AGVQGMEGRQGVQGKDGEEGPPGPNGAPGRPGVRG--PKGESGSRGLPG 125
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
+GV G +G +G +G G G G GI G + G KG +G G
Sbjct: 126 NHGVQGERGSQGGRGIKGGRGNEGSAGIPG--RAGNKGGRGDRG 167
Score = 63.3 bits (147), Expect = 5e-11
Identities = 37/93 (39%), Positives = 49/93 (52%)
Frame = -3
Query: 296 AFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 117
A + G KG G G +GD+GE G PG+ G G +G+ G G G G+ GR+G++
Sbjct: 34 AGMSGPKGYSGEKGMQGDRGENGLPGKLGHQGKRG--RRGKPGPEGPAGVQGMEGRQGVQ 91
Query: 116 GDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G +G PG G G G +GPKG G G
Sbjct: 92 GKDGEEGPPGPNGAPGRPGV--RGPKGESGSRG 122
Score = 59.7 bits (138), Expect = 6e-10
Identities = 38/108 (35%), Positives = 51/108 (47%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G G+T D L G G G+ G G G G PG G +G+ G G PG
Sbjct: 191 GPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPGPPGRR-----GKRGDPGSDGIPG 245
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G G G++G+ G DG PG+ G G +G ++G +G KG + EE
Sbjct: 246 ERGDRGILGVQGEPGKDGSPGLKGTRGTRG--KRGERGRKGDMCDSEE 291
Score = 57.2 bits (132), Expect = 3e-09
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G GD+G++G G GE G G++GE+ G GE+G G PG G PG KG+ G +
Sbjct: 1099 GVAGDIGVSGVRGPTGEQGVQGQSGETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLPGPK 1158
Query: 107 GSDGYPGMGGDIGIQGT----SQQGPKGFKGFSG 18
G G G G +G G + G G +G SG
Sbjct: 1159 GGPGPGGTRGPVGEAGEDGLHGKDGKPGTQGVSG 1192
Score = 56.4 bits (130), Expect = 5e-09
Identities = 41/107 (38%), Positives = 53/107 (49%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PGV G+ G GL G G +GE G G G I G +G +G G P
Sbjct: 106 PGRPGVRGPK------GESGSRGLPGNHGVQGERGSQGGRG---IKG--GRGNEGSAGIP 154
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G G +G RG G G G G +GIQG+ +GP G +G +G++
Sbjct: 155 GRAGNKGGRGDRGPVGPVGVIGNPGLMGIQGS--EGPYGPQGMTGDR 199
Score = 52.8 bits (121), Expect = 7e-08
Identities = 30/79 (37%), Positives = 39/79 (49%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG G+ + G G G G+ GD G G PGE G+ I G+ +GE G G P
Sbjct: 208 PGKKGMAGRAGAMGMRGLPGPPGRRGKRGDPGSDGIPGERGDRGILGV--QGEPGKDGSP 265
Query: 152 GFNGVPGRKGIRGDQGSDG 96
G G G +G RG++G G
Sbjct: 266 GLKGTRGTRGKRGERGRKG 284
Score = 51.2 bits (117), Expect = 2e-07
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G +G G+ G G++G G PG G G G G G PG G+ G +G G Q
Sbjct: 134 GSQGGRGIKGGRGNEGSAGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQGSEGPYGPQ 193
Query: 107 GSDG---YPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G PG+ GD G +G + G G +G G
Sbjct: 194 GMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPG 227
Score = 51.2 bits (117), Expect = 2e-07
Identities = 35/109 (32%), Positives = 50/109 (45%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG+ D + G+ G MG+ G G G G G+ G DGI GE+G G G
Sbjct: 200 GKPGLVGDPGKKGMAGRAGAMGMRGLPGPPGRRGKRGDPGS---DGI--PGERGDRGILG 254
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G PG+ G G +G+ G G G+ G +G + +G +E +
Sbjct: 255 VQGEPGKDGSPGLKGTRGTRGKRGERGRKGDMCDSEESEEGECDSEESE 303
Score = 51.2 bits (117), Expect = 2e-07
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFN 144
G+ P P+ G++G GL G+ G G G PG G G GE G G G +
Sbjct: 1127 GLGPTGPV----GEQGSYGLPGKPGSPGTKGLPGPKGGPGPGGTRGPVGEAGEDGLHGKD 1182
Query: 143 GVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G PG +G+ G+ G G PG+ G + G
Sbjct: 1183 GKPGTQGVSGNDGPIGSPGLQGKRAMSG 1210
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = -3
Query: 197 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
D + A G +G GYPG N GR+G+ G G DG PG G +G++G GP+G G G
Sbjct: 401 DQMAAMGSRGRTGYPGRN---GRQGMPGADGDDGVPGSAGLMGVRG--PVGPEGLPGAIG 455
Score = 43.2 bits (97), Expect = 5e-05
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGP---PGETGESLIDGIYAKGEKGYPG 159
G+PG M G G G G G +G +GP PG G + GI + G
Sbjct: 413 GYPGRNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEGLPGAIGPVVCMGITSYRTCGTYE 472
Query: 158 YP-------GFNGVP-GRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
YP G G P G G G G G PG G G G GP+G +GF+G
Sbjct: 473 YPVDEWIPCGTYGYPVGASGPTGGMGLIGKPGEMGSSGPAGPQGSAGPRGEQGFTG 528
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
G G MGL G+ G+ G GP G G + +GE+G+ G PG +G G+ + G
Sbjct: 492 GPTGGMGLIGKPGEMGSSGPAGPQGSA-----GPRGEQGFTGNPGPDGKNGKNVLVG 543
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
K + G G G PGR G +G G+DG G+ G G+ G +GP G +G G
Sbjct: 400 KDQMAAMGSRGRTGYPGRNGRQGMPGADGDDGVPGSAGLMGV--RGPVGPEGLPG 452
Score = 36.7 bits (81), Expect = 0.005
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -3
Query: 242 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG---IRGDQGSDGYPGMGGDI 72
K ++ G G + G G +G PG G +GVPG G +RG G +G PG G +
Sbjct: 400 KDQMAAMGSRGRTGYPG--RNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEGLPGAIGPV 457
Query: 71 GIQG 60
G
Sbjct: 458 VCMG 461
Score = 34.3 bits (75), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGE 207
L G +GD+G G+ G +GE GP G++G+
Sbjct: 665 LRGPQGDIGANGDRGKRGERGPNGQSGK 692
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESL 201
G GD G GE G G+ G PG GE +
Sbjct: 673 GANGDRGKRGERGPNGQSGKPGAKGEMI 700
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGI 189
G +G G GE+G G GP G+ G++++ G+
Sbjct: 513 GPQGSAGPRGEQGFTGNPGPDGKNGKNVLVGL 544
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGE 174
G +G G G GD+G+ G G G+S G AKGE
Sbjct: 664 GLRGPQGDIGANGDRGKRGERGPNGQSGKPG--AKGE 698
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 70.9 bits (166), Expect = 2e-13
Identities = 45/106 (42%), Positives = 52/106 (49%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG A G GD G+ G EG+KGE G PG LI GE+G G P
Sbjct: 260 PGKPGSRGQAGPAGKRGMIGDRGVRGAEGNKGESGAPG-----LIGAEGPVGEEGGRGRP 314
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
G G G +G+ G G DG PG G G +G S GP GF G G+
Sbjct: 315 GKPGADGPEGLPGPAGDDGRPGENGAPGSRGNS--GPAGFPGAKGK 358
Score = 57.6 bits (133), Expect = 2e-09
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
GQ+G +G+TG G G +G G +G G G G PG G G PGR G G
Sbjct: 19 GQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIKGPPGRAGGTGLM 78
Query: 107 GSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGEK 12
G G PG+ G G +G+S + G G G SG K
Sbjct: 79 GYLGEPGVVGGAGPKGSSGRPGDVGQAGASGPK 111
Score = 56.0 bits (129), Expect = 7e-09
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = -3
Query: 299 MAFLF-GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 123
MAF+F G G G GE GDKG+ G PG+ G +G G G G+ G +G
Sbjct: 234 MAFVFQGNVGKSGSKGESGDKGQPGKPGK-----------PGSRGQAGPAGKRGMIGDRG 282
Query: 122 IRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
+RG +G+ G G G IG +G ++G +G G G
Sbjct: 283 VRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPG 318
Score = 51.2 bits (117), Expect = 2e-07
Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGET--GESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G G G +GE GP G T + G K G KG G G G PG+ G RG G G
Sbjct: 214 GDLGAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPAG 273
Query: 95 YPGMGGDIGIQGTSQQGPKGFKGFSG 18
GM GD G++G +G KG G G
Sbjct: 274 KRGMIGDRGVRGA--EGNKGESGAPG 297
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS----QQGPKGFKGFSGE 15
G+ G PG G +G G +G +G G G PG+ G +G G S QGP G G G+
Sbjct: 1 GQVGLPGLNGIDGPEGERGQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQ 59
Score = 43.6 bits (98), Expect = 4e-05
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYPGYP 153
G+T +A G G G G +G G G PG+ G I G + G GY G P
Sbjct: 25 GMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIKGPPGRAGGTGLMGYLGEP 84
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
G G G KG G G G G G G
Sbjct: 85 GVVGGAGPKGSSGRPGDVGQAGASGPKG 112
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 69.3 bits (162), Expect = 7e-13
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMG------LTGEEGDKGEIGPPGET----GESLIDGIYAKGEK 171
G T D A G KGD+G G +G KGE+GPPG ++L+ KGE+
Sbjct: 3632 GETGDVGAAGAKGDKGDVGPVGIRGFKGNKGMKGEVGPPGPPERIDNQTLLAAKGDKGER 3691
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G+PG G G G +G RG++G+ G PG G G +G G G G GEK K
Sbjct: 3692 GFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPRGPI--GQPGMAGSQGEKGGK 3745
Score = 69.3 bits (162), Expect = 7e-13
Identities = 41/101 (40%), Positives = 54/101 (53%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G+PG G +G+ G TG G +G GP G G+ + G ++GEKG G PG
Sbjct: 3692 GFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPRGPIGQPGMAG--SQGEKGGKGDPG 3749
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
F G+PG+ G+RG QG +G G G GI G + G KG G
Sbjct: 3750 FPGLPGQAGLRGLQGPEGQKGSIGAPGIPG--KIGEKGVPG 3788
Score = 66.9 bits (156), Expect = 4e-12
Identities = 44/115 (38%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGE---IGPPGETGESLIDGIY-AKGEKGY 165
PG P + + G KG+ G G G KGE GP GE G + G + G +G
Sbjct: 3670 PGPPERIDNQTLLAAKGDKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPRGP 3729
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
G PG G G KG +GD G G PG G G+QG Q+G G G G+ EK
Sbjct: 3730 IGQPGMAGSQGEKGGKGDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEK 3784
Score = 66.5 bits (155), Expect = 5e-12
Identities = 43/110 (39%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG P P + + G G G G +G+KGE ES + KG KG PG PG
Sbjct: 3405 GPPG--PPGPASTVAGPVGTRGFPGLKGEKGE------PAESTNVNPFTKGVKGEPGVPG 3456
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
F G+ G G+ G G G PG G GI G GP GF G G E+
Sbjct: 3457 FPGLKGEIGLIGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPGER 3506
Score = 60.5 bits (140), Expect = 3e-10
Identities = 42/112 (37%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = -3
Query: 332 PGWPGVTPDXPMAF---LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 162
PG+PG+ + + L G G G G G G GPPG G G +G G
Sbjct: 3455 PGFPGLKGEIGLIGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPG--ERGLSGID 3512
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G PG G G +GI G QGS G PG G G GP G G G K E
Sbjct: 3513 GPPGDAGPVGPRGINGIQGSQGVPGEPGPAGNGEKGAIGPIGPAGTKGNKGE 3564
Score = 52.4 bits (120), Expect = 9e-08
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Frame = -3
Query: 284 GQKGDMGLTGE---------EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 132
G KG++G GE E ++ + + GE+ G+ KGE G PG G G G
Sbjct: 3560 GNKGELGSKGEKYNYHYKDTEQERLALKSYQQKGETGTTGV--KGESGTPGLDGSPGKDG 3617
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQGT----SQQGPKGFKGFSGEKEEK 3
G GD GS G G GD+G G GP G +GF G K K
Sbjct: 3618 PTGSPGDPGSKGDRGETGDVGAAGAKGDKGDVGPVGIRGFKGNKGMK 3664
Score = 47.6 bits (108), Expect = 3e-06
Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Frame = -3
Query: 284 GQKGDMGLTGE-------------EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFN 144
G+KGD GL G +G KG+ G + + KGE+G G PG
Sbjct: 3269 GEKGDRGLPGPAVFIATNSTVVTVKGQKGDAGTCSSNCSQQVIRVL-KGEQGPQGPPGLK 3327
Query: 143 GVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G+ G KG G G G G G G G + GP G KG G
Sbjct: 3328 GIKGDKGFPGMVGFPGLRGKTGLPGKPGKGKPGPTGPKGEQG 3369
Score = 43.6 bits (98), Expect = 4e-05
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPG--ETGESLIDGIYAKGEKG-------------YPGYPGFNGVPG 132
G GE+GD+G GP T +++ KG+ G G G G PG
Sbjct: 3266 GAKGEKGDRGLPGPAVFIATNSTVVTVKGQKGDAGTCSSNCSQQVIRVLKGEQGPQGPPG 3325
Query: 131 RKGIRGDQGSD---GYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
KGI+GD+G G+PG+ G G+ G +G G G GE+
Sbjct: 3326 LKGIKGDKGFPGMVGFPGLRGKTGLPGKPGKGKPGPTGPKGEQ 3368
Score = 42.3 bits (95), Expect = 9e-05
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGE-SLIDGIYAK--GEKGYP 162
PG+PG+ + L G +G G G G G+IG G G S I G K
Sbjct: 3748 PGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKNIS 3807
Query: 161 GYPGFNGVPGRKG-IRGDQGSDGYPGMGGDIG 69
G PG G PG+ I G G G PG G G
Sbjct: 3808 GPPGPQGPPGQASQIPGPPGPQGPPGPPGPPG 3839
Score = 41.5 bits (93), Expect = 2e-04
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK------GEK 171
PG+PG+ G++G G+ G GD G +GP G G G+ + GEK
Sbjct: 3494 PGFPGLKGSP------GERGLSGIDGPPGDAGPVGPRGINGIQGSQGVPGEPGPAGNGEK 3547
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSD-GYPGMGGD---IGIQGTSQQGPKGFKGFSGE 15
G G G G G KG G +G Y + + ++ Q+G G G GE
Sbjct: 3548 GAIGPIGPAGTKGNKGELGSKGEKYNYHYKDTEQERLALKSYQQKGETGTTGVKGE 3603
Score = 32.3 bits (70), Expect = 0.10
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPG-------FNGVPGRKGIRGDQGSDGYPGMGGDI 72
G P E+ I G AKGEKG G PG + V KG +GD G+ I
Sbjct: 3253 GIPSRASEA-ITGEGAKGEKGDRGLPGPAVFIATNSTVVTVKGQKGDAGTCSSNCSQQVI 3311
Query: 71 GIQGTSQ--QGPKGFKGFSGEK 12
+ Q QGP G KG G+K
Sbjct: 3312 RVLKGEQGPQGPPGLKGIKGDK 3333
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 68.9 bits (161), Expect = 1e-12
Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYP 162
G PG + G G G TG+ GD+G G G GE G K G +G P
Sbjct: 471 GKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMP 530
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEE 6
G G G PG KG RG++G G PG+ G G G+ GP G +G +GEK E
Sbjct: 531 GASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGE 583
Score = 66.1 bits (154), Expect = 7e-12
Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYP 153
G PG+T G KG G G +G G GPPG G G G G G
Sbjct: 627 GRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRN 686
Query: 152 GFNGVPGRKGIRGDQGSDGYP---GMGGDIGIQGTSQQGPKGFKGFSGE 15
G G PGR G G G DG P G GG+IG +G ++GP G +G+ G+
Sbjct: 687 GVKGTPGRDGEPGIPGPDGRPGERGPGGEIGRKG--EKGPSGERGYPGK 733
Score = 64.1 bits (149), Expect = 3e-11
Identities = 41/106 (38%), Positives = 53/106 (50%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG G +G +GLTG+ G +G GPPG G + G A G +G G P
Sbjct: 131 PGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQG---VRG--APGNEGARGLP 185
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
G G+ G++G G +GS G G G G QG+ +G G G GE
Sbjct: 186 GNPGLKGKRGATGSRGSPGNQGPQGPSGPQGS--KGQAGIDGRPGE 229
Score = 63.3 bits (147), Expect = 5e-11
Identities = 36/94 (38%), Positives = 47/94 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G+ G G G G PGE G G +G G G PG G G G RG++G
Sbjct: 411 GLAGSRGMPGVAGKNGNAGEPGERGPVGPQG--PQGAPGTQGPPGLPGKTGESGPRGERG 468
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
+DG PG G+ G QG + GP G G +G+ ++
Sbjct: 469 TDGKPGAMGERGPQG--ETGPTGLTGPTGKPGDR 500
Score = 63.3 bits (147), Expect = 5e-11
Identities = 37/91 (40%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 108
GQ G G G+ GD+G GP G G GI AKG G G PG G G++G G +
Sbjct: 585 GQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSK 644
Query: 107 GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G +G PG G G+ G + GP G G G
Sbjct: 645 GGEGTPGSQGMPGMSGPPGRPGPPGPPGPPG 675
Score = 61.3 bits (142), Expect = 2e-10
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG+ + G KG+ G GE G G+ GPPG +G +G G +G G G
Sbjct: 786 GKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLGANG--EPGVQGAKGARG 843
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
+G G++G G QG +G G G+ G +G +QGP G G G
Sbjct: 844 DDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGVAGTDG 888
Score = 60.9 bits (141), Expect = 3e-10
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = -3
Query: 323 PGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFN 144
PG M G++G G G G++G +GPPG IDG + G PG G N
Sbjct: 521 PGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPG------IDG-----KDGAPGSDGLN 569
Query: 143 GVP------GRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G P G KG G G++G+ G GD G G T GP+G G G K
Sbjct: 570 GPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKGAK 620
Score = 60.1 bits (139), Expect = 4e-10
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGP---PGETGES------LIDG-IYAK 180
G PGV A G++G +G G +G G GP PG+TGES DG A
Sbjct: 417 GMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAM 476
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ----GPKGFKGFSGEK 12
GE+G G G G+ G G GD+GS+G G G+ G QGT ++ G +G G SG +
Sbjct: 477 GERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASGRR 536
Score = 59.3 bits (137), Expect = 8e-10
Identities = 30/70 (42%), Positives = 38/70 (54%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G+ G+ G+ G +G GE GP GE G G GE+GYPG G G PG G+RG G
Sbjct: 693 GRDGEPGIPGPDGRPGERGPGGEIGRKGEKG--PSGERGYPGKDGRAGEPGAVGLRGPTG 750
Query: 104 SDGYPGMGGD 75
G G+ G+
Sbjct: 751 QPGENGLPGE 760
Score = 58.0 bits (134), Expect = 2e-09
Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G G +GE+G PGE+G + G G PG PGF+G PG G G +G
Sbjct: 99 GLPGPRGSDGPRGQRGEVGLPGESGSA--------GMVGRPGRPGFDGAPGAPGSPGAEG 150
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G G G G G QG +G G G +
Sbjct: 151 KVGLTGQTGPRGPTGPPGLQGVRGAPGNEGAR 182
Score = 57.2 bits (132), Expect = 3e-09
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G +G GL G G KG+ G G G G G +G G G +G PG G+ GD+
Sbjct: 177 GNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDK 236
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G+ G PG G GI+G S G G G G
Sbjct: 237 GAMGGPGPAGQPGIRGPS--GAPGITGNPG 264
Score = 57.2 bits (132), Expect = 3e-09
Identities = 43/106 (40%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG P P G G G +G G G G PG GE GI G G PG
Sbjct: 662 PGRPG-PPGPP-----GPPGPSGPSGSNGRNGVKGTPGRDGEP---GI--PGPDGRPGER 710
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G GRKG +G G GYPG G G G +GP G G +G
Sbjct: 711 GPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGPTGQPGENG 756
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/96 (37%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G +G G G +G GE G PG+ G G + G +G G PG G PG GI GD+
Sbjct: 213 GPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDR 272
Query: 107 GSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEK 12
G +G PG G G G + GP G G G +
Sbjct: 273 GPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGSR 308
Score = 54.0 bits (124), Expect = 3e-08
Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G +GD G G++G G GP G G+ G KGE+G PG G +G PG +G G
Sbjct: 840 GARGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGVAGTDGPPGPRGNVGPM 899
Query: 107 GSDGYPGMGGDIGIQG 60
G G PG+ G G G
Sbjct: 900 GPMGDPGLPGPPGPPG 915
Score = 53.2 bits (122), Expect = 5e-08
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = -3
Query: 251 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
+G +G GPPG+ G+ GE G PG G+NG PG +G+RGD G G G G
Sbjct: 9 KGQRGPDGPPGDIGDQ-----GPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPP 63
Query: 71 GIQGTSQQGPKG 36
G + G KG
Sbjct: 64 GGSTQTAGGIKG 75
Score = 53.2 bits (122), Expect = 5e-08
Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGY 156
PG PG L GQ G G TG G +G G PG G + G KG++G G
Sbjct: 140 PGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGS 199
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G G +G G QGS G G+ G G G G KG G G
Sbjct: 200 RGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGL--PGDKGAMGGPG 243
Score = 51.2 bits (117), Expect = 2e-07
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG-IYAKGEKGYPG---YPGFNGVPGR---K 126
G +G G+ G +G G G PG TG G + +KG +G PG PG +G PGR
Sbjct: 609 GPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPP 668
Query: 125 GIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEEK 3
G G G G G G G++GT + G G G G E+
Sbjct: 669 GPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIPGPDGRPGER 710
Score = 51.2 bits (117), Expect = 2e-07
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -3
Query: 242 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 63
+G+ G G G I G+ KGE+G PG PG G G G G G++G PG+ G G +
Sbjct: 785 QGKPGINGTNGRGGIPGL--KGERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQGAKGAR 842
Query: 62 G----TSQQGPKGFKGFSGEKEEK 3
G +QGP G +G +G + +K
Sbjct: 843 GDDGKDGKQGPAGPQGPNGPQGDK 866
Score = 46.8 bits (106), Expect = 4e-06
Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGES--------------LIDGIY----AKGEKGYPG 159
GQ G+ G+ G+ G +G+ GP G G S L GI A G +G PG
Sbjct: 40 GQPGNQGMRGDPGPQGDQGPQGPPGGSTQTAGGIKGPDPNDLAAGIKGSNGAPGPRGSPG 99
Query: 158 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
PG G G +G RG+ G G G G +G + G GF G G
Sbjct: 100 LPGPRGSDGPRGQRGEVGLPGESGSAGMVG-----RPGRPGFDGAPG 141
Score = 44.8 bits (101), Expect = 2e-05
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
L GQ+G G G+ GD+G G G+ G GY G PG G+ G G +GD
Sbjct: 8 LKGQRGPDGPPGDIGDQGPSGEAGK-----------PGPLGYNGQPGNQGMRGDPGPQGD 56
Query: 110 QGSDGYPGMGGDI--GIQGTSQQG-PKGFKGFSG 18
QG G PG GI+G G KG +G
Sbjct: 57 QGPQGPPGGSTQTAGGIKGPDPNDLAAGIKGSNG 90
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 67.3 bits (157), Expect = 3e-12
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGY 156
PG GV P P + G+ G G TG G +G GP G G + G +G G G
Sbjct: 285 PGRNGV-PGRPGSK--GKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGA 341
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G NG PGR G RG G G+ G+ G G++G T +GP+G +GF+G++
Sbjct: 342 KGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGKQ 390
Score = 63.7 bits (148), Expect = 4e-11
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G GL G +G +G GP G+TG + G+ +G +GY G G G G+ G +G +G
Sbjct: 424 GATGPRGLRGLKGSRGWTGPRGKTGATGPQGL--RGYRGYTGARGLQGKTGKTGQKGAKG 481
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKE 9
+ G G+ G G +G +GP+G KG G +E
Sbjct: 482 ARGTQGVRGPRGYRGPQGLRGPQGAKGTQGVRE 514
Score = 62.9 bits (146), Expect = 6e-11
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA----KGEKGYP 162
GW G + L G KG +G G +G +G +GP G G G KG +G
Sbjct: 121 GWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLT 180
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSG 18
G G G G +G+RG +G G PG+ G G++G GP+G+ G +G
Sbjct: 181 GPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTG 229
Score = 62.5 bits (145), Expect = 8e-11
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G+ G G G G +G G PG TG + G A G +GY G G GVPG+ G G
Sbjct: 184 GKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTP 243
Query: 107 GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G +G PG G +G +G G KG +G G++
Sbjct: 244 GKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQ 276
Score = 61.3 bits (142), Expect = 2e-10
Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIR 117
G+ G G G G KG +GP G TG G K G +G G PG NGVPGR G +
Sbjct: 238 GRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPGSK 297
Query: 116 GDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G+ G G G G++G QG +G KG G
Sbjct: 298 GKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRG 331
Score = 61.3 bits (142), Expect = 2e-10
Identities = 39/105 (37%), Positives = 50/105 (47%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG G L G KG G G++G +G G PG G + G G KG G
Sbjct: 249 PGAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNG---VPG--RPGSKGKTGAR 303
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G G +G+RG QG+ G G+ G G+QG + G G KG +G
Sbjct: 304 GATGPRGLRGLRGPQGNQGLRGLKGSRGVQG--RPGKNGAKGRNG 346
Score = 56.0 bits (129), Expect = 7e-09
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYP 153
G G T + L G +G+ GL G +G +G G PG+ G +G + G +G G
Sbjct: 301 GARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPR 360
Query: 152 GFNGVPGRKGI------RGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
GF G+ G KG+ RG QG G+ G G G+ G T + G G G G
Sbjct: 361 GFTGLKGAKGVRGATGLRGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLRG 412
Score = 56.0 bits (129), Expect = 7e-09
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G+ G G TG +G KG G G G G K G +G PG G G G+ G+RG Q
Sbjct: 355 GKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQ 414
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G G G G +G +G KG +G++G +
Sbjct: 415 GLKGLKGKTGATGPRGL--RGLKGSRGWTGPR 444
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRG 114
L G KG G TG G G GP G G G +G+ G G G G G +G+RG
Sbjct: 431 LRGLKGSRGWTGPRGKTGATGPQGLRGYRGYTGARGLQGKTGKTGQKGAKGARGTQGVRG 490
Query: 113 DQGSDGYPGMGGDIGIQGT 57
+G G G+ G G +GT
Sbjct: 491 PRGYRGPQGLRGPQGAKGT 509
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 67.3 bits (157), Expect = 3e-12
Identities = 37/91 (40%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G+ G G IGP G+ G+ G GE+G+ G G NG PG+ G G QG
Sbjct: 2 GPPGVKGPQGDNGRDGPIGPKGDQGDIGPQG--PPGERGFSGKDGLNGTPGKDGPEGPQG 59
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 15
G G G +G G +GPKG KG G+
Sbjct: 60 PKGDSGSPGAVGSPGPMGPEGPKGDKGDKGD 90
Score = 66.9 bits (156), Expect = 4e-12
Identities = 37/89 (41%), Positives = 48/89 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G +G G G+ G G +G PG G G KG+KG G PG +G PG +G +G+ G
Sbjct: 53 GPEGPQGPKGDSGSPGAVGSPGPMGPEGPKG--DKGDKGDTGAPGIDGQPGPQGEKGETG 110
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G GD G QG Q GP+G +G +G
Sbjct: 111 PQGEQGPKGDTGPQG--QPGPEGPQGPAG 137
Score = 53.6 bits (123), Expect = 4e-08
Identities = 34/84 (40%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G EG KG+ G G+TG IDG + G G G G G +G +GD G
Sbjct: 68 GAVGSPGPMGPEGPKGDKGDKGDTGAPGIDG-----QPGPQGEKGETGPQGEQGPKGDTG 122
Query: 104 SDGYPGMGGDIGIQGTS-QQGPKG 36
G PG G G G S GP+G
Sbjct: 123 PQGQPGPEGPQGPAGPSGADGPQG 146
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 66.5 bits (155), Expect = 5e-12
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
GQKG G+TGE+G +G G G G+ ++ ++ +G G PG G+PG +G G+ G
Sbjct: 320 GQKGQQGITGEKGARGTQGVAGAAGQIVV--CKSRIPQGSSGVPGAQGMPGPRGSTGEAG 377
Query: 104 SDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEK 12
G PG GD G G +G G KG G +
Sbjct: 378 RQGPPGANGDRGQPGAPGAEGAMGEKGNQGSR 409
Score = 62.5 bits (145), Expect = 8e-11
Identities = 37/92 (40%), Positives = 46/92 (50%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
L GQ+G G G G GE GP G G + +DG G G G PG +G G G +G
Sbjct: 716 LQGQRGPPGPKGSRGIAGEAGPDGPAGPAGLDG--KNGINGEDGAPGSDGAQGNPGPQGP 773
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
G+ G PG G G G + GP+G G +GE
Sbjct: 774 TGTRGIPGPQGKNGKMGPT--GPRGPSGKNGE 803
Score = 58.4 bits (135), Expect = 1e-09
Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G+ G +G G++GP G G S +G G +G G G NGV G KG G +G
Sbjct: 772 GPTGTRGIPGPQGKNGKMGPTGPRGPSGKNG--EPGPQGPEGEAGANGVSGPKGEMGPEG 829
Query: 104 SDGYPGMGGDIGIQG----TSQQGPKGFKGFSGE 15
G PG G G G T Q G G G +GE
Sbjct: 830 EAGQPGPPGPPGPNGPVGQTGQPGTPGPDGAAGE 863
Score = 56.0 bits (129), Expect = 7e-09
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G+TG G G G G G G KG++G PG G +G G KG G +G
Sbjct: 526 GANGQRGVTGPSGSPGPGGLQGAAGMPGPAG--PKGDRGSPGVSGASGAKGAKGHEGGRG 583
Query: 104 SDGYPGMGGDIGIQG-------TSQQGPKGFKGFSG 18
G G G+ G+ G +GP+G KG SG
Sbjct: 584 KRGQRGETGEQGLPGARGKQGANGPRGPRGIKGASG 619
Score = 55.6 bits (128), Expect = 9e-09
Identities = 39/108 (36%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG G+ M G KGD G G G G G G G G +GE G G P
Sbjct: 540 PGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGKRG--QRGETGEQGLP 597
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFSGEK 12
G G G G RG +G G G+ G G+QG +GP G G G +
Sbjct: 598 GARGKQGANGPRGPRGIKGASGLQGGPGLQGPGGFKGPIGPTGLQGAR 645
Score = 53.2 bits (122), Expect = 5e-08
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 90
G +G G +G GP G TGE+ G A G++G PG PG G G K G+QGS G
Sbjct: 356 GSSGVPGAQGMPGPRGSTGEAGRQGPPGANGDRGQPGAPGAEGAMGEK---GNQGSRGPT 412
Query: 89 GMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G G G T +G G G G K E+
Sbjct: 413 GRVGPDG--KTGPKGQNGIPGRDGRKGER 439
Score = 52.4 bits (120), Expect = 9e-08
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG----IYAKGEKGYPGYPGFNGVPGRKGIR 117
G G G +G+ G+ G GP GE G + + G + +GE G PG P G PG G
Sbjct: 790 GPTGPRGPSGKNGEPGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPP---GPPGPNGPV 846
Query: 116 GDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
G G G PG G G G +GP+G G
Sbjct: 847 GQTGQPGTPGPDGAAGEPGA--RGPRGKLG 874
Score = 49.6 bits (113), Expect = 6e-07
Identities = 30/79 (37%), Positives = 36/79 (45%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG G + + G KG+MG GE G G GPPG G G+ G PG P
Sbjct: 804 PGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNG--------PVGQTGQPGTP 855
Query: 152 GFNGVPGRKGIRGDQGSDG 96
G +G G G RG +G G
Sbjct: 856 GPDGAAGEPGARGPRGKLG 874
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = -3
Query: 239 GEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G +GPPG G G+ G PG G NG G+KG GD GS+G G G G+ G
Sbjct: 114 GRLGPPGRRGPP--------GQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 42.3 bits (95), Expect = 9e-05
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 15
G G G G G QG+ G G+ G IG+QG GPKG +G +GE
Sbjct: 688 GITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGE 734
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/54 (40%), Positives = 27/54 (50%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
G +G G G G+ G PG GE+ G KG G PG G G PG+ G+ G
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDGENGEQG--QKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/54 (40%), Positives = 25/54 (46%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G G G GPPG+ G +DG GE+G G G G G G G G DG
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDG--ENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKG---EIGPPGETGESLIDGIYAKGEKGYPG 159
G PG D G +G MG G +G +G +GP G+TG KG+ G PG
Sbjct: 380 GPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTG--------PKGQNGIPG 431
Query: 158 YPGFNG 141
G G
Sbjct: 432 RDGRKG 437
Score = 33.5 bits (73), Expect = 0.044
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETG 210
G++G G +G+ G +G +GPPG+ G
Sbjct: 138 GEQGQKGSSGDPGSEGPVGPPGKPG 162
Score = 33.5 bits (73), Expect = 0.044
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEK 12
G G G G +G PG G+ QG+ G PG G G +G + G KG KG G +
Sbjct: 526 GANGQRGVTGPSGSPGPGGL---QGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGR 582
Query: 11 EEK 3
++
Sbjct: 583 GKR 585
Score = 32.7 bits (71), Expect = 0.076
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG 192
PG G L G+ G+ G G GD G GP G G+ +DG
Sbjct: 119 PGRRGPPGQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPGKPGMDG 165
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 66.5 bits (155), Expect = 5e-12
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = -3
Query: 251 EGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
+GD G GPPG G GI KG +G G PG +G+PGR GI+G++G G G G
Sbjct: 166 KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSGM 225
Query: 74 IGIQG-TSQQGPKGFKGFSGEKEEK 3
G G Q+G +G +G +G K EK
Sbjct: 226 KGDDGKIGQKGDRGERGETGFKGEK 250
Score = 57.2 bits (132), Expect = 3e-09
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYP 162
G PG P P + G++G G+ G +G++G G PG G GI + G KG
Sbjct: 167 GDPG--PPGPPGIM-GRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDS 223
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ---GTSQQGPKGFKGFSGE 15
G G +G G+KG RG++G G+ G GD GI T Q PK +GE
Sbjct: 224 GMKGDDGKIGQKGDRGERGETGFKGEKGDAGISVRAPTITQPPKSLITIAGE 275
Score = 50.0 bits (114), Expect = 5e-07
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Frame = -3
Query: 197 DGIYAKGEKGYPGYPGF------NGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
D + KG+ G PG PG G+ GRKG RG QG G G+ G IGI+G ++G G
Sbjct: 161 DRLILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKG--EKGKTG 218
Query: 35 FKGFSGEK 12
KG SG K
Sbjct: 219 RKGDSGMK 226
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 66.5 bits (155), Expect = 5e-12
Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G G G G+ G G +GP G+ G DG+ KG G PGYPGF G G +G G
Sbjct: 1037 GPPGSPGDRGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRGPQGPPGIA 1096
Query: 107 GSDGYPGMGGDIGIQG 60
G G PG+GG IG G
Sbjct: 1097 GEPGPPGIGGGIGYMG 1112
Score = 51.2 bits (117), Expect = 2e-07
Identities = 42/112 (37%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = -3
Query: 329 GWP--GVTPDXPMA--FLFGQKGDMGLT----GEEGDKGEIGPPGETGESLIDGIYAKGE 174
GWP G T D M F+ Q + LT G G G +GPPG G G G
Sbjct: 993 GWPKAGDTVDQQMLDHFMISQILEQNLTLFYGGLMGRSGPVGPPGPPGSPGDRG--QTGV 1050
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G G G PG G+ G +G G PG G G +G QGP G G G
Sbjct: 1051 PGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRG--PQGPPGIAGEPG 1100
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 66.5 bits (155), Expect = 5e-12
Identities = 41/93 (44%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGE---IGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
G KGD G+TG EG KG+ GP G G++ I G +G KG G G G G GI G
Sbjct: 402 GPKGDTGITGPEGPKGDTGITGPEGPKGDTGITG--PQGPKGDTGITGPQGPKGDTGITG 459
Query: 113 DQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
QG G G GD G+QG G +G KG +G
Sbjct: 460 PQGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAG 492
Score = 66.1 bits (154), Expect = 7e-12
Identities = 42/100 (42%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
L G KGD G G +GD G GP G G++ I G +G KG G G G G GI G
Sbjct: 319 LSGLKGDTGQQGPKGDTGITGPQGPKGDTGITG--PEGPKGDTGITGPEGPKGDTGITGP 376
Query: 110 QGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEKEEK 3
QG G G+ G G +G T QGPKG G +G + K
Sbjct: 377 QGPKGDTGITGPQGPKGDTGITGPQGPKGDTGITGPEGPK 416
Score = 62.5 bits (145), Expect = 8e-11
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGE---IGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
G KGD G+TG +G KG+ GP G G++ I G +G KG G G G G GI G
Sbjct: 390 GPKGDTGITGPQGPKGDTGITGPEGPKGDTGITG--PEGPKGDTGITGPQGPKGDTGITG 447
Query: 113 DQGSDGYPGMGGDIGIQGTS----QQGPKGFKGFSGEKEEK 3
QG G G+ G G +G + QG +G +G++G + K
Sbjct: 448 PQGPKGDTGITGPQGPKGDTGNKGDQGVQGLRGYNGTQGAK 488
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 65.7 bits (153), Expect = 9e-12
Identities = 37/86 (43%), Positives = 45/86 (52%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G+TGE+GD G GP G G G +G G PG G GVPG KG +G G+ G+PG
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPG--PEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPG 69
Query: 86 MGGDIGIQGTSQQGPKGFKGFSGEKE 9
GD T GP G KG G ++
Sbjct: 70 SRGD-----TGDLGPPGAKGLPGAQQ 90
Score = 65.7 bits (153), Expect = 9e-12
Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKG--EIGPPGETGESLIDGIYAKGEKGYPGY 156
G PG P+ P A G G G G++G+ G GPPGE G + G KG+ G G
Sbjct: 480 GNPG--PNGP-AGATGPPGIPGFPGQKGEPGISRPGPPGENGAFGLPG--RKGDSGDRGP 534
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
G G+PG+KG +G G G PG GG +G QG QG KGFKG G+
Sbjct: 535 DGNPGLPGQKGDKGLLGPIGPPGRGG-VGSQGF--QGQKGFKGDPGD 578
Score = 65.7 bits (153), Expect = 9e-12
Identities = 37/79 (46%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG-IYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G KG+ G G G G GPPG G++ G I KGE G PG PGF G+ G G G
Sbjct: 956 GAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGIPGFPGLTGSSGRDGLD 1015
Query: 107 GSDGYPGMGGDIGIQGTSQ 51
GS G PG G IGI+ Q
Sbjct: 1016 GSPGRPGPSGRIGIRDKQQ 1034
Score = 64.1 bits (149), Expect = 3e-11
Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGS 102
+KG+ G TG GD+G IGPPG G + G PG G G G +G G+ G+
Sbjct: 186 KKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGA 245
Query: 101 DGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
DG G G G +G T G G KG G K E+
Sbjct: 246 DGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQ 279
Score = 64.1 bits (149), Expect = 3e-11
Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEI--GPPGETGESLIDGIY-AKGEKGYP 162
PG PG+ G+ GD G+ G++G G + GP G GE G + A G G P
Sbjct: 893 PGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPGPVDAGPRGPPGEPGPPGPFGAAGLDGMP 952
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT----SQQGPKGFKGFSG 18
G PG G G+ G+RG G G PG G G G + G G GF G
Sbjct: 953 GKPGAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGIPGFPG 1004
Score = 61.7 bits (143), Expect = 1e-10
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG--FNGVPGRKGI--- 120
G G+ GL G++GDKG +GP G G + +G+KG+ G PG G PG G+
Sbjct: 533 GPDGNPGLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQKGFKGDPGDAIPGNPGDPGVMGF 592
Query: 119 -----RGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 6
RG+ G G PG+ G G G GP+G G +G + E
Sbjct: 593 PGEPQRGEPGDPGRPGLPGQTGADGPPGMIGPRGPDGNNGPQGE 636
Score = 60.9 bits (141), Expect = 3e-10
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 90
G G +G +GE GP G GE DG+ G G G G +G PG+KG G +G G P
Sbjct: 223 GPPGPKGKRGETGPRGRPGEPGADGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQGVP 282
Query: 89 GMGGDIGIQGTSQQGPKGFKGFSGE 15
G G G+ P G G +G+
Sbjct: 283 GAKGQPGLDREEVVMPPGESGAAGD 307
Score = 60.5 bits (140), Expect = 3e-10
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G +G G GD G++GPPG G G G G PG G PG GI G G
Sbjct: 60 GAPGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNG 119
Query: 104 SDGYPGMGGDIGIQGTSQQ------GPKGFKGFSGEK 12
+ G G G +G +G GPKG G GEK
Sbjct: 120 AMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPGEK 156
Score = 60.1 bits (139), Expect = 4e-10
Identities = 39/106 (36%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG + L G G G G G GE G PG G+ G G +G PG PG
Sbjct: 879 GRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPGPVDAGPRGPPGEPG 938
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGE 15
G G G+ G G G G G G++G GP GF G +GE
Sbjct: 939 PPGPFGAAGLDGMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAGE 984
Score = 59.7 bits (138), Expect = 6e-10
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G+ G G G +G G G PG G S I+G+ KG+ G G PG NG+ G G G G
Sbjct: 300 GESGAAGDLGPDGPPGPKGAPGAPGFSGIEGL--KGQSGPLGDPGDNGIDGISGYPGVPG 357
Query: 104 SDGYPGMGGD----IGIQGTSQQGPKGFKGFSGE 15
G PG GD + + ++G G GF GE
Sbjct: 358 RKGDPGQKGDPPRFVPVPDHGEKGQSGEPGFPGE 391
Score = 59.3 bits (137), Expect = 8e-10
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNG 141
GVT + A G +G+MG G+ G +G G PGE G + G KG++G PG GF G
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPG--PKGKQGAPGTIGFPG 69
Query: 140 VPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G G+ G PG G+ G + GP G +G G
Sbjct: 70 SRGDTGDLGPPGAKGLPG-AQQYGLPGPLGEAGPPGSQGSPG 110
Score = 56.0 bits (129), Expect = 7e-09
Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPG------ETGESLIDGIYAKGEK 171
PG PG+ + G +G G G G G GPPG + GE I GE
Sbjct: 458 PGKPGLIGEQGAIGFKGLRGMTGNPGPNGPAGATGPPGIPGFPGQKGEPGISRPGPPGEN 517
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G PG G G +G G+ G G G G +G G +G G +GF G+K
Sbjct: 518 GAFGLPGRKGDSGDRGPDGNPGLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQK 570
Score = 55.6 bits (128), Expect = 9e-09
Identities = 36/92 (39%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG---IYAKGEKGYPGYPGFNGVPGRKGIRG 114
G G G GE+G KGE G PG G+ +D + GE G G G +G PG KG G
Sbjct: 262 GLDGAPGKKGEDGTKGEQGVPGAKGQPGLDREEVVMPPGESGAAGDLGPDGPPGPKGAPG 321
Query: 113 DQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G G+ G G G G G G SG
Sbjct: 322 APGFSGIEGLKGQSGPLG--DPGDNGIDGISG 351
Score = 55.2 bits (127), Expect = 1e-08
Identities = 41/115 (35%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLF-GQKGDMGLTGEEGDKGEIGPPGETGESLI---DGIYAKGEKGYP 162
G G P P+ + G KG G G+EG +G G G++G + DG+ G P
Sbjct: 399 GEKGNPPPTPIIIKYKGPKGTSGAQGKEGPRGPDGRDGQSGPKGLPGDDGLKGPPGDGLP 458
Query: 161 GYPGF---NGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G PG G G KG+RG G+ PG G G GP G GF G+K E
Sbjct: 459 GKPGLIGEQGAIGFKGLRGMTGN---PGPNGPAG-----ATGPPGIPGFPGQKGE 505
Score = 53.6 bits (123), Expect = 4e-08
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G G G GE G +G G PG G DG +GE G G PG G G KG +G
Sbjct: 223 GPPGPKGKRGETGPRGRPGEPGADGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQGVP 282
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G+ G PG+ + + + G G G G
Sbjct: 283 GAKGQPGLDREEVVMPPGESGAAGDLGPDG 312
Score = 53.6 bits (123), Expect = 4e-08
Identities = 39/109 (35%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG D P G+ G +GE G GEIG G GE K Y G G
Sbjct: 360 GDPGQKGDPPRFVPVPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIK-YKGPKG 418
Query: 149 FNGVPGRKGIRGDQGSDGY---PGMGGDIGIQGTSQQGPKGFKGFSGEK 12
+G G++G RG G DG G+ GD G++G G G G GE+
Sbjct: 419 TSGAQGKEGPRGPDGRDGQSGPKGLPGDDGLKGPPGDGLPGKPGLIGEQ 467
Score = 52.8 bits (121), Expect = 7e-08
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEI--GPPGETGESLIDGIYAKGEKGYPGYPGF------NGVPGR 129
G +G G G +GD G+ G PG+ G G +GE G PG PG +G PG
Sbjct: 562 GSQGFQGQKGFKGDPGDAIPGNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGADGPPGM 621
Query: 128 KGIRGDQGSDGYPGMGGDIGIQG 60
G RG G++G G GG GI+G
Sbjct: 622 IGPRGPDGNNGPQGEGGPNGIKG 644
Score = 52.0 bits (119), Expect = 1e-07
Identities = 39/108 (36%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRK---GIRG 114
G G +G+ G G KG+ GP G G+ GI G KG G PG G+PG + GI+G
Sbjct: 110 GAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPGEKGLPGVQGDPGIKG 169
Query: 113 -------------DQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 9
Q G PG G++G QG GP G G G K+
Sbjct: 170 PKAEPPFCPEGECPQPKKGEPGATGNVGDQGPI--GPPGRPGPKGPKD 215
Score = 51.2 bits (117), Expect = 2e-07
Identities = 42/122 (34%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG-------IYAKGE 174
PG PG + + G GD G G +G G G PG G+ G + GE
Sbjct: 320 PGAPGFSGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGE 379
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSD-------GYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
KG G PGF G G G +G++G+ Y G G G QG +GP G G SG
Sbjct: 380 KGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIKYKGPKGTSGAQGKEGPRGPDGRDGQSG 439
Query: 17 EK 12
K
Sbjct: 440 PK 441
Score = 48.8 bits (111), Expect = 1e-06
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGF------NGVPGRKGI------RGDQGSDGYPG 87
GPPG+ G KGE G G PGF NG+PG G+ RG G G PG
Sbjct: 861 GPPGDNGPR-----GKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPG 915
Query: 86 MGGDIGIQGTSQQGPKGFKGFSG 18
M GD G G GP+G G G
Sbjct: 916 MDGDKGPPGPVDAGPRGPPGEPG 938
Score = 48.0 bits (109), Expect = 2e-06
Identities = 40/109 (36%), Positives = 47/109 (43%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG+ D P G KG G GE+G G G PG G +GE P
Sbjct: 136 PGSPGI--DIP-----GPKGMDGPPGEKGLPGVQGDPGIKGPKAEPPFCPEGECPQPK-- 186
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G PG G GDQG G PG G G + T + P G G G++ E
Sbjct: 187 --KGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGE 233
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -3
Query: 248 GDKGEI-GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
G G I GPPG G+ I + +G PG PG +G G++G+ GD G G PG G
Sbjct: 1397 GPPGTISGPPGIRGDPGIPSVV----RGPPGKPGLSGNKGKEGLPGDDGVPGQPGPPGPP 1452
Query: 71 G 69
G
Sbjct: 1453 G 1453
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEI-GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
G G+ G+ G + GPPG+ G + G KG++G PG G G PG G GD
Sbjct: 1404 GPPGIRGDPGIPSVVRGPPGKPG---LSG--NKGKEGLPGDDGVPGQPGPPGPPGD 1454
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETG 210
PG P V P G+ G G G+EG G+ G PG+ G
Sbjct: 1412 PGIPSVVRGPP-----GKPGLSGNKGKEGLPGDDGVPGQPG 1447
Score = 25.8 bits (54), Expect = 8.8
Identities = 26/74 (35%), Positives = 27/74 (36%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG G KG+ G G G PG TG S G G G PG
Sbjct: 974 GPPGFDGQAGETGAIGFKGEPGTPGIPGF------PGLTGSS--------GRDGLDGSPG 1019
Query: 149 FNGVPGRKGIRGDQ 108
G GR GIR Q
Sbjct: 1020 RPGPSGRIGIRDKQ 1033
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 65.7 bits (153), Expect = 9e-12
Identities = 37/86 (43%), Positives = 45/86 (52%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G+TGE+GD G GP G G G +G G PG G GVPG KG +G G+ G+PG
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPG--PEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPG 69
Query: 86 MGGDIGIQGTSQQGPKGFKGFSGEKE 9
GD T GP G KG G ++
Sbjct: 70 SRGD-----TGDLGPPGAKGLPGAQQ 90
Score = 60.5 bits (140), Expect = 3e-10
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G +G G GD G++GPPG G G G G PG G PG GI G G
Sbjct: 60 GAPGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNG 119
Query: 104 SDGYPGMGGDIGIQGTSQQ------GPKGFKGFSGEK 12
+ G G G +G +G GPKG G GEK
Sbjct: 120 AMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPGEK 156
Score = 59.3 bits (137), Expect = 8e-10
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNG 141
GVT + A G +G+MG G+ G +G G PGE G + G KG++G PG GF G
Sbjct: 12 GVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPG--PKGKQGAPGTIGFPG 69
Query: 140 VPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G G+ G PG G+ G + GP G +G G
Sbjct: 70 SRGDTGDLGPPGAKGLPG-AQQYGLPGPLGEAGPPGSQGSPG 110
Score = 57.2 bits (132), Expect = 3e-09
Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGS 102
+KG+ G TG GD+G IGPPG G + G PG G G G +G G+ G+
Sbjct: 186 KKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGA 245
Query: 101 DGYPGMGGDIGIQG-TSQQGPKGFK 30
DG G G G +G T G G K
Sbjct: 246 DGVRGPDGSTGERGETGLDGAPGKK 270
Score = 52.0 bits (119), Expect = 1e-07
Identities = 39/108 (36%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRK---GIRG 114
G G +G+ G G KG+ GP G G+ GI G KG G PG G+PG + GI+G
Sbjct: 110 GAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPGEKGLPGVQGDPGIKG 169
Query: 113 -------------DQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 9
Q G PG G++G QG GP G G G K+
Sbjct: 170 PKAEPPFCPEGECPQPKKGEPGATGNVGDQGPI--GPPGRPGPKGPKD 215
Score = 48.0 bits (109), Expect = 2e-06
Identities = 38/109 (34%), Positives = 47/109 (43%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG+ P + G G+ GL G +GD G GP E +GE P
Sbjct: 136 PGSPGIDIPGPKG-MDGPPGEKGLPGVQGDPGIKGPKAEPP------FCPEGECPQPK-- 186
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G PG G GDQG G PG G G + T + P G G G++ E
Sbjct: 187 --KGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGE 233
Score = 32.3 bits (70), Expect = 0.10
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G+ G G GE G G GP G TGE +GE G G PG
Sbjct: 232 GETGPRGRPGEPGADGVRGPDGSTGE--------RGETGLDGAPG 268
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEK 171
G +G G G +G +G G GE GE+ +DG A G+K
Sbjct: 235 GPRGRPGEPGADGVRGPDGSTGERGETGLDG--APGKK 270
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 64.9 bits (151), Expect = 2e-11
Identities = 43/111 (38%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG D G KG GL GE G+ G GP G+ G+ + GE G G
Sbjct: 120 PGLPGKRGDRGTP---GAKGPPGLAGEPGEPGTQGPRGDPGD-----VGEPGEAGPSGRN 171
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
G NG G G+RG G+ G PG G G QG +G G +G GE+ K
Sbjct: 172 GANGTAGPPGVRGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGERGGK 222
Score = 64.9 bits (151), Expect = 2e-11
Identities = 43/105 (40%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGY 156
PG PG + G +GD G GE G G G PG GE G K GEKG+ G
Sbjct: 396 PGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQGERGPRGEQGKQGEKGHAGE 455
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 21
G +G PG G +G G G PG G+ G G+ GP G KG S
Sbjct: 456 GGADGAPGIPGEQGPMGPVGAPGPVGNAGSPGS--PGPSGPKGDS 498
Score = 63.7 bits (148), Expect = 4e-11
Identities = 41/98 (41%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP---GRKGI 120
L GQKGD G+ G+ G+ G G G G G Y GE+G PG PG +G P G +G
Sbjct: 386 LGGQKGDQGMPGKPGNPGAAGLRGAPGAR---GDY--GERGEPGAPGRDGAPGAQGERGP 440
Query: 119 RGDQGSDGYPGMGGDIGIQGT----SQQGPKGFKGFSG 18
RG+QG G G G+ G G +QGP G G G
Sbjct: 441 RGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAPG 478
Score = 58.4 bits (135), Expect = 1e-09
Identities = 32/80 (40%), Positives = 43/80 (53%)
Frame = -3
Query: 251 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
+G G G PG G+ G+ G+ G PG G G PG +G G++G G PG G
Sbjct: 375 QGRAGAPGSPGLGGQKGDQGM--PGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAP 432
Query: 71 GIQGTSQQGPKGFKGFSGEK 12
G QG ++GP+G +G GEK
Sbjct: 433 GAQG--ERGPRGEQGKQGEK 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = -3
Query: 242 KGEIGPPGETGESLID--GIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
+G IGPPG G+ +I GI G++G G PG G PG G G+ G+ G G GD+
Sbjct: 100 RGLIGPPGPPGKPVIRRVGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDV 159
Query: 71 GIQGTSQQGPKGFKGFSG 18
G G + GP G G +G
Sbjct: 160 GEPG--EAGPSGRNGANG 175
Score = 48.0 bits (109), Expect = 2e-06
Identities = 37/106 (34%), Positives = 43/106 (40%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PGV G G G G +G +G G G GE G +G +G G G
Sbjct: 178 GPPGVRGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGER--GGKGPQGSRGPVGPRG 235
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
NGVPG G GD G G G G G +G G G G G +
Sbjct: 236 ANGVPGSPGADGDTGEAGEHGADGLKGDRGA--DGLPGEDGIPGPR 279
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPG 219
PG PG D A G G G G +G GE G PG
Sbjct: 240 PGSPGADGDTGEAGEHGADGLKGDRGADGLPGEDGIPG 277
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 64.9 bits (151), Expect = 2e-11
Identities = 42/103 (40%), Positives = 52/103 (50%)
Frame = -3
Query: 311 PDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 132
P P F G +G +G G +GD G G G+TG + G A G KG G G +G G
Sbjct: 272 PQGPRGFN-GSEGPVGPKGLKGDPGLKGDKGDTGANGTAG--APGVKGDKGDTGASGAKG 328
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G++GD+G G G GD GIQG + G KG KG E K
Sbjct: 329 EAGVKGDKGDQGVMGAKGDQGIQGFN--GTKGEKGVGDLSECK 369
Score = 46.8 bits (106), Expect = 4e-06
Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYP 153
G PG+ D G G G+ G++GD G G GE G G G KG G
Sbjct: 292 GDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQ 351
Query: 152 GFNGVPGRKGIRGDQG--------SDGYPGMGGDIGIQGTSQQGPKGF 33
GFNG G KG+ GD PG+ G I+ T + K F
Sbjct: 352 GFNGTKGEKGV-GDLSECKFKIATGSSSPGVSGQSSIEVTEESDKKIF 398
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEE 6
+G +G G+ G G G KG++GD G G G G G G +G KG G SG K E
Sbjct: 270 EGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 329
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 63.3 bits (147), Expect = 5e-11
Identities = 39/87 (44%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G GE G G GPPG G DG A G G PG PG G PG G +GD G
Sbjct: 85 GPPGAPGPPGEPGQVGMAGPPGPPGHVGEDG--APGAPGAPGPPGSPGAPGLPGEKGDPG 142
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKG 27
G PG G G G QGP G G
Sbjct: 143 LQGAPGAAGLPGAPGLPGPQGPMGPPG 169
Score = 57.2 bits (132), Expect = 3e-09
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGY 156
PG PG + + G G G GE+G G G PG G G+ KG+ G G
Sbjct: 87 PGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGA 146
Query: 155 PGFNGVPGRKGIRGDQGSDGYPG 87
PG G+PG G+ G QG G PG
Sbjct: 147 PGAAGLPGAPGLPGPQGPMGPPG 169
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 63.3 bits (147), Expect = 5e-11
Identities = 38/88 (43%), Positives = 47/88 (53%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G GE G++GE G PG G AKG KG PG PG G PG +G G G G PG
Sbjct: 197 GPPGEPGERGEPGEPGAAG--------AKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVPG 248
Query: 86 MGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
+ G G +G +QG +G KG G+ E+
Sbjct: 249 LPGVKGDRG--EQGARGEKGEQGKTGER 274
Score = 61.3 bits (142), Expect = 2e-10
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G+ G+ G G +G KG+ GPPG GE +G G G PG PG G G +G RG++
Sbjct: 206 GEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVPGLPGVKGDRGEQGARGEK 265
Query: 107 GSDGYPGMGGDIGIQGTSQQ 48
G G G G +G G Q
Sbjct: 266 GEQGKTGERGPVGEAGRPGQ 285
Score = 58.4 bits (135), Expect = 1e-09
Identities = 31/69 (44%), Positives = 37/69 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
GQ G GL GE G +GE GP G TG + G+ KG++G G G G G+ G RG G
Sbjct: 221 GQPGPPGLVGEPGPEGEPGPVGPTGVPGLPGV--KGDRGEQGARGEKGEQGKTGERGPVG 278
Query: 104 SDGYPGMGG 78
G PG G
Sbjct: 279 EAGRPGQNG 287
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = -3
Query: 254 EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
E D+ E E SL + + + E+ +PG PG+ G PG+ GD G +G PG G
Sbjct: 905 EPWDRQETQEARELPASL-ENLVTQEEREHPGDPGYTGKPGK---YGDDGLEGSPGPRGP 960
Query: 74 IGIQGTSQQGPKGFKGFSG 18
IG QG GP+G +G SG
Sbjct: 961 IGPQG--DPGPEGERGQSG 977
Score = 46.0 bits (104), Expect = 8e-06
Identities = 29/65 (44%), Positives = 31/65 (47%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 51
GPPG+ G KG KG PG G G PG +G RG GSDG G G G G
Sbjct: 102 GPPGDPGP--------KGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPI- 152
Query: 50 QGPKG 36
GP G
Sbjct: 153 -GPPG 156
Score = 44.0 bits (99), Expect = 3e-05
Identities = 44/137 (32%), Positives = 54/137 (39%), Gaps = 28/137 (20%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPG------ETGES-----LIDGIY- 186
G PG D G G G G G G IGPPG +T + LI I
Sbjct: 120 GRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGPPGPILDYNDTSGAGPDPILIGSIVR 179
Query: 185 ---AKGE---------KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ-- 48
+KG +G PG PG G PG G G +G+ G PG G +G G +
Sbjct: 180 SRDSKGPGAGGIIAEIQGPPGEPGERGEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGEPG 239
Query: 47 --GPKGFKGFSGEKEEK 3
GP G G G K ++
Sbjct: 240 PVGPTGVPGLPGVKGDR 256
Score = 43.2 bits (97), Expect = 5e-05
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETG 210
PG PGV D G+KG+ G TGE G GE G PG+ G
Sbjct: 247 PGLPGVKGDRGEQGARGEKGEQGKTGERGPVGEAGRPGQNG 287
Score = 35.9 bits (79), Expect = 0.008
Identities = 25/65 (38%), Positives = 29/65 (44%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG + L G KGD G G G+KGE G GE +G G G PG
Sbjct: 236 GEPGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGE-----------RGPVGEAGRPG 284
Query: 149 FNGVP 135
NG+P
Sbjct: 285 QNGLP 289
Score = 32.7 bits (71), Expect = 0.076
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES 204
PG G T + + G +G+ G GE+G++G+ G G GE+
Sbjct: 238 PGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGERGPVGEA 280
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG T G +G G G G +G+ GP GE G+S G G PG P
Sbjct: 934 PGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQS--------GPPGPPGPP 985
Query: 152 G 150
G
Sbjct: 986 G 986
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 62.5 bits (145), Expect = 8e-11
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGR-------- 129
G G GL G G G +G PG G + +G + G G PG PG NG+ G
Sbjct: 131 GMPGRNGLDGRPGMDGPMGMPGRDGTNGKEG--SPGPPGAPGPPGVNGLQGLQGERGPIG 188
Query: 128 -KGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGEKEEK 3
KG+ GD+G G PG GD G G S + G G +G +G K EK
Sbjct: 189 PKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRKGEK 232
Score = 60.5 bits (140), Expect = 3e-10
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYP 153
G PG+ D PM G G G G+EG G G PG G + + G+ +G G G
Sbjct: 140 GRPGM--DGPM----GMPGRDGTNGKEGSPGPPGAPGPPGVNGLQGLQGERGPIGPKGLM 193
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKG 27
G GV G G +GD+G G G G+ G +G T ++G KG KG
Sbjct: 194 GDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRKGEKGDKG 236
Score = 53.2 bits (122), Expect = 5e-08
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = -3
Query: 248 GDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
G +G G PG G + +DG PG G G+PGR G G +GS G PG G G
Sbjct: 122 GPRGPAGSPGMPGRNGLDG--------RPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPG 173
Query: 68 IQG----TSQQGPKGFKGFSGEK 12
+ G ++GP G KG G+K
Sbjct: 174 VNGLQGLQGERGPIGPKGLMGDK 196
Score = 53.2 bits (122), Expect = 5e-08
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G G GL G +G++G IGP G G+ + G+ KG++G G G NG PG +G G +
Sbjct: 170 GPPGVNGLQGLQGERGPIGPKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRK 229
Query: 107 GSDGYPGM 84
G G G+
Sbjct: 230 GEKGDKGV 237
Score = 48.0 bits (109), Expect = 2e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG + L G++G +G G GDKG G PG G+ G+ G G P
Sbjct: 166 PGAPGPPGVNGLQGLQGERGPIGPKGLMGDKGVQGLPGPKGDRGPTGL-----SGENGEP 220
Query: 152 GFNGVPGRKGIRGDQG 105
G G GRKG +GD+G
Sbjct: 221 GARGDTGRKGEKGDKG 236
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 188 YAKGEKGYPGYPGF---NGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFS 21
Y+ G +G G PG NG+ GR G+ G G G G G G G GP G G
Sbjct: 119 YSTGPRGPAGSPGMPGRNGLDGRPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPGVNGLQ 178
Query: 20 GEKEEK 3
G + E+
Sbjct: 179 GLQGER 184
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 62.5 bits (145), Expect = 8e-11
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G GD G G+ G +G G PG G + G + G+ G G PG G+PG G +GD
Sbjct: 285 GITGDRGAQGKTGKQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPGKQGLPGESGAQGDS 344
Query: 107 GSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGE 15
G +G G GD G+ G +G +G +G SG+
Sbjct: 345 GDEGDGGAKGDKGVFGGVGLDGAEGEQGARGKSGD 379
Score = 60.9 bits (141), Expect = 3e-10
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYP 153
G GV + + G+ G G+ G G KG +G PG G G+ G G PG P
Sbjct: 100 GPAGVAGERGLPGGLGETGQQGMLGPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQPGLP 159
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G +GVPG G G G G G GD G +G ++G G +G G
Sbjct: 160 GRDGVPGTVGESGPPGPAGPIGAVGDSGPRG--ERGELGIRGNKG 202
Score = 60.5 bits (140), Expect = 3e-10
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
GQ G G G++G GE G G++G+ G AKG+KG G G +G G +G RG G
Sbjct: 321 GQPGRQGEPGKQGLPGESGAQGDSGDEGDGG--AKGDKGVFGGVGLDGAEGEQGARGKSG 378
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G G G +G G QGP G +G G +
Sbjct: 379 DFGPIGPPGPLGPPGDRGMQGPVGLRGTVGAR 410
Score = 59.7 bits (138), Expect = 6e-10
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
+F KGD G G +G G+ G G+ G A G+ G G PG G PG G G
Sbjct: 226 VFDFKGDSGDGGSDGKAGKEGKAGDRG--------AIGKTGNAGLPGSTGAPGAAGSDGS 277
Query: 110 QGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G+ GD G QG T +QGP G G G
Sbjct: 278 VGKQGRKGITGDRGAQGKTGKQGPTGTPGTVG 309
Score = 53.2 bits (122), Expect = 5e-08
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G PG + L G+ G G +G+EGD G G G G +DG A+GE+G G G
Sbjct: 321 GQPGRQGEPGKQGLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDG--AEGEQGARGKSG 378
Query: 149 -FN--GVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 51
F G PG G GD+G G G+ G +G + TS+
Sbjct: 379 DFGPIGPPGPLGPPGDRGMQGPVGLRGTVGARWTSE 414
Score = 51.2 bits (117), Expect = 2e-07
Identities = 29/75 (38%), Positives = 38/75 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G GD G+ G +G G+ G PG G + G GE G PG G G G G RG++G
Sbjct: 139 GPPGDAGMQGSDGANGQPGLPGRDG---VPGTV--GESGPPGPAGPIGAVGDSGPRGERG 193
Query: 104 SDGYPGMGGDIGIQG 60
G G G +G++G
Sbjct: 194 ELGIRGNKGPVGVEG 208
Score = 41.5 bits (93), Expect = 2e-04
Identities = 34/93 (36%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G +G G G+ G G G PG GES G G G G G G G GIRG++G
Sbjct: 145 GMQGSDGANGQPGLPGRDGVPGTVGESGPPG--PAGPIGAVGDSGPRGERGELGIRGNKG 202
Query: 104 SDGYPGMGGDIGIQGTSQQGPKG---FKGFSGE 15
G G I I +Q FKG SG+
Sbjct: 203 PVGVEGPRFSIRIVLHAQYSSVAVFDFKGDSGD 235
Score = 39.9 bits (89), Expect = 5e-04
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 22/128 (17%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG--------IYA--- 183
G PG + G G +G +G G++GE+G G G ++G ++A
Sbjct: 163 GVPGTVGESGPPGPAGPIGAVGDSGPRGERGELGIRGNKGPVGVEGPRFSIRIVLHAQYS 222
Query: 182 -------KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS----QQGPKG 36
KG+ G G G G G+ G RG G G G+ G G G + G +G
Sbjct: 223 SVAVFDFKGDSGDGGSDGKAGKEGKAGDRGAIGKTGNAGLPGSTGAPGAAGSDGSVGKQG 282
Query: 35 FKGFSGEK 12
KG +G++
Sbjct: 283 RKGITGDR 290
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 59.7 bits (138), Expect = 6e-10
Identities = 43/111 (38%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-----KGEKG 168
PG PG+ P P G KG G G G G++GPPG G G + +G G
Sbjct: 294 PGPPGL-PGAP-----GPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNG 347
Query: 167 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
PG PG NG PG G G G G PG G G GPKG G +G
Sbjct: 348 QPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG 398
Score = 58.8 bits (136), Expect = 1e-09
Identities = 41/111 (36%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGY 165
PG PG+ + G +G GL G G G GPPG+ G + G G G
Sbjct: 157 PGGPGLQGNHGNPA--GIQGPNGLPGPNGPLGPPGPPGDMGPPGLPGPQGPQMPPGPPGL 214
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT--SQQGPKGFKGFSG 18
PG PG G PG G G G G PG G G QG + GP+G G G
Sbjct: 215 PGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGLPG 265
Score = 58.8 bits (136), Expect = 1e-09
Identities = 36/91 (39%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
GQ G G+ G G G++GPPG G G G PG PG G PG G G G
Sbjct: 347 GQPGPPGINGPPGPLGDVGPPGLPGPP--GPQMPPGPPGLPGAPGPKGPPGTNGPLGPPG 404
Query: 104 SDGYPGMGGDIGIQGT--SQQGPKGFKGFSG 18
G PG G G QG + GP+G G G
Sbjct: 405 DVGPPGNPGGPGYQGNHGNPAGPQGPNGQPG 435
Score = 57.6 bits (133), Expect = 2e-09
Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLF--GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 159
PG+ G P P + G G G+ G G+ G++GPPG G G G PG
Sbjct: 75 PGFQG-PPGNPAGAIGPPGLPGPNGVNGPPGELGDMGPPGPPGPP--GPQMPPGPPGLPG 131
Query: 158 YPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
PG G PG G G G G PG G G+QG + P G +G +G
Sbjct: 132 PPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQG-NHGNPAGIQGPNG 177
Score = 57.2 bits (132), Expect = 3e-09
Identities = 42/111 (37%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-----KGEKG 168
PG PG+ P P G G G+ G G GE GPPG G G + +G G
Sbjct: 549 PGPPGL-PGAP-----GPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNG 602
Query: 167 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
PG PG NG PG G G G G PG G GPKG G +G
Sbjct: 603 QPGPPGVNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPGPKGPPGPNG 653
Score = 56.4 bits (130), Expect = 5e-09
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGI----YAKGEKGYPGYPGFNGVPGRKGIR 117
G +G GL G G G GPPG+ G + G G G PG PG G PG G
Sbjct: 256 GPQGPNGLPGPNGILGPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPL 315
Query: 116 GDQGSDGYPGMGGDIGIQGT--SQQGPKGFKGFSG 18
G G G PG G G QG + GP+G G G
Sbjct: 316 GPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPG 350
Score = 54.4 bits (125), Expect = 2e-08
Identities = 43/111 (38%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = -3
Query: 332 PGWPG-VTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES-LIDGIYAKGEKGYP- 162
PG PG +P P G G G G G G +GPPGE G + G+ +G G P
Sbjct: 710 PGPPGPASPPSPP----GPPGPPGPNGPPGPNGPLGPPGECGPAGNAGGVGCQGHHGNPA 765
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G G NG PG GI G G G G G G G S P G G G K
Sbjct: 766 GSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPK 816
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/95 (37%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-----AKGEKGYPGYPGFNGVPGRKGI 120
G KG G G G GE GP G G G + ++G G PG PG NG PG+ G
Sbjct: 814 GPKGPPGPNGPLGPPGECGPAGNAGGVGCQGNHGNPAGSQGPNGQPGPPGINGPPGQVGE 873
Query: 119 RGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G PG G GPKG G +G
Sbjct: 874 MGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNG 908
Score = 54.0 bits (124), Expect = 3e-08
Identities = 43/112 (38%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = -3
Query: 332 PGWPG-VTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES-LIDGIYAKGEKGYP- 162
PG PG +P P G G G G G G +GPPGE+G + G+ +G G P
Sbjct: 625 PGPPGPASPPSPP----GPPGPPGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPA 680
Query: 161 GYPGFNGVPGRKGIRGDQGSDGY---PGMGGDIG-IQGTSQQGPKGFKGFSG 18
G G NG PG GI G G G PG+ G G S GP G G +G
Sbjct: 681 GVQGPNGQPGPPGINGPPGQIGEMGPPGLPGPPGPASPPSPPGPPGPPGPNG 732
Score = 54.0 bits (124), Expect = 3e-08
Identities = 43/111 (38%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = -3
Query: 332 PGWPG-VTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES-LIDGIYAKGEKGYP- 162
PG PG +P P G G G G G G +GPPGE G + G+ +G G P
Sbjct: 795 PGPPGPASPPSPP----GPPGPPGPKGPPGPNGPLGPPGECGPAGNAGGVGCQGNHGNPA 850
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G G NG PG GI G G G G G G G S P G G G K
Sbjct: 851 GSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPK 901
Score = 53.6 bits (123), Expect = 4e-08
Identities = 38/98 (38%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPG---ETGESLIDGIY----AKGEKGYPGYPGFNGVPGRK 126
GQ G G+ G G G++GPPG G + G A G G PG G G PG
Sbjct: 432 GQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEA 491
Query: 125 GIRGDQGSDGYPG-MGGDIGIQG-TSQQGPKGFKGFSG 18
G G+ G GY G G G QG Q GP G G G
Sbjct: 492 GPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPG 529
Score = 51.2 bits (117), Expect = 2e-07
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-----KGEKGYPGYPGFNGVPGRKGI 120
G KG G G G GE GP G G G + +G G PG PG NG PG+ G
Sbjct: 644 GPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGPNGQPGPPGINGPPGQIGE 703
Query: 119 RGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G PG G GP G G +G
Sbjct: 704 MGPPGLPGPPGPASPPSPPGPPGPPGPNGPPGPNG 738
Score = 50.8 bits (116), Expect = 3e-07
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -3
Query: 284 GQKGDMGL-TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G +G+ G G +G G+ GPPG G + G G PG PG PG G+ G
Sbjct: 416 GYQGNHGNPAGPQGPNGQPGPPGINGPP--GPLGDVGPPGLPGPPGPQMPPGPPGLPGAP 473
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G +G PG+ G +G G + GP G G G
Sbjct: 474 GPNGPPGINGPLGPPG--EAGPPGNPGGPG 501
Score = 50.8 bits (116), Expect = 3e-07
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -3
Query: 284 GQKGDMGL-TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G +G+ G G +G G+ GPPG G + G G PG PG PG G+ G
Sbjct: 501 GYQGNHGNPAGPQGPNGQPGPPGINGPP--GPLGDVGPPGLPGPPGPQMPPGPPGLPGAP 558
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G +G PG+ G +G G + GP G G G
Sbjct: 559 GPNGPPGINGPLGPPG--EAGPPGNPGGPG 586
Score = 36.3 bits (80), Expect = 0.006
Identities = 22/54 (40%), Positives = 24/54 (44%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G PG+PG G G KG G G G PG G G GP G G +G
Sbjct: 46 GPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPG-NPAGAIGPPGLPGPNG 98
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 332 PGWPG-VTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETG 210
PG PG +P P G G G G G G +GPPG+ G
Sbjct: 880 PGPPGPASPPSPP----GPPGPPGPKGPPGPNGCLGPPGDAG 917
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 59.7 bits (138), Expect = 6e-10
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQ 108
G KGD G TG G KG+ G G TG G G G G G G G G +GD
Sbjct: 4 GPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDT 63
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G+ G G GD G G + GPKG G +G K
Sbjct: 64 GATGPTGPKGDTGATGPT--GPKGDTGATGPNGPK 96
Score = 57.6 bits (133), Expect = 2e-09
Identities = 38/93 (40%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG---YPGYPGFNGVPGRKGIRG 114
G KGD G TG G KG+ G G G + G KG+ G G G G G G +G
Sbjct: 82 GPKGDTGATGPNGPKGDTGATGPAGPTGPTG--PKGDTGPTDPTGPNGDTGATGPTGPKG 139
Query: 113 DQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
D G+ G G GD G G T GPKG G +G
Sbjct: 140 DTGATGPTGPKGDTGATGPTGPTGPKGDTGATG 172
Score = 56.4 bits (130), Expect = 5e-09
Identities = 36/92 (39%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KGD G TG G G GP G+TG + D G+ G G G G G G G +G
Sbjct: 94 GPKGDTGATGPAGPTGPTGPKGDTGPT--DPTGPNGDTGATGPTGPKGDTGATGPTGPKG 151
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G G G G +G T GP G G +G K
Sbjct: 152 DTGATGPTGPTGPKGDTGATGPAGPTGPTGPK 183
Score = 52.8 bits (121), Expect = 7e-08
Identities = 35/90 (38%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KGD G TG G G GP G+TG + G G G G G G G G
Sbjct: 163 GPKGDTGATGPAGPTGPTGPKGDTGAT-----GPAGPAGPTGPKGDTGATGPTDPTGPTG 217
Query: 104 SDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G+IG G T GPKG G +G
Sbjct: 218 PKGPTGPKGEIGATGPTDPTGPKGDTGATG 247
Score = 52.0 bits (119), Expect = 1e-07
Identities = 34/89 (38%), Positives = 40/89 (44%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G TG +GD G GP G G++ G G G G G G G GD G
Sbjct: 73 GDTGATGPTGPKGDTGATGPNGPKGDTGATG--PAGPTGPTGPKGDTGPTDPTGPNGDTG 130
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
+ G G GD G G + GPKG G +G
Sbjct: 131 ATGPTGPKGDTGATGPT--GPKGDTGATG 157
Score = 51.2 bits (117), Expect = 2e-07
Identities = 33/81 (40%), Positives = 38/81 (46%)
Frame = -3
Query: 260 TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
TG +GD G GP G G++ G G KG G G G G KG G G G G
Sbjct: 3 TGPKGDTGATGPTGPKGDTGATG--PTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPK 60
Query: 80 GDIGIQGTSQQGPKGFKGFSG 18
GD G G + GPKG G +G
Sbjct: 61 GDTGATGPT--GPKGDTGATG 79
Score = 50.8 bits (116), Expect = 3e-07
Identities = 33/82 (40%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KGD G TG G G GP G+TG + G KG G G G G G +GD G
Sbjct: 238 GPKGDTGATGPTGPTGPTGPKGDTGAT-----GPTGPKGDTGATGPAGPTGPTGPKGDTG 292
Query: 104 SDGYPGMGGDIGIQG-TSQQGP 42
+ G G G G +G T GP
Sbjct: 293 ATGPAGPTGPTGPKGDTGATGP 314
Score = 48.4 bits (110), Expect = 1e-06
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G TG +GD G GP G TG + G KG G G G G G G G
Sbjct: 229 GATGPTDPTGPKGDTGATGPTGPTGPT--------GPKGDTGATGPTGPKGDTGATGPAG 280
Query: 104 SDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 18
G G GD G G T GPKG G +G
Sbjct: 281 PTGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 313
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 58.8 bits (136), Expect = 1e-09
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
G EGD+G IG PG +G I AKG G G G G G KG G+ GS G PG+ G
Sbjct: 2 GLEGDRGPIGKPGVSGTK--GNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGVPG 59
Query: 77 DIGIQG-TSQQGPKGFKGFSG 18
++G G QG +G +G +G
Sbjct: 60 EVGKPGPIGYQGREGSEGSTG 80
Score = 58.8 bits (136), Expect = 1e-09
Identities = 32/75 (42%), Positives = 42/75 (56%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KG +GL G+ G++G GP G GE G KG PG PG G PG G +G +G
Sbjct: 23 GAKGRIGLQGDRGEQGPFGPKGAGGEM--------GSKGPPGVPGEVGKPGPIGYQGREG 74
Query: 104 SDGYPGMGGDIGIQG 60
S+G G+ G G++G
Sbjct: 75 SEGSTGVYGMKGMKG 89
Score = 58.0 bits (134), Expect = 2e-09
Identities = 38/91 (41%), Positives = 46/91 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G +GD G+ G +G +G +GP G G G G KG PG G+ G G+ G RG QG
Sbjct: 221 GVQGDDGIRGPQGKQGGVGPTGGHGPPGPMG--EPGRKGSPGDIGYVGPKGKLGDRGPQG 278
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G G+ G G G S G KG G GEK
Sbjct: 279 PVGIKGIRGASGPIGDS--GIKGGYGLMGEK 307
Score = 56.4 bits (130), Expect = 5e-09
Identities = 43/102 (42%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -3
Query: 311 PDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYPGYPGFN 144
PD + G+KG G TG G +G G G G+ I G K G G G PG
Sbjct: 191 PDDGLKAKDGEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPM 250
Query: 143 GVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G PGRKG GD G G G GD G QG G KG +G SG
Sbjct: 251 GEPGRKGSPGDIGYVGPKGKLGDRGPQG--PVGIKGIRGASG 290
Score = 51.6 bits (118), Expect = 2e-07
Identities = 36/88 (40%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGY 156
PG G D G+ GD G G G KG G G G+S I G Y GEKG G
Sbjct: 253 PGRKGSPGDIGYVGPKGKLGDRGPQGPVGIKGIRGASGPIGDSGIKGGYGLMGEKGTAGR 312
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
G G G G GD G G PG G+I
Sbjct: 313 LGERGKKGPFGSIGDMGPPGEPGKPGEI 340
Score = 50.4 bits (115), Expect = 4e-07
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGE-SLIDGIYAKGEKGYPGYP 153
G GV D + G++G +G TG G G +G PG G I + KG+ G G
Sbjct: 218 GRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGEPGRKGSPGDIGYVGPKGKLGDRGPQ 277
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKG 27
G G+ G +G G G G G G +G +GT+ + G +G KG
Sbjct: 278 GPVGIKGIRGASGPIGDSGIKGGYGLMGEKGTAGRLGERGKKG 320
Score = 41.5 bits (93), Expect = 2e-04
Identities = 28/64 (43%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 197 DGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG-MGGDIGIQGTSQQGPKGFKGF 24
DG+ AK GEKG G G G G +G G QG DG G G G+ T GP G G
Sbjct: 193 DGLKAKDGEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGE 252
Query: 23 SGEK 12
G K
Sbjct: 253 PGRK 256
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 58.4 bits (135), Expect = 1e-09
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETG-------ESLIDGI---YA-KGEKGYPGYPGFNGV 138
G GD GL G G G+ GP G G +++I I Y KG++G PG G G+
Sbjct: 214 GAPGDPGLYGPPGPPGKKGPKGPKGRTAILPNKAMIGAIPPFYGPKGDRGVPGRQGMYGL 273
Query: 137 PGRKGIRGDQGSDGYPGMGGDIGIQGTS 54
G G +GDQG+ G PG+ G G QG S
Sbjct: 274 RGPPGRKGDQGTRGPPGLNGPTGAQGDS 301
Score = 51.6 bits (118), Expect = 2e-07
Identities = 37/106 (34%), Positives = 48/106 (45%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G+PG D + G++G G G EG+ G GPPG G + ++ E G
Sbjct: 135 GFPGTPGDQGRQGVPGKRGYDGAKGREGEDGANGPPGSPGSANMNWKQCVFELELNKQNG 194
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
+ G+R QGS G PG GD G+ G GP G KG G K
Sbjct: 195 IIYLEENCGMR-FQGSKGTPGAPGDPGLYG--PPGPPGKKGPKGPK 237
Score = 47.2 bits (107), Expect = 3e-06
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 308 DXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPG 132
D P+ L + + G+ G +G++G GP G G + G G++G G PG G G
Sbjct: 97 DVPIKMLQSCELNNGIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDG 156
Query: 131 RKGIRGDQGSDGYPGMGG 78
KG G+ G++G PG G
Sbjct: 157 AKGREGEDGANGPPGSPG 174
Score = 46.0 bits (104), Expect = 8e-06
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGI---RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
KG +G+PG G +G+PG KG GDQG G PG G G +G ++G G G G
Sbjct: 116 KGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKG--REGEDGANGPPG 171
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGE 15
G G G G PG G+ G G G+PG GD G QG ++G G KG GE
Sbjct: 111 GIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGE 163
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = -3
Query: 287 FGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
+G KGD G+ G +G G GPPG KG++G G PG NG G Q
Sbjct: 256 YGPKGDRGVPGRQGMYGLRGPPGR-----------KGDQGTRGPPGLNGPTGA------Q 298
Query: 107 GSDGYPG 87
G G+PG
Sbjct: 299 GDSGFPG 305
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 57.6 bits (133), Expect = 2e-09
Identities = 38/89 (42%), Positives = 46/89 (51%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G +G G+TGE G +GE G G G G KGEKGY G G G G +G +G +G
Sbjct: 4 GDQGATGITGEVGKEGEQGVKGARG-----GGGVKGEKGYRGELGKVGPSGPQGRKGFKG 58
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G PG+ G+ G QG G G GF G
Sbjct: 59 EPGPPGLPGEQGPQG-KFGGLLGDGGFGG 86
Score = 48.8 bits (111), Expect = 1e-06
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGR-KGIRGDQ 108
G +G G+ GE+G +GE+G G +G G KGE G PG PG G G+ G+ GD
Sbjct: 25 GARGGGGVKGEKGYRGELGKVGPSGPQGRKGF--KGEPGPPGLPGEQGPQGKFGGLLGDG 82
Query: 107 GSDGYPGMGGDIGIQGTSQ 51
G G G +Q Q
Sbjct: 83 GFGGASHGGEMAAVQSEEQ 101
Score = 45.6 bits (103), Expect = 1e-05
Identities = 34/95 (35%), Positives = 45/95 (47%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G G+T + G KG G G +G+KG G G+ G S +G KG+ G PG
Sbjct: 7 GATGITGEVGKEGEQGVKGARGGGGVKGEKGYRGELGKVGPS-----GPQGRKGFKGEPG 61
Query: 149 FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQG 45
G+PG +G +G G G+ GD G G S G
Sbjct: 62 PPGLPGEQGPQGKFG-----GLLGDGGFGGASHGG 91
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/56 (44%), Positives = 29/56 (51%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
+G G G G G G KG RG G G G G++G G S GP+G KGF GE
Sbjct: 6 QGATGITGEVGKEGEQGVKGARGGGGVKGEKGYRGELGKVGPS--GPQGRKGFKGE 59
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 57.6 bits (133), Expect = 2e-09
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRK---GI 120
L G KGD G G G+ G +GP G G++ KG++G G G+NG G + GI
Sbjct: 192 LSGLKGDTGPQGPRGNTGIMGPKGPKGDT-----GNKGDQGVQGLRGYNGTQGPRGNTGI 246
Query: 119 RGDQGSDGYPGMGGDIGIQGTS----QQGPKGFKGFSGEKEEK 3
G QG G G+ G G +G + QG +G +G++G + K
Sbjct: 247 MGPQGPKGDTGITGPKGPKGDTGNKGDQGVQGLRGYNGTQGAK 289
Score = 45.2 bits (102), Expect = 1e-05
Identities = 32/81 (39%), Positives = 36/81 (44%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G G D + L G G G G G G GP G+TG I G KG KG G G
Sbjct: 218 GDTGNKGDQGVQGLRGYNGTQGPRGNTGIMGPQGPKGDTG---ITG--PKGPKGDTGNKG 272
Query: 149 FNGVPGRKGIRGDQGSDGYPG 87
GV G +G G QG+ G G
Sbjct: 273 DQGVQGLRGYNGTQGAKGEAG 293
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 56.0 bits (129), Expect = 7e-09
Identities = 34/81 (41%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGF-NGVPGRKGIRGDQ 108
G G MGL G +G G GPPG G G +G PGYPG G PGR G G
Sbjct: 1674 GPDGPMGLPGPQGPDGPKGPPGPPG--------LPGPQGIPGYPGAPAGPPGRDGPMGPP 1725
Query: 107 GSDGYPGMGGDIGIQGTSQQG 45
G G G GD+G G G
Sbjct: 1726 GPSGGQGPPGDMGSMGPMGMG 1746
Score = 55.6 bits (128), Expect = 9e-09
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP-GYPGFNGVPGRKGIRGDQ 108
G G GL G +G KG GPPG G I KG G P G PG +G PG G +G +
Sbjct: 1780 GVDGPPGLAGPQGPKGMPGPPGPPGPP--GAIGWKGNPGNPAGPPGLDGPPGPPGPQGPK 1837
Query: 107 GSDGYPGMGGDIGIQG-----TSQQGPKGFKGFSG 18
G G PG G G G + GP G G G
Sbjct: 1838 GWPGVPGPPGPPGAYGWKGYPGNPAGPPGRDGIPG 1872
Score = 52.0 bits (119), Expect = 1e-07
Identities = 38/92 (41%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP- 153
GW G P P A G G G G +G KG G PG G G Y G KGYPG P
Sbjct: 1810 GWKG-NPGNP-AGPPGLDGPPGPPGPQGPKGWPGVPGPPGPP---GAY--GWKGYPGNPA 1862
Query: 152 ---GFNGVPGRKGIRGDQGSDGYPGMGGDIGI 66
G +G+PG G +G +G G PG+ G G+
Sbjct: 1863 GPPGRDGIPGPPGRQGGKGPAGIPGIPGPGGV 1894
Score = 42.7 bits (96), Expect = 7e-05
Identities = 42/125 (33%), Positives = 47/125 (37%), Gaps = 20/125 (16%)
Frame = -3
Query: 332 PGWPGVTPDXP-MAFLFGQKGDMGLTGEEGDKGEIGPPGETGE--------SLIDGIYA- 183
PG+PG P G G G G GD G +GP G GE S G Y
Sbjct: 1706 PGYPGAPAGPPGRDGPMGPPGPSGGQGPPGDMGSMGPMGMGGEHKDFKRSASAQVGQYGY 1765
Query: 182 ----------KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 33
+G G G PG G G KG+ G G G PG G G G + GP G
Sbjct: 1766 PSQAASYIGTQGASGVDGPPGLAGPQGPKGMPGPPGPPGPPGAIGWKGNPG-NPAGPPGL 1824
Query: 32 KGFSG 18
G G
Sbjct: 1825 DGPPG 1829
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGL-TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
GWPGV +G KG G G G G GPPG G KG G PG P
Sbjct: 1838 GWPGVPGPPGPPGAYGWKGYPGNPAGPPGRDGIPGPPGRQG--------GKGPAGIPGIP 1889
Query: 152 GFNGVPGRK 126
G GV R+
Sbjct: 1890 GPGGVGKRR 1898
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -3
Query: 227 PPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGM-GGDIGIQG-TS 54
PP G DG G G G G G PG G+ G QG GYPG G G G
Sbjct: 1666 PPPAPGPPGPDG--PMGLPGPQGPDGPKGPPGPPGLPGPQGIPGYPGAPAGPPGRDGPMG 1723
Query: 53 QQGPKGFKGFSGE 15
GP G +G G+
Sbjct: 1724 PPGPSGGQGPPGD 1736
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSP 180
P LPG PGYPG P P
Sbjct: 1697 PGLPGPQGIPGYPGAPAGP 1715
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 55.6 bits (128), Expect = 9e-09
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G+ G G G+EG +G+ G PG G G+ G G PG G G+PG KG +GD
Sbjct: 120 GRTGAKGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDP 179
Query: 107 GSDGYPGMGGDIGIQG 60
G G G+ G G G
Sbjct: 180 GKQGLTGLTGAPGSPG 195
Score = 52.8 bits (121), Expect = 7e-08
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KGD G G++G G G PG G L K G P F +PG+ G +G +G
Sbjct: 171 GMKGDKGDPGKQGLTGLTGAPGSPG--LPGNCINKSNVGSVASPSFYCLPGKLGPQGPKG 228
Query: 104 SDGYPGMGGDIGIQG----TSQQGPKGFKGFSGE 15
+ G G GD GI G GP G +G G+
Sbjct: 229 ARGITGPKGDAGITGPKGTPGDPGPTGSRGRPGK 262
Score = 49.6 bits (113), Expect = 6e-07
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G++G GL G +G G G PG G G G G PG G G PG++G+ G G
Sbjct: 132 GKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKI--GLPGIPGMKGDKGDPGKQGLTGLTG 189
Query: 104 SDGYPGMGG------DIG---------IQG-TSQQGPKGFKGFSGEK 12
+ G PG+ G ++G + G QGPKG +G +G K
Sbjct: 190 APGSPGLPGNCINKSNVGSVASPSFYCLPGKLGPQGPKGARGITGPK 236
Score = 40.7 bits (91), Expect = 3e-04
Identities = 25/62 (40%), Positives = 30/62 (48%)
Frame = -3
Query: 239 GEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G++GP G G GI G KG G G G PG G G +G G PG+ GD+ G
Sbjct: 219 GKLGPQGPKGAR---GI--TGPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLPGDLNNIG 273
Query: 59 TS 54
S
Sbjct: 274 CS 275
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGE 207
G G+T A + G KG G G G +G G PG G+
Sbjct: 228 GARGITGPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLPGD 268
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 55.2 bits (127), Expect = 1e-08
Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = -3
Query: 323 PG-VTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGF 147
PG + PD P A L G +G+ G G G KG+ GP G G KGE G PG G
Sbjct: 317 PGEMGPDGP-AGLAGSQGEQGPQGPVGMKGDNGPQGGAGSR-----GTKGEAGPPGPNGP 370
Query: 146 NGVPGRKGIRGDQGSDGYPGMGGDIGIQ-GTSQQGPK 39
G G G G+ G DG PG G G G Q GP+
Sbjct: 371 KGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQPGPQ 407
Score = 53.6 bits (123), Expect = 4e-08
Identities = 35/89 (39%), Positives = 43/89 (48%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KG GL G G +G GP GETG + G +G PG G G G +G RG G
Sbjct: 4 GIKGASGLQGGPGLQGITGPQGETG--------SDGAQGAPGEGGLQGPIGLQGQRGPPG 55
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G+ G+ G G + GP G G +G
Sbjct: 56 PKGSRGIAGEAGPDGPA--GPAGLDGKNG 82
Score = 52.4 bits (120), Expect = 9e-08
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG---DIGIQG-TSQQGPKGFKGFSGE 15
KG G G PG G+ G +G G G+ G PG GG IG+QG GPKG +G +GE
Sbjct: 6 KGASGLQGGPGLQGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGE 65
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG 192
L GQ+G G G G GE GP G G + +DG
Sbjct: 47 LQGQRGPPGPKGSRGIAGEAGPDGPAGPAGLDG 79
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 55.2 bits (127), Expect = 1e-08
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 293 FLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
FL G +G G G +G G G G G G + G PG PG G+PG +G +G
Sbjct: 42 FLRGTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKG 101
Query: 113 DQGSDGYPGMGGDIGIQG-TSQQGPKGFKG 27
G G PG+ G G +G GP G G
Sbjct: 102 PPGYQGMPGIAGAPGPRGPPGPMGPPGPHG 131
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/86 (41%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGY--PGYPGFNGVPGRKGIRGDQGSDG 96
G G G +G GPPG G S + G A G +G PG PG G G G RG +G G
Sbjct: 45 GTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPG 104
Query: 95 YPGMGGDIGIQGTSQQGPKGFKGFSG 18
Y GM G G G +GP G G G
Sbjct: 105 YQGMPGIAGAPG--PRGPPGPMGPPG 128
Score = 45.2 bits (102), Expect = 1e-05
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEI--GPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRG 114
G G G G G +G GPPG G + G KG GY G PG G PG +G G
Sbjct: 63 GLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGIAGAPGPRGPPG 122
Query: 113 DQGSDGYPGMGGDIGIQGTSQQGP 42
G G G + +S P
Sbjct: 123 PMGPPGPHGCASCVDYTRSSNTIP 146
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -3
Query: 194 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ---QGPKGFKGF 24
G + +G +G PG G G PG +G+ G GYPG G G GP+G G+
Sbjct: 40 GFFLRGTEGPPGPQGTKGPPGSQGL---SGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGY 96
Query: 23 SGEK 12
G K
Sbjct: 97 RGPK 100
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -3
Query: 251 EGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
+GD G GPPG G GI KG +G G PG +G+PGR GI+G++G G G G
Sbjct: 44 KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSG 102
Score = 50.0 bits (114), Expect = 5e-07
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Frame = -3
Query: 197 DGIYAKGEKGYPGYPGF------NGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
D + KG+ G PG PG G+ GRKG RG QG G G+ G IGI+G ++G G
Sbjct: 39 DRLILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKG--EKGKTG 96
Query: 35 FKGFSGEK 12
KG SG K
Sbjct: 97 RKGDSGMK 104
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG+ + G+KG+ G+ +G G G PG G KGEKG G
Sbjct: 50 PGPPGIMGRRGPRGIQGRKGNRGV---QGIPGSHGIPGRIG--------IKGEKGKTGRK 98
Query: 152 GFNGVPGRKGIR 117
G +G+ G +R
Sbjct: 99 GDSGMKGDDDMR 110
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 54.4 bits (125), Expect = 2e-08
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 6
+G G PG+PG G GR+G RG +G+ G PG G G G G KG KG GEK E
Sbjct: 131 RGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGE 190
Query: 5 K 3
+
Sbjct: 191 R 191
Score = 50.0 bits (114), Expect = 5e-07
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
G +G PG PG G G +G RG +G G PG G G G ++G G KG G+K EK
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEK 188
Score = 46.4 bits (105), Expect = 6e-06
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -3
Query: 263 LTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 84
LT G +G G PG G+ KG +G G G G PG G +G G DG G
Sbjct: 124 LTCPPGPRGPPGRPGHPGQ--------KGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGA 175
Query: 83 GGDIGIQGTSQQGPKGFKGFS--GEK 12
G G++G Q+G KG +G GEK
Sbjct: 176 VGSKGMKG--QKGEKGERGIGVRGEK 199
Score = 45.2 bits (102), Expect = 1e-05
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 108
GQKG G G+ G +G G PG G DG A G KG G G G G G+RG++
Sbjct: 141 GQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGERG-IGVRGEK 199
Query: 107 GSDG 96
G+ G
Sbjct: 200 GAPG 203
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 54.4 bits (125), Expect = 2e-08
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----------GEKGYPGYPGFNGVP 135
G G G+ G G G GPPG G + I G+ K G +G+PG PG NG
Sbjct: 125 GTHGKNGIPGHPGPPGPSGPPGRNGLNGIPGVSGKQGPPGPPGKRGRRGHPGEPGRNGTH 184
Query: 134 GRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSG 18
G G RG G G G G G G Q G G G G
Sbjct: 185 GSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPGERG 224
Score = 44.0 bits (99), Expect = 3e-05
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK----GEKGYPGYPGFNGVPGRKGIR 117
G++G G G+ G +G G PG G G K G G G PG GVPG+ G
Sbjct: 158 GKQGPPGPPGKRGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKA 217
Query: 116 GDQGSDGYPG 87
G G G PG
Sbjct: 218 GSPGERGPPG 227
Score = 43.2 bits (97), Expect = 5e-05
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -3
Query: 197 DGIYAKGE-----KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 33
DGIY+ G PG G NG+PG G G G G G+ G G+ G +QGP G
Sbjct: 108 DGIYSTESLRIQTSGIPGTHGKNGIPGHPGPPGPSGPPGRNGLNGIPGVSG--KQGPPGP 165
Query: 32 KGFSGEK 12
G G +
Sbjct: 166 PGKRGRR 172
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 54.4 bits (125), Expect = 2e-08
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G+ G+ G +G+ G+ GE G GE+GES GE G G G +G G G G+ G
Sbjct: 662 GESGESGESGKSGESGESGESGESGES--------GESGESGESGESGESGESGESGESG 713
Query: 104 SDGYPGMGGDIGIQGTSQ 51
G G G+ G G SQ
Sbjct: 714 ESGESGESGESGDSGESQ 731
Score = 54.0 bits (124), Expect = 3e-08
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G+ G+ G +GE G+ GE G GE+GES GE G G G +G G G G+ G
Sbjct: 665 GESGESGKSGESGESGESGESGESGES--------GESGESGESGESGESGESGESGESG 716
Query: 104 SDGYPGMGGDIG-IQGTSQQGPKGFKGFSGEKEEK 3
G G GD G Q + + G EK K
Sbjct: 717 ESGESGESGDSGESQDNADSSIQKRNGIPQEKVSK 751
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP-GYPGFNGVPGRKGIRGDQ 108
G+ G+ G +GE G+ GE G GE+GES G A GE+ GY + R I ++
Sbjct: 909 GESGESGESGESGESGESGESGESGESGESGDSAAGEESQDNGYASVGSITKRSWIPSEE 968
Score = 39.9 bits (89), Expect = 5e-04
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
K D +GE G+ G+ G GE+GES G GE G G G +G G + +
Sbjct: 893 KEDSNESGESGESGKSGESGESGESGESG--ESGESGESGESGESGESGDSAAGEESQDN 950
Query: 98 GYPGMG 81
GY +G
Sbjct: 951 GYASVG 956
Score = 33.1 bits (72), Expect = 0.058
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLI 198
G+ G+ G +GE + GE+G G++GES I
Sbjct: 772 GESGESGESGESDETGELGESGKSGESSI 800
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGES 204
G+ G+ G +GE G+ E G GE+G+S
Sbjct: 769 GESGESGESGESGESDETGELGESGKS 795
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGES 204
+ G+ G +GE G+ GE GE GES
Sbjct: 767 EPGESGESGESGESGESDETGELGES 792
Score = 25.8 bits (54), Expect = 8.8
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 13/106 (12%)
Frame = -3
Query: 284 GQKGDM---GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
G++ DM G E GD + G GE+GE D GE + IR
Sbjct: 575 GKEDDMDGSGSASESGDSDDSGNSGESGEGEPD--EGDGEDQTASNTSLDDEKSNTIIRE 632
Query: 113 DQGSDGYPG----------MGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G G + + I G+ + G G G SGE E
Sbjct: 633 QSGGSDESGERSASRESGKLKAESDIDGSGESGESGESGKSGESGE 678
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 54.4 bits (125), Expect = 2e-08
Identities = 32/74 (43%), Positives = 40/74 (54%)
Frame = -3
Query: 233 IGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 54
IGPPG G +D KG PG G G+PG++G G QG G G G G+ GT
Sbjct: 492 IGPPGPPGLCNVDVC-----KGTPGIQGPQGLPGKQGPAGPQGRQGASGPPGIPGLNGTV 546
Query: 53 QQGPKGFKGFSGEK 12
GP+G +GFSG +
Sbjct: 547 --GPRGPQGFSGPR 558
Score = 54.0 bits (124), Expect = 3e-08
Identities = 33/88 (37%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
KG G+ G +G G+ GP G G +G G PG PG NG G +G +G G
Sbjct: 507 KGTPGIQGPQGLPGKQGPAGPQGR--------QGASGPPGIPGLNGTVGPRGPQGFSGPR 558
Query: 98 GYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G G G G+QG QGP G G
Sbjct: 559 GLQGTPGQNGLQGPPGPQGPMGVNNSIG 586
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/78 (41%), Positives = 38/78 (48%)
Frame = -3
Query: 248 GDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
G G GPPG GE KG +G G G G PG+ G G G G PG GD G
Sbjct: 23 GPPGPAGPPGSKGE--------KGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKG 74
Query: 68 IQGTSQQGPKGFKGFSGE 15
+G + GP+G KG G+
Sbjct: 75 EKGDA--GPRGLKGDPGK 90
Score = 46.4 bits (105), Expect = 6e-06
Identities = 27/66 (40%), Positives = 32/66 (48%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KG+ G G G +G GPPG+ G A G+ G G PG G G KG G +G
Sbjct: 32 GSKGEKGNRGRRGRRGPRGPPGKPG--------ADGKPGIRGPPGPKGDKGEKGDAGPRG 83
Query: 104 SDGYPG 87
G PG
Sbjct: 84 LKGDPG 89
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 122 IRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
+RG G G PG G+ G +G ++GP+G G G
Sbjct: 21 VRGPPGPAGPPGSKGEKGNRGRRGRRGPRGPPGKPG 56
>SB_1366| Best HMM Match : Collagen (HMM E-Value=6.2e-05)
Length = 442
Score = 51.2 bits (117), Expect = 2e-07
Identities = 33/80 (41%), Positives = 40/80 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KG G G G+KG +G G G I G KG G G G G+ G KGI G++G
Sbjct: 39 GNKGIGGNKGIGGNKGIVGNKGIGGNKGIGG--NKGIGGNKGIVGNKGIVGNKGIGGNKG 96
Query: 104 SDGYPGMGGDIGIQGTSQQG 45
G G+GG+ GI G G
Sbjct: 97 IVGNKGIGGNKGIGGNKGIG 116
Score = 46.4 bits (105), Expect = 6e-06
Identities = 32/78 (41%), Positives = 39/78 (50%)
Frame = -3
Query: 245 DKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 66
+KG G G G I G KG G G G G+ G KGI G++G G G+GG+ GI
Sbjct: 22 NKGIGGNKGIGGNKGIGG--NKGIGGNKGIGGNKGIVGNKGIGGNKGIGGNKGIGGNKGI 79
Query: 65 QGTSQQGPKGFKGFSGEK 12
G +G G KG G K
Sbjct: 80 VG--NKGIVGNKGIGGNK 95
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 50.8 bits (116), Expect = 3e-07
Identities = 33/82 (40%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KGD G TG G G GP G+TG + G KG G G G G G +GD G
Sbjct: 19 GPKGDTGATGPTGPTGPTGPKGDTGAT-----GPTGPKGDTGATGPAGPTGPTGPKGDTG 73
Query: 104 SDGYPGMGGDIGIQG-TSQQGP 42
+ G G G G +G T GP
Sbjct: 74 ATGPAGPTGPTGPKGDTGATGP 95
Score = 48.4 bits (110), Expect = 1e-06
Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G TG +GD G GP G TG + G KG G G G G G G G
Sbjct: 10 GATGPTDPTGPKGDTGATGPTGPTGPT--------GPKGDTGATGPTGPKGDTGATGPAG 61
Query: 104 SDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 18
G G GD G G T GPKG G +G
Sbjct: 62 PTGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 94
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 50.8 bits (116), Expect = 3e-07
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G KGD G G+ G +G GPPG+ G A G++G G PG G G KG G +G
Sbjct: 143 GPKGDKGRPGKRGRRGPAGPPGQPG--------ADGKQGIRGPPGIKGERGPKGDVGPRG 194
Query: 104 SDGYPG 87
G PG
Sbjct: 195 LKGEPG 200
Score = 49.6 bits (113), Expect = 6e-07
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -3
Query: 251 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
+G G GPPG G+ G +G +G G PG G G++GIRG G G G GD+
Sbjct: 133 QGPPGNQGPPGPKGDKGRPG--KRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDV 190
Query: 71 GIQG 60
G +G
Sbjct: 191 GPRG 194
Score = 48.0 bits (109), Expect = 2e-06
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSGEK 12
G +G PG G G PG++G RG G G PG G GI+G ++GPKG G G K
Sbjct: 137 GNQGPPGPKGDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVGPRGLK 196
Query: 11 EE 6
E
Sbjct: 197 GE 198
Score = 45.6 bits (103), Expect = 1e-05
Identities = 28/85 (32%), Positives = 39/85 (45%)
Frame = -3
Query: 293 FLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
++ G G+ G G +GDKG G G G + G G PG G G+ G GI+G
Sbjct: 131 YVQGPPGNQGPPGPKGDKGRPGKRGRRGPA--------GPPGQPGADGKQGIRGPPGIKG 182
Query: 113 DQGSDGYPGMGGDIGIQGTSQQGPK 39
++G G G G G G + P+
Sbjct: 183 ERGPKGDVGPRGLKGEPGRIRNAPR 207
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.0 bits (114), Expect = 5e-07
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = -3
Query: 254 EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
++G+ G GP G G+ G G PG+PG N +PG G+ G G G PG G
Sbjct: 113 QQGEAGVQGPTGPAGDP--------GMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGR 164
Query: 74 IGIQGTSQQGPK 39
G++G +G +
Sbjct: 165 PGLKGEEFRGAR 176
Score = 41.5 bits (93), Expect = 2e-04
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG-YP 153
G P P+ + F Q GD G EG+KGE+G AKGEKG G P
Sbjct: 4 GGPNGFLGLPVFYTFPQ-GDPGPAAMEGNKGELG--------------AKGEKGLQGNTP 48
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 63
G PGR RG G G PG G+ G+Q
Sbjct: 49 DQPGPPGR---RGSAGMKGEPGPAGEKGMQ 75
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/54 (42%), Positives = 24/54 (44%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 123
G GD G+TG G G PGE G G G PG PG G PG KG
Sbjct: 124 GPAGDPGMTGVPGFPGINAIPGEGG--------LPGGNGLPGNPGDPGRPGLKG 169
Score = 33.1 bits (72), Expect = 0.058
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -3
Query: 218 ETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD---QGSDGYPGMGGDIGIQGTSQQ 48
+ GE+ + G G G PG G G PG I G+ G +G PG GD G G +
Sbjct: 113 QQGEAGVQG--PTGPAGDPGMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGLKGE 170
Query: 47 GPKG 36
+G
Sbjct: 171 EFRG 174
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 49.6 bits (113), Expect = 6e-07
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGI---RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
KG +G+PG G +G+PG KG GDQG G PG GD G +G ++G G G G
Sbjct: 15 KGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKG--REGEDGANGPPG 70
Score = 46.0 bits (104), Expect = 8e-06
Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP---GFNGVPGRKGIRGDQGSDGYPG 87
G G KG G PG G +DGI G KG+PG P G GVPG++G G +G +G G
Sbjct: 10 GIMGLKGNQGFPGPMG---LDGI--PGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDG 64
Query: 86 MGGDIGIQGTSQQGPK 39
G G G++ K
Sbjct: 65 ANGPPGSPGSANMNWK 80
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKG 123
G G MGL G G KG G PG+ G + G G KG G G NG PG G
Sbjct: 19 GFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPG 73
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES 204
G+PG D + G++GD G G EG+ G GPPG G +
Sbjct: 34 GFPGTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPGSA 75
Score = 35.9 bits (79), Expect = 0.008
Identities = 29/74 (39%), Positives = 35/74 (47%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G+PG PM L G G G G GD+G G PG+ G+ DG AKG +G G G
Sbjct: 19 GFPG-----PMG-LDGIPGLKGFPGTPGDQGRQGVPGKRGD---DG--AKGREGEDGANG 67
Query: 149 FNGVPGRKGIRGDQ 108
G PG + Q
Sbjct: 68 PPGSPGSANMNWKQ 81
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 48.8 bits (111), Expect = 1e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = -3
Query: 269 MGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 90
M + G +GD+G GP G G +G KG+ Y G G+KG RG++G G P
Sbjct: 208 MCIQGPKGDRGRRGPRGRQGPQ-----GKRGPKGHTVYRRTQGAVGQKGDRGERGPQGPP 262
Query: 89 GMGGDIGIQGTSQQGP 42
G G IG +G + GP
Sbjct: 263 GPKGPIGPKG--EPGP 276
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 48.8 bits (111), Expect = 1e-06
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
G+ G PG PG +G PG G G+ G +G PG G G G +GPKG +G G
Sbjct: 35 GKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 43.2 bits (97), Expect = 5e-05
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = -3
Query: 185 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
A+G G G PG GV G+ G G G+DG G G G +G GPKG +G G
Sbjct: 30 AQGHDGKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKG--PPGPKGSRGPKG 83
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 54
G G+ G I G++ K G G G G NG PG G +G G G G G G GT+
Sbjct: 32 GHDGKNGIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
Score = 32.3 bits (70), Expect = 0.10
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 332 PGWPGV--TPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 159
PG PGV P P G+ G+ G G+ G G GPPG G ++G KG G
Sbjct: 40 PGIPGVHGKPGTP-----GKSGNDGRNGKPGAPGPKGPPGPKG--------SRGPKGVQG 86
Query: 158 YPG 150
PG
Sbjct: 87 PPG 89
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 48.4 bits (110), Expect = 1e-06
Identities = 31/88 (35%), Positives = 39/88 (44%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
L G +G GL G+ G G G PG G +G G G PG G+PG +G G
Sbjct: 248 LKGLQGPPGLNGQAGTSGAPGFPGAPG--------FQGPPGLDGMPGAPGMPGPQGYPGG 299
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
G+ G PG G G G + P + G
Sbjct: 300 SGAPGIPGSPGMPGPPGPAGPTPIRYNG 327
Score = 42.3 bits (95), Expect = 9e-05
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = -3
Query: 194 GIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G KG +G PG G G G G G G G PG+ G G G GP+G+ G SG
Sbjct: 245 GFILKGLQGPPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPG--MPGPQGYPGGSG 301
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/54 (44%), Positives = 26/54 (48%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G+ G G PGF G PG +G G G G PGM G G G S G G G G
Sbjct: 259 GQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGS--GAPGIPGSPG 310
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG 192
PG+PG L G G G+ G +G G G PG G + G
Sbjct: 267 PGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPG 313
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 48.0 bits (109), Expect = 2e-06
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGY-----PGFNGVPGRKGI 120
G KGD G G +GDKG+ +L D +A G + G G PG++G
Sbjct: 77 GLKGDPGPVGPKGDKGDTVSARTISATLRDN-FALGTVRDNFFILKVTQGSQGPPGKRGP 135
Query: 119 RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 9
G++G G PG+ GD+ GPKG KG SG E
Sbjct: 136 PGEKGDQGIPGVKGDV--------GPKGEKGDSGGPE 164
>SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04)
Length = 60
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 123
G+ G+ G G G G G+ GE ++GI GEKG PG G G+ G KG
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDRGIQGPKG 51
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
GE+G G PG NG G G +G++G +G + G+ G GPKG +G G K
Sbjct: 1 GERGIDGRPGQNGTAGFSGQKGEKGLEGIT-ITGEKG-----NPGPKGDRGIQGPK 50
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 46.8 bits (106), Expect = 4e-06
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = -3
Query: 185 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
A+G G G PG GVPG+ G G G+DG G G G +G GPKG +G G
Sbjct: 30 AQGHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKG--PPGPKGSRGPKG 83
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 54
G G+ G I G+ K G G G G NG PG G +G G G G G G GT+
Sbjct: 32 GHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPGTT 91
Score = 33.1 bits (72), Expect = 0.058
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PGV P P G+ G+ G G+ G G GPPG G ++G KG G P
Sbjct: 40 PGIPGV-PGKPGTP--GKSGNDGRNGKPGAPGPKGPPGPKG--------SRGPKGVQGPP 88
Query: 152 G 150
G
Sbjct: 89 G 89
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 121 IPFLPGTPLKPGYPG 165
IP +PG P KPG PG
Sbjct: 39 IPGIPGVPGKPGTPG 53
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 46.4 bits (105), Expect = 6e-06
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = -3
Query: 299 MAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI 120
+A + +G G G G +G +GP G G+ G+ KG+KG G G G PG KG
Sbjct: 673 VAAIAKMEGPQGPRGFNGSEGPVGPKGLKGDP---GL--KGDKGDTGANGTAGAPGVKGD 727
Query: 119 RGDQGSDGYPG 87
+GD G+ G G
Sbjct: 728 KGDTGASGAKG 738
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT-SQQGPKGFKGFSGEKEE 6
+G +G G+ G G G KG++GD G G G G G G +G KG G SG K E
Sbjct: 680 EGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 739
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGES 204
G G G G +GDKG+ G G GE+
Sbjct: 714 GANGTAGAPGVKGDKGDTGASGAKGEA 740
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGE 216
G PG+ D G G G+ G++GD G G GE
Sbjct: 702 GDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGE 739
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 46.4 bits (105), Expect = 6e-06
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY-AKGEKGYPGYPGFNGVPGRKGIRGDQ 108
G G G G +G KG+ G G G +G +KG++G G G GVPG +G +G Q
Sbjct: 294 GPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQ 353
Query: 107 G 105
G
Sbjct: 354 G 354
Score = 39.9 bits (89), Expect = 5e-04
Identities = 28/72 (38%), Positives = 36/72 (50%)
Frame = -3
Query: 242 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 63
+G IGP G G KG++G G G G +G +GDQ G G+ GD G+
Sbjct: 293 EGPIGPRGYNGSQ-----GPKGDQGVQGPIGPQRYNGTQGSKGDQ---GVQGVKGDQGVP 344
Query: 62 GTSQQGPKGFKG 27
G QGPKG +G
Sbjct: 345 G--PQGPKGAQG 354
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQ----GPKGFKGFSG 18
G +GY G G G G +G G Q +G G GD G+QG GP+G KG G
Sbjct: 297 GPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQG 354
Score = 32.7 bits (71), Expect = 0.076
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA 183
G KGD G+ G +GD+G GP G G + + A
Sbjct: 327 GSKGDQGVQGVKGDQGVPGPQGPKGAQGVGNLSA 360
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGI 189
G +G G G +G KG+ G PG G G+
Sbjct: 324 GTQGSKGDQGVQGVKGDQGVPGPQGPKGAQGV 355
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 21
+GE+G G PG G G KG +G+QG G G G IG G +GPKG G S
Sbjct: 469 QGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALG--PRGPKGESGIS 520
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEEK 3
PG G G +G++GD G G G GD G QG QGP+G G G + K
Sbjct: 463 PGPRGPQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPK 514
Score = 39.1 bits (87), Expect = 9e-04
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 140 VPGRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSG 18
+PG +G +G+QG G PG G G +G +QGPKG +G G
Sbjct: 462 IPGPRGPQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQG 503
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G G GE+G KG+ GP G+ G +GE+G G G G G G RG +G G
Sbjct: 464 GPRGPQGEQGLKGDPGPQGQQGPK-----GDQGEQGPKGSQGPQGPIGALGPRGPKGESG 518
Query: 95 YPGMGG 78
+ G
Sbjct: 519 ISALRG 524
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETG-ESLIDGIYAKGEKGYPGYPGFNG 141
L G G G G +GD+GE GP G G + I + +G KG G G
Sbjct: 474 LKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGESGISALRG 524
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 117
G PG+ G+ DG G +G PGY G +G G+ GI+
Sbjct: 354 GAPGKDGKDGKDGESIVGPQGPPGYNGSDGKDGKDGIQ 391
Score = 34.3 bits (75), Expect = 0.025
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG-IYAKGEKGYPGYPGFNGVPG 132
G KGD G G++G KG+ G G G G I A G +G G G + + G
Sbjct: 473 GLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGESGISALRG 524
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 162
G KG G G G G GP GE+G S + G + K P
Sbjct: 494 GPKGSQGPQGPIGALGPRGPKGESGISALRGCLHRLVKSKP 534
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 101 DGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
DG PG G G G S GP+G G++G
Sbjct: 353 DGAPGKDGKDGKDGESIVGPQGPPGYNG 380
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = -3
Query: 185 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
A+G G G PG GVPG+ G G G+DG G G G +G GPKG +G G
Sbjct: 30 AQGHDGKNGIPGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKG--PPGPKGSRGPKG 83
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = -3
Query: 251 EGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
+G G+ G PG+ G + G G G G G NG PG G +G G G G G
Sbjct: 31 QGHDGKNGIPGDPG---VPG--QLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQ 85
Query: 71 GIQGTS 54
G GT+
Sbjct: 86 GPPGTT 91
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG 192
PG PGV G G G G G KG GP G G + G
Sbjct: 40 PGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQG 86
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/60 (41%), Positives = 28/60 (46%)
Frame = -3
Query: 239 GEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G GPPG L +G KG G G G+ G KG +GDQG G PG G G G
Sbjct: 360 GPPGPPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESG 419
Score = 39.1 bits (87), Expect = 9e-04
Identities = 23/63 (36%), Positives = 29/63 (46%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ 51
GPPG G + D + +G G G NG G +G +G QG G G G G +G S
Sbjct: 360 GPPGPPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESG 419
Query: 50 QGP 42
P
Sbjct: 420 GPP 422
Score = 37.9 bits (84), Expect = 0.002
Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -3
Query: 332 PGWPG-VTPDXPMAF-LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 159
PG PG PD + + G KG G G G +GE GP G+ G KGE G PG
Sbjct: 362 PGPPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQGDQG--------PKGEPGTPG 413
Query: 158 YPGFNGVP 135
G +G P
Sbjct: 414 AKGESGGP 421
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGS 102
++G G G +G G GP G AKG++G G G G+ G +G +G QG
Sbjct: 115 RRGKRGEPGPQGPPGPQGPTG-----------AKGDQGPEGIQGPQGIRGPEGPQGPQGP 163
Query: 101 DGYPGMGG 78
G G G
Sbjct: 164 QGLEGKAG 171
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
R+G RG+ G G PG G G +G QGP+G +G G
Sbjct: 115 RRGKRGEPGPQGPPGPQGPTGAKG--DQGPEGIQGPQG 150
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGY 156
G G GL GE+G +G+ GP GE G AKGE G P +
Sbjct: 386 GPNGTRGLQGEKGPQGDQGPKGEPGTP-----GAKGESGGPPF 423
Score = 30.7 bits (66), Expect = 0.31
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI 120
G +G G G G KG+ GP G G GI +G +G G G G+ G+ G+
Sbjct: 123 GPQGPPGPQGPTGAKGDQGPEGIQGP---QGI--RGPEGPQGPQGPQGLEGKAGV 172
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = -3
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
+G PG PG G G G+RG++G G PG+GG + I S G G + KEE+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGVGGSV-IAQKSDTGDDGKEPIVYPKEER 176
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPG 219
G KGD G+ GE+GD+G G G
Sbjct: 131 GPKGDPGVRGEKGDRGIPGVGG 152
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 242 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI----RGDQGSDG 96
+G GPPG G KG+ G G G G+PG G + D G DG
Sbjct: 121 RGPPGPPGPQGP--------KGDPGVRGEKGDRGIPGVGGSVIAQKSDTGDDG 165
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G +G G+ G+ G G GPPG +G Y G G PG G+PG G G +G
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGR------YVPGPPGPPGRTVI-GLPGPPGPAGPRG 517
Query: 104 SDGYPG 87
G PG
Sbjct: 518 IPGLPG 523
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 143 GVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
G G +G+RGD+G G G G G GP G
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGRYVPGPPGPPG 500
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 43.6 bits (98), Expect = 4e-05
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = -3
Query: 248 GDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
G G GPPG G+ I +G +GY G PG G G G +GD+G G G GD
Sbjct: 1 GYPGIEGPPGPKGDR--GPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAGD 56
Score = 43.2 bits (97), Expect = 5e-05
Identities = 26/66 (39%), Positives = 31/66 (46%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G +GD+G IGP G +G +G PG G G PG KG G +G
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRG-----------PQGYQGAPGPKGTGGFPGEKGDEGPRG 49
Query: 104 SDGYPG 87
DG G
Sbjct: 50 EDGSAG 55
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
G G+ G G KG+ GP G G G A G KG G+PG G G +G G G D
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQG--APGPKGTGGFPGEKGDEGPRGEDGSAGDD 57
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFSGE 15
GYPG G PG KG RG G G G G G +GT G KG +G GE
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGE 50
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRK---GIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGE 15
GYPG G G G + G RG QG G PG G G G +GP+G G +G+
Sbjct: 1 GYPGIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAGD 56
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESL 201
G KG G GE+GD+G G G G+ L
Sbjct: 31 GPKGTGGFPGEKGDEGPRGEDGSAGDDL 58
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 43.2 bits (97), Expect = 5e-05
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETG---ESLIDGIYAK-GEKGYPGYPGFNGVP---GRKG 123
Q GD G+ + GD G G+TG ++ GI + G+ G P PG G+P G G
Sbjct: 387 QAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQPGDTGIPTQPGDTG 446
Query: 122 IRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
I G G P GD GI +Q G G +G+
Sbjct: 447 IPTQAGDTGIPTQAGDTGI--PTQAGYTGIPTRAGD 480
Score = 42.3 bits (95), Expect = 9e-05
Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP---GRKGIRGD 111
Q GD G+ + GD G PG+TG G+ G P G G+P G GI
Sbjct: 414 QAGDTGIPTQAGDTGIPTQPGDTGIPT-----QPGDTGIPTQAGDTGIPTQAGDTGIPTQ 468
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G G P GD GI +Q G G +G+ E
Sbjct: 469 AGYTGIPTRAGDTGI--PTQAGDTGIPTQAGDIRE 501
Score = 39.5 bits (88), Expect = 7e-04
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP---GRKGIRGD 111
Q GD G+ + GD G G+TG G+ G P G G+P G GI
Sbjct: 342 QAGDTGIPTQAGDTGIPTQAGDTGIPT-----QAGDTGIPTQAGDTGIPTQAGDTGIPTQ 396
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
G G P GD GI +Q G G +G+
Sbjct: 397 AGDTGIPTQAGDTGI--PTQAGDTGIPTQAGD 426
Score = 34.3 bits (75), Expect = 0.025
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -3
Query: 239 GEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP---GRKGIRGDQGSDGYPGMGGDIG 69
G+ G P + G++ I G+ G P G G+P G GI G G P GD G
Sbjct: 335 GDTGIPTQAGDTGIPT--QAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTG 392
Query: 68 IQGTSQQGPKGFKGFSGE 15
I +Q G G +G+
Sbjct: 393 I--PTQAGDTGIPTQAGD 408
>SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31)
Length = 212
Score = 42.7 bits (96), Expect = 7e-05
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYA-KGE---KGYPGYPGFNGVPGRKGI 120
KG+ + GEE KGE GE GE I G A KGE KG G + G + I
Sbjct: 82 KGEEAIKGEEAIKGEESIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKGVETIKGEEAI 141
Query: 119 RGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFSGEKEEK 3
+G++ G + G+ I+G +G + KG K EK
Sbjct: 142 KGEEAIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKREK 181
Score = 40.3 bits (90), Expect = 4e-04
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGE---TGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
KG+ + GEE KGE GE GE I G+ + KG G + G + I+G++
Sbjct: 16 KGEEAIKGEEAIKGEETIKGEEAIKGEEAIKGV--ETIKGEEAIKGEETIKGEEAIKGEE 73
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G + G+ I+G ++ KG + GE+ K
Sbjct: 74 AIKGVEAIKGEEAIKG--EEAIKGEESIKGEETIK 106
Score = 39.5 bits (88), Expect = 7e-04
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGE---KGYPGYPGFNGVPGRKGIRGD 111
KG+ + GEE KGE GE I G+ A KGE KG G + G + I+G+
Sbjct: 52 KGEEAIKGEETIKGE---EAIKGEEAIKGVEAIKGEEAIKGEEAIKGEESIKGEETIKGE 108
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
+ G + G+ I+G ++ KG + GE+ K
Sbjct: 109 EAIKGEEAIKGEETIKG--EEAIKGVETIKGEEAIK 142
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 42.7 bits (96), Expect = 7e-05
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG 123
+G G G G KG GPPGE G + G G G+PG +G PG KG
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYGYNGFPG----SRHGQSGFPGLHGPPGPKG 127
Score = 39.9 bits (89), Expect = 5e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPG-MGGDIGIQGTSQQGPKGFKG 27
+G PGYPG G G G G+ G +G+PG G G G GP G KG
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYGYNGFPGSRHGQSGFPGL--HGPPGPKG 127
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
GPPG G+ I + +G PG PG G G++G+ GD G G PG G G
Sbjct: 8 GPPGIRGDPGIPSVV----RGPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPG 57
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETG 210
PG P V P G+ G G G+EG G+ G PG+ G
Sbjct: 16 PGIPSVVRGPP-----GKPGLPGNKGKEGLPGDDGVPGQPG 51
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = -3
Query: 221 GETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
G+ G+ DGI G G PG PG +G PG++G+ G G G PG+ G
Sbjct: 11 GKDGKDGKDGI--DGRDGRPGPPGRHGFPGQRGMPGGTGPPGPPGIIG 56
Score = 33.9 bits (74), Expect = 0.033
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 117
G+ G G G +G G GPPG G G++G PG G G PG GIR
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHG--------FPGQRGMPGGTGPPGPPGIIGIR 58
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 39.9 bits (89), Expect = 5e-04
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = -3
Query: 296 AFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIR 117
A L G + M +G +G G + G G +G PG G G GR G R
Sbjct: 62 AALGGAQPQMNTSGLQGRLGSLNKGSVQGRLGARG-RGRGMARGPGR-GMVGARGRAGFR 119
Query: 116 GDQGSDGYPGMGGDIGIQ-----GTSQQGPKGFKGFSG 18
G++G PG GG G + G ++ GP+G F G
Sbjct: 120 GNRGGFTSPGRGGAAGFRGRGRGGMTRGGPRGRASFGG 157
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 39.5 bits (88), Expect = 7e-04
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKGFKGFSGE 15
G +GY G G G G +G +G G+ G G G G GT+ QQGP+G G G+
Sbjct: 206 GPRGYNGSRGPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKGD 261
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -3
Query: 302 PMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
P F+ G +G G G++G +G GP G+TG + G +G +G PG G
Sbjct: 234 PQGFM-GPRGHNGTAGQQGPQGPPGPKGDTGPAGPGG--PRGNQGPPGPSG 281
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 39.5 bits (88), Expect = 7e-04
Identities = 30/102 (29%), Positives = 36/102 (35%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG G P G G G +G PPG+ G G G PG
Sbjct: 245 PGQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQGYGPP--PGQQ 302
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
G+ PG++G G GY G G G Q +GF G
Sbjct: 303 GYGSPPGQQGYGPPPGQQGYGPPAGQQG-YGPPQGQQQGFSG 343
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 39.1 bits (87), Expect = 9e-04
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G++GD+G++GPPG G + G +G++G PG PG
Sbjct: 256 GQKGDRGDMGPPGHPGPPGVRG--RRGKRGPPGPPG 289
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
+G+ G PG+PG GV GR+G RG G G P G
Sbjct: 261 RGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGG 294
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -3
Query: 200 IDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
+DG KG++G G PG G PG +G RG +G G PG
Sbjct: 254 VDG--QKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPG 289
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = -3
Query: 206 SLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
SL+ + G+KG G G G PG G+RG +G G PG G G + P
Sbjct: 247 SLLRQKWVDGQKGDRGDMGPPGHPGPPGVRGRRGKRGPPGPPGP--PNGGATPHPGAMPT 304
Query: 26 FSGEKEEK 3
SGE +K
Sbjct: 305 PSGEPPDK 312
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
+G G PG +G+PG+ G+ G G+ G PG
Sbjct: 124 QGPQGLPGRDGLPGKAGLPGRDGAMGPPG 152
Score = 29.1 bits (62), Expect = 0.94
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
+G G G PG G+PGR G G G D
Sbjct: 127 QGLPGRDGLPGKAGLPGRDGAMGPPGRD 154
Score = 29.1 bits (62), Expect = 0.94
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG-YPGFNGVPGRKG 123
G +GDMG G G G G G+ G G G +PG P +G P KG
Sbjct: 259 GDRGDMGPPGHPGPPGVRGRRGKRGPPGPPGPPNGGATPHPGAMPTPSGEPPDKG 313
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIY 186
P PG P P+ + G KG GL G G KGE GP GE G + G+Y
Sbjct: 461 PTVPG--PQPPI--IVGSKGPDGLRGYRGPKGEPGPKGEPGYKVCIGLY 505
>SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07)
Length = 198
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGI 120
L G +G GL G++GDKG+ G G G+ KG+KG G G G+ G +G+
Sbjct: 99 LQGAQGARGLKGDKGDKGDQGIQGLKGD--------KGDKGEKGDKGDQGLKGNQGV 147
Score = 36.7 bits (81), Expect = 0.005
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = -3
Query: 185 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 54
A+G KG G G G+ G KG +GD+G G G G G QG S
Sbjct: 105 ARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVS 148
Score = 33.1 bits (72), Expect = 0.058
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFN 144
G +G GL G++GDKGE G G+ G G+ A G F+
Sbjct: 116 GDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVSATATPIITGKAAFS 162
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPG 219
G G D + L G KGD G G++GD+G G G
Sbjct: 110 GDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQG 146
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 66
GP G G + G KG++G G G G G +G +GDQG G+ G G+ G+
Sbjct: 822 GPMGPRGFNGSQG--PKGDQGVQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESGV 874
Score = 35.1 bits (77), Expect = 0.014
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G G G G GP G+ G +G G GY G G G +GI+G G+ G G
Sbjct: 822 GPMGPRGFNGSQGPKGDQG--------VQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESG 873
Query: 86 MG 81
+G
Sbjct: 874 VG 875
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIG 228
G KGD G+ G G KGE G
Sbjct: 855 GPKGDQGIQGFNGTKGESG 873
>SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036)
Length = 60
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGE------TGESLIDGIYAKGEKGYPGYPGFNGVPGR 129
G +G G+TG +G +G PPG+ T + KG+KG PG PG NG GR
Sbjct: 2 GARGPPGVTGAQGPRG---PPGQVLYMNSTSGNTTAVPGPKGDKGDPGRPGLNGTDGR 56
Score = 31.5 bits (68), Expect = 0.18
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = -3
Query: 239 GEIGPPGETGESLIDGIYAKGEKGYPGYPGF-NGVPGRK----GIRGDQGSDGYPGMGGD 75
G GPPG TG A+G +G PG + N G G +GD+G G PG+ G
Sbjct: 2 GARGPPGVTG--------AQGPRGPPGQVLYMNSTSGNTTAVPGPKGDKGDPGRPGLNGT 53
Query: 74 IG 69
G
Sbjct: 54 DG 55
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGES 204
G GDMG G +GDKG+ G PGETG +
Sbjct: 192 GIPGDMGPRGAKGDKGDRGKPGETGSA 218
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 134 GRKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
G+K ++G QG G G GD G QG GP+G KG G++
Sbjct: 168 GKKCVQGPQGLRGPRGYSGDRGPQGIPGDMGPRGAKGDKGDR 209
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
+G +GY G G G+PG G RG +G G G G+ G
Sbjct: 179 RGPRGYSGDRGPQGIPGDMGPRGAKGDKGDRGKPGETG 216
Score = 32.7 bits (71), Expect = 0.076
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNG 141
G +G G G GD+G G PG+ G AKG+KG G PG G
Sbjct: 174 GPQGLRGPRGYSGDRGPQGIPGDMGPR-----GAKGDKGDRGKPGETG 216
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -3
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
G G+ G +G GD+G G P GD+G +G +G KG +G GE
Sbjct: 174 GPQGLRGPRGYSGDRGPQGIP---GDMGPRGA--KGDKGDRGKPGE 214
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 221 GETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGI 66
G TG S + G+ G GY GY G+ G+ G+ G+ G G G G G G+
Sbjct: 1773 GMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMSGM 1825
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 239 GEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
G G G TG S + G+ G GY G G G+ G+ G+ G G G GMG
Sbjct: 1773 GMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSGKTGMSGVTGDSGMSGMG 1826
Score = 29.5 bits (63), Expect = 0.71
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
P P + M + G G G+TG G G G G TG++ + G G G G
Sbjct: 1763 PPSPPFSMKSGMTGMSGMTGMSGMTGLTGYTGYTGYTGMTGKTGMSG--KTGMSGVTGDS 1820
Query: 152 GFNGVPGRK 126
G +G+ GR+
Sbjct: 1821 GMSGM-GRR 1828
>SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003)
Length = 157
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G +G G PG+ GVPG +G++G++G G G
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQGEEGPAGNKG 31
Score = 33.1 bits (72), Expect = 0.058
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 125 GIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
G +G QG+ GY G+ G G+QG ++GP G KG
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQG--EEGPAGNKG 31
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQG 105
+G GY G PG G+ G +G G++G
Sbjct: 6 QGNPGYQGVPGPRGMQGEEGPAGNKG 31
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLID 195
G G G+ G G +GE GP G G ++
Sbjct: 7 GNPGYQGVPGPRGMQGEEGPAGNKGPQWVN 36
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTS-QQGPKG 36
PG G PG +G+ G QG PG GDIG G+S QGP G
Sbjct: 176 PGPQGPPGPQGLPGPQG---VPGPAGDIGPSGSSGPQGPPG 213
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
+G G G PG GVPG G G GS G G G
Sbjct: 179 QGPPGPQGLPGPQGVPGPAGDIGPSGSSGPQGPPG 213
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 84
KG+KG G G G G KG +GDQG+ G G+
Sbjct: 257 KGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKGL 289
Score = 35.1 bits (77), Expect = 0.014
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEK 12
++G+RG +G G G GD GIQG +G KG +G G K
Sbjct: 247 KQGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAK 287
Score = 34.7 bits (76), Expect = 0.019
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
KG+KG G G G+ G KG +GD+G G G G
Sbjct: 254 KGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
Score = 33.1 bits (72), Expect = 0.058
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 132
GL G +GDKG+ G G+ G I G KG+KG G G G G
Sbjct: 249 GLRGPKGDKGDKGDRGDQG---IQGF--KGDKGDKGDQGAQGAKG 288
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG 168
L G KGD G G+ GD+G G G+ G+ G A+G KG
Sbjct: 250 LRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQG--AQGAKG 288
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGI 189
G KGD G G +G KG+ G G+ G G+
Sbjct: 258 GDKGDRGDQGIQGFKGDKGDKGDQGAQGAKGL 289
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 98 GYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G G GD G +G +G +G +GF G+K +K
Sbjct: 249 GLRGPKGDKGDKG--DRGDQGIQGFKGDKGDK 278
>SB_1292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 36.3 bits (80), Expect = 0.006
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G + EG G G + G YA G GYP G+ V G + G GYP
Sbjct: 3 GYSAVEGYPSVGGYSAVEGYPAVGGYYAVG--GYPAVGGYYAVGGYPAVGGYYAVGGYPA 60
Query: 86 MGGDIGIQG 60
+GG + G
Sbjct: 61 VGGYYAVGG 69
Score = 31.1 bits (67), Expect = 0.23
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
G + EG G G + G YA G GYP G+ V G + G GY
Sbjct: 15 GYSAVEGYPAVGGYYAVGGYPAVGGYYAVG--GYPAVGGYYAVGGYPAVGGYYAVGGYYA 72
Query: 86 MGGDIGIQG 60
+GG + G
Sbjct: 73 VGGYYAVGG 81
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -3
Query: 212 GESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G + G YA G GYP G+ V G + G GY +GG + G
Sbjct: 45 GYPAVGGYYAVG--GYPAVGGYYAVGGYYAVGGYYAVGGYYAVGGYPSVGG 93
>SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029)
Length = 367
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
KGEKG G G+ G KG +GD+G G G+ GD
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGD 139
Score = 30.3 bits (65), Expect = 0.41
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETG 210
KGD G+ G +GDKG+ G G G
Sbjct: 113 KGDQGIQGVKGDKGDKGDQGAQG 135
Score = 30.3 bits (65), Expect = 0.41
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESL 201
G +G G+ G++GDKG+ G G G+ L
Sbjct: 114 GDQGIQGVKGDKGDKGDQGAQGVKGDPL 141
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYP 162
KG+ G ++GD+G G G+ G+ G A+G KG P
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQG--AQGVKGDP 140
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 188 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 63
+ +G G G PG G G G RG G+ G PG G G+Q
Sbjct: 74 WLRGRDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGVQ 115
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -3
Query: 122 IRGDQGSDGYPGMGGDIGIQG----TSQQGPKGFKGFSG 18
+RG G DG PG+ G G G +GP G +G SG
Sbjct: 75 LRGRDGRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSG 113
>SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 176 EKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG-DIGIQGTSQQGPKGFKGFSGE 15
E G PGY G G G ++G +GY G GG + G + + G +G GE
Sbjct: 393 EDGNPGYGGSQFRGGSSGNGAEEGDNGYSGGGGAGLNSNGRNNKNFGGSRGTGGE 447
Score = 29.1 bits (62), Expect = 0.94
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 248 GDKGEIGPPGETGESLIDGIYAKG-EKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
G E G PG G G G E+G GY G G R ++ G G GG+
Sbjct: 389 GSINEDGNPGYGGSQFRGGSSGNGAEEGDNGYSGGGGAGLNSNGRNNKNFGGSRGTGGEG 448
Query: 71 G 69
G
Sbjct: 449 G 449
>SB_22690| Best HMM Match : Collagen (HMM E-Value=0.042)
Length = 593
Score = 34.7 bits (76), Expect = 0.019
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 272 DMGLTGEEGDKGEIGPP-GETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
D G+ G +G G G G+ G+ G+ G G G NG G GD GSDG
Sbjct: 30 DDGVDGSDGSNGNGGDDDGDDGDGGNCDDDDSGDDGSDGNAG-NGSDGDDDDSGDDGSDG 88
Query: 95 YPGMGGD 75
G G D
Sbjct: 89 NAGNGSD 95
Score = 32.7 bits (71), Expect = 0.076
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEK--GYPGYPGFNGVPGRKGIRGDQGS 102
GD G G G+ G G ++G+ DG G G G G +G G GD GS
Sbjct: 62 GDDGSDGNAGN-GSDGDDDDSGDDGSDGNAGNGSDNDGSDGNGGEDGSDGAGDNDGDDGS 120
Query: 101 DGYPGMGG 78
DG GG
Sbjct: 121 DGEADDGG 128
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Frame = -3
Query: 272 DMGLTGEEGDKGEIGPPG-ETGESLIDGIYAKGEKGYPGYP-GFNGVPGR--KGIRGDQG 105
D G+ G +G G G + + +DG + G G G G +G G GD G
Sbjct: 8 DGGVDGSDGSNGNGGDDDVDDADDGVDG--SDGSNGNGGDDDGDDGDGGNCDDDDSGDDG 65
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 9
SDG G G D + G G G + +
Sbjct: 66 SDGNAGNGSDGDDDDSGDDGSDGNAGNGSDND 97
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGM 84
+G PG PG G G G+RG++G G PG+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGV 150
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKG 237
G KGD G+ GE+GD+G
Sbjct: 131 GPKGDPGVRGEKGDRG 146
>SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 152 GFNGVPGRKGIRGDQGSDG-YPGMGGDIGIQGTSQQG 45
GF G PG G+ G+QG G + G+ GD G G S G
Sbjct: 1 GFKGEPGPPGLPGEQGPQGKFGGLLGDGGFGGASYGG 37
Score = 30.3 bits (65), Expect = 0.41
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGR-KGIRGDQGSDGYPGMGGDI 72
KGE G PG PG G G+ G+ GD G G GG++
Sbjct: 3 KGEPGPPGLPGEQGPQGKFGGLLGDGGFGG-ASYGGEM 39
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
G KG PG PG G G +G G DG G GG
Sbjct: 1 GFKGEPGPPGLPGEQGPQGKFGGLLGDG--GFGG 32
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
KG+K G G GV KG +GDQG+ G G
Sbjct: 352 KGDKDDKGDQGMQGVKDEKGDKGDQGAQGVKG 383
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 188 YAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGY 93
+ +G +G G G G PG G+RGD+G D +
Sbjct: 237 FKQGLQGPKGERGPPGAPGAAGVRGDRGDDSW 268
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
KG+KG G G+ G K +GD+G G G+ G+
Sbjct: 349 KGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQGVKGN 384
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 296 AFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKG 168
A L G KGD G ++GD+G G E G+ G A+G KG
Sbjct: 343 ASLQGPKGDKGDKDDKGDQGMQGVKDEKGDKGDQG--AQGVKG 383
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDG 192
G +G KGE GPPG G + + G
Sbjct: 240 GLQGPKGERGPPGAPGAAGVRG 261
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 134 GRKGIRGDQGSDGYPGMGGDIG 69
G +G RG+QG G PG G G
Sbjct: 12 GVQGPRGEQGPQGAPGRDGSSG 33
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 33.5 bits (73), Expect = 0.044
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
KG++G G PG G+PG +G +G QG+ G
Sbjct: 490 KGDRGPAGPPGPRGLPGAQGPQGIQGTPG 518
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -3
Query: 266 GLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
G G +GD+G GPPG G + G A+G +G G PG
Sbjct: 485 GAAGPKGDRGPAGPPGPRG---LPG--AQGPQGIQGTPG 518
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 57
G G G +G G G G PG G GIQGT
Sbjct: 485 GAAGPKGDRGPAGPPGPRGLPGAQGPQGIQGT 516
>SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 33.1 bits (72), Expect = 0.058
Identities = 29/91 (31%), Positives = 37/91 (40%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG+ + D + G GD+ + G+ G IG PG + D Y G PGY
Sbjct: 57 PGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHM-MIIGDPGYVM-IIGDPGYG 114
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G PG I GD G G G + I G
Sbjct: 115 MIIGDPGHVIIIGDPGDVMIIGDPGHVMIIG 145
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPG 219
PG+ + D + G GD+ + G+ G IG PG
Sbjct: 111 PGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPG 148
>SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)
Length = 188
Score = 33.1 bits (72), Expect = 0.058
Identities = 29/91 (31%), Positives = 37/91 (40%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG+ + D + G GD+ + G+ G IG PG + D Y G PGY
Sbjct: 51 PGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHM-MIIGDPGYVM-IIGDPGYG 108
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
G PG I GD G G G + I G
Sbjct: 109 MIIGDPGHVIIIGDPGDVMIIGDPGHVMIIG 139
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPG 219
PG+ + D + G GD+ + G+ G IG PG
Sbjct: 105 PGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPG 142
>SB_50127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 32.7 bits (71), Expect = 0.076
Identities = 33/81 (40%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G G+ G DKG G G G + G A G G G NG G GI D+G+DG
Sbjct: 25 GGYGMIGIGIDKGN-GGYGMIGIGIDKGNGAYGMIGI-GIDKGNGEYGMMGIGKDKGNDG 82
Query: 95 YPGMGGDIGI-QGTSQQGPKG 36
Y GM G IGI +G G G
Sbjct: 83 Y-GMIG-IGIDKGNGAYGMIG 101
Score = 27.5 bits (58), Expect = 2.9
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G+ G+ G DK G G G + G G G G NG G KGI D+G+ G
Sbjct: 137 GEYGMIGIGIDKSN-GGYGMIGICIDKGNSEYGMIGI-GIDKGNGGYGMKGIGIDKGNGG 194
Query: 95 YPGMGGDIGI 66
Y GM G IGI
Sbjct: 195 Y-GMIG-IGI 202
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 32.7 bits (71), Expect = 0.076
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAK-GEKGYPGYPGFNGVPGRKGIRGDQ 108
G+ G G E G+ E+G E GE +G+ ++ GE G G +G G+
Sbjct: 765 GEAGKAGEASEAGEASEVGEASEAGE---NGVASEAGEDGEASEAGEDGEASEASEAGEA 821
Query: 107 GSDGYPGMGGDIGIQG-TSQQGPKGFKGFSGEKEE 6
G + G + G G G +GE E
Sbjct: 822 SEASEAGEASEASEAGEAGEAGEAGEAGEAGEAGE 856
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 32.7 bits (71), Expect = 0.076
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGE 174
G G G+ GEEG G GP G+ G + ++G KGE
Sbjct: 76 GVPGPRGMQGEEGPAGNKGPQGDPGPAAMEG--NKGE 110
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -3
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
R G G +G G PG+ G G+QG ++GP G KG G+
Sbjct: 62 RAGGPGRRGPVGPPGVPGPRGMQG--EEGPAGNKGPQGD 98
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-KGEKG 168
G G G+ G G +GE GP G G G A +G KG
Sbjct: 70 GPVGPPGVPGPRGMQGEEGPAGNKGPQGDPGPAAMEGNKG 109
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 32.7 bits (71), Expect = 0.076
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -3
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
K Y GY PG KG +G QG G PG+ G G G
Sbjct: 229 KHYFGYGPLLCSPGAKGAQGAQGPKGNPGLRGRPGATG 266
>SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
KG+ G G G PGR G RG +G+ G G GG G G GP+G F +E
Sbjct: 333 KGDSRGGGRGGRGGRPGRGG-RGGRGASGGRGRGGGRGGFG-GGAGPQGEGHFEINSDE 389
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 134 GRKGIRGDQGSD--GYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
G ++ +QG D G+ GG+ G +GT +G GF G ++ +
Sbjct: 127 GDSPVKVEQGGDRGGFGSRGGNRGARGTGGRGRGGFGANRGGRKRE 172
>SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 417
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGD 111
+G KG G PG +G PG +G RGD
Sbjct: 256 QGPKGERGLPGASGAPGARGDRGD 279
>SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078)
Length = 102
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ 63
G G PG G G G RG G+ G PG G G+Q
Sbjct: 4 GRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGVQ 39
>SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9)
Length = 293
Score = 31.5 bits (68), Expect = 0.18
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Frame = -3
Query: 326 WPGVT-----PDXPMAFLFGQKGDMGLTGEEGDK--GEIGPPGETGESLIDGIYAKGEKG 168
WPG T + + G G G G G GP GE G++ ++G G
Sbjct: 162 WPGGTGGNGATSTSSSHVGGGGGGFYTDGSSGSNFGGAYGPGGEGGKAFLNG-------G 214
Query: 167 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGP 42
G +NGVPG G G +G G GG G G P
Sbjct: 215 VGGRSVWNGVPGGFGGGGGVWGNGGGGGGGG-GYSGGGSGNP 255
>SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 116
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGD 111
+G KG G PG +G PG +G RGD
Sbjct: 43 QGPKGERGPPGASGAPGARGDRGD 66
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETG 210
G +G KGE GPPG +G
Sbjct: 41 GLQGPKGERGPPGASG 56
>SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 536
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGD 111
+G KG G PG +G PG +G RGD
Sbjct: 191 QGPKGERGPPGASGAPGARGDRGD 214
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETG 210
G +G KGE GPPG +G
Sbjct: 189 GLQGPKGERGPPGASG 204
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -3
Query: 242 KGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
+G +GP G G G +G G G NG G +G G GS G PG G
Sbjct: 418 EGPMGPRGYNGSI--------GPQGLAGAEGHNGTQGIQGPMGVNGSAGVPGPPG 464
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
GP G G + G KG++G G G G G +G +GDQG G
Sbjct: 38 GPMGPRGYNGSQG--PKGDQGVQGPIGPQGYNGTQGPKGDQGVKG 80
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 263 LTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
+ G G +G G G G+ + G G +GY G G G G KG+ GD
Sbjct: 36 MEGPMGPRGYNGSQGPKGDQGVQGPI--GPQGYNGTQGPKGDQGVKGV-GD 83
>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 248 GDKGEIGPPGETGESLIDGIYA-KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
G +G+ G G++ + G+ K G GVPG K + G +G++ PGM G+
Sbjct: 1448 GVRGDACVTGVRGDACVPGVRVNKCVPEVRGDQCVPGVPGNKCVPGVRGAECLPGMRGNN 1507
Query: 71 G 69
G
Sbjct: 1508 G 1508
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
+G +G G G NG G G +G QG +G PG
Sbjct: 225 RGPQGIQGPMGMNGSKGVPGPQGPQGLEGPPG 256
>SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1357
Score = 30.3 bits (65), Expect = 0.41
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGE 207
G GD G G+EGD G+ G G+ G+
Sbjct: 818 GDDGDEGDDGDEGDNGDEGDDGDEGD 843
Score = 29.5 bits (63), Expect = 0.71
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDG 192
+GD G G++GD+G+ G G+ G+ DG
Sbjct: 817 EGDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLID 195
G +GD G G+ GD+G+ G G+ G + D
Sbjct: 821 GDEGDDGDEGDNGDEGDDGDEGDDGSTSDD 850
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDG 192
G +GD G G++GD+G+ G + + + DG
Sbjct: 827 GDEGDNGDEGDDGDEGDDGSTSDDRDEVDDG 857
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
+G+ G G G G G +G GD+G DG
Sbjct: 817 EGDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES 204
G T + A + G+ G++ GE G+ G+ GETGE+
Sbjct: 256 GETVEASEAGVAGEVGEVSEAGEAGEVGKASEAGETGEA 294
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 320 GVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGES 204
G T + A + G+ G++ G G+ G+ GETGE+
Sbjct: 112 GETVEASEAGVAGEVGEVSEAGVAGEVGKASEAGETGEA 150
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGES 204
G+ GE G+ GE GETGE+
Sbjct: 468 GEASEAGEAGEIGEASEAGETGEA 491
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 188 YAKGEKGYPGYPG-FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
Y +G +G GY G +N ++G G++ GY G GG G G +G G+ G
Sbjct: 727 YQRGGRGGGGYGGGYNDRRMQQGGYGNRSGGGYRG-GGGYGGGGGGYRGGGGYGG 780
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 30.3 bits (65), Expect = 0.41
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
GP G G + G KG++G G G G G +G +GDQG
Sbjct: 365 GPMGPRGYNGSQG--PKGDQGVQGPVGPQGYNGTQGSKGDQG 404
Score = 29.1 bits (62), Expect = 0.94
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
G +G G G G G +G G QGS G G+G
Sbjct: 374 GSQGPKGDQGVQGPVGPQGYNGTQGSKGDQGVG 406
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 57
G G G G +G +GDQG G G G G QG+
Sbjct: 365 GPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQGS 399
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
G PG G G PG KG RG G G G G G
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAGPIGNPGKPG 34
Score = 29.9 bits (64), Expect = 0.54
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETG 210
G+ GD G GE+G +G GP G G
Sbjct: 4 GRAGDAGKPGEKGSRGPPGPAGPIG 28
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETG 210
G G G G+ G+KG GPPG G
Sbjct: 1 GIPGRAGDAGKPGEKGSRGPPGPAG 25
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 206 SLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
+L + I A EK G PG NG G G GD G G G G G
Sbjct: 590 TLNEQIKALSEK--EGLPGVNGTSGPPGPPGDMGPPGLNGTRGPPG 633
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Frame = -3
Query: 230 GPPGETGESLIDG-IYAKGEKGYPGYPGFNGVPGRK-------GIRGDQGSDGYPGMGG 78
GPP ++ G Y G++ YPG + G PG G QG + YP GG
Sbjct: 129 GPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQGQPYPGQSYPQGQEPYPEKGG 187
Score = 29.1 bits (62), Expect = 0.94
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 16/103 (15%)
Frame = -3
Query: 329 GWPGVTPDXPMAFLFG--QKGDMGLTGEEGDKGEIGPPGETGES-----LIDGIYAKGEK 171
G+PG P P Q+G G++ G+ PG+ G S Y +G++
Sbjct: 121 GYPGQQPGGPPPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQGQPYPGQSYPQGQE 180
Query: 170 GYP---GYPG-----FNG-VPGRKGIRGDQGSDGYPGMGGDIG 69
YP GYP +G PG+ G+ G G P MGG G
Sbjct: 181 PYPEKGGYPPAGVGQHSGPYPGQPGMWGPPPMGGPPPMGGPPG 223
>SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07)
Length = 287
Score = 29.9 bits (64), Expect = 0.54
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDG-----IYAKGEKGYPGYPGFNGVPGRKGIRGD 111
G+ G G G G T +S + G Y G+ G G G G+ + G
Sbjct: 189 GNSGYGGAAWPGGTAGNGATTADSNVSGGGGGGFYTDGQ-GSRNKGGSGGEGGKAFLHGG 247
Query: 110 QG-----SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G S+ Y G GG G G + G G G+SG
Sbjct: 248 VGGRQFSSNSYGGFGGGGGACGCNGGGAGGGGGYSG 283
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 29.5 bits (63), Expect = 0.71
Identities = 30/101 (29%), Positives = 37/101 (36%)
Frame = -3
Query: 314 TPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP 135
+PD A L G D G KG G G + G G KG + G +G
Sbjct: 341 SPDLD-ASLEGTDVDFRGPSFNGPKGGASFDGPGGS--LRGPSFDGPKGGASFGGPDGSL 397
Query: 134 GRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
G +G + G G + G S GPKG F G K
Sbjct: 398 RGPSFDGPKGGVSFNGPDGSLS--GPSFDGPKGGASFGGPK 436
Score = 26.2 bits (55), Expect = 6.6
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 1194 KGDIDTT-DINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 1246
Query: 98 GYPGMGGDIGIQGTSQQGPK 39
G G GDI G GPK
Sbjct: 1247 GGKGKSGDIDYDGPDFDGPK 1266
>SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56)
Length = 697
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGG 78
G NG+ G G+RG G +G GM G
Sbjct: 516 GLNGIGGMNGMRGIGGMNGMDGMRG 540
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 29.1 bits (62), Expect = 0.94
Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGE--IGPPGETGESLI--DGIYAKGEKGY 165
P PG P + G M ++G G +G + G TG+ + G G +
Sbjct: 618 PRPPGDGVAGPAQGMQRMPGPMPMSGHLGPQGPPVVYQKGPTGQPPVATSGAQMAGPEAS 677
Query: 164 PGYPGFNG---VP-GRKG-IRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKE 9
P +P G +G +R GS YPG G G QGP G K G E
Sbjct: 678 LNVPSSQSSQRLPQGMEGAVRLQMGSPSYPGQFGPQGGVPPRLQGPMGMKVGVGSTE 734
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKG 123
G PG+PGFNG PGR G
Sbjct: 239 GMPGFPGFNG-PGRIG 253
>SB_38267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 260 TGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGV 138
T E D + P G+ G GI KG +G+ Y GF V
Sbjct: 180 TMETKDGFNVVPDGDNGAKARIGIVGKGAQGWDSYIGFGTV 220
>SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 296 AFLFGQKGDMGLTGEEGDKGEIG 228
A L GQKGD G G++GD+G G
Sbjct: 101 ASLQGQKGDKGDKGDKGDQGAQG 123
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -1
Query: 259 LAKKEIREKLAHLEKLENH*LMAFMLKEKKDIQDTLASMVYPGEK--VFEGIRVQMGTQV 86
LA+K R+KL ++ + + ++++KK++QD V EK + EGIR + G +
Sbjct: 4300 LAEKR-RKKLEAQKRKQEREMTREVMEQKKELQDIRTEHVKEAEKQAMIEGIR-ENGVEA 4357
Query: 85 WEVILEYRVHHNKDQRASKDL 23
E ++ +V + + KDL
Sbjct: 4358 AEFVIR-KVLDKRQGQELKDL 4377
>SB_28449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 181 KEKKDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHHNKDQRASKDLVEKKKK 5
+EK ++ S +Y GE+VF+GI + +G + LE RV D K +K
Sbjct: 59 EEKSEVFLRALSNIY-GEEVFDGINLDLGFADDSLALERRVDIGNDTTTDNKKEPKSEK 116
>SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59)
Length = 487
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 299 MAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDG 192
M F G KGD G G++G G GP G E G
Sbjct: 84 MTFKQGLKGDPGRDGKDGKVGPQGPQGLRDEPFAYG 119
>SB_46911| Best HMM Match : MSSP (HMM E-Value=4.4)
Length = 424
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGP 42
+ E PGY GF V ++ + DQ PGM GD + + +GP
Sbjct: 212 RSEPDNPGYSGFQNVAMQENVNQDQ--HVIPGM-GDYKVAPSDNRGP 255
>SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021)
Length = 697
Score = 28.7 bits (61), Expect = 1.2
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = -3
Query: 284 GQK--GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
GQK GD+ T + KG+I P + IDG A + PG+ F G P +G
Sbjct: 215 GQKVEGDID-TPDVNVKGDIDTPDVNVKGDIDGPDA--DINGPGWK-FKG-PKMPKFKGP 269
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPK 39
S G G GDI ++G +GPK
Sbjct: 270 --SFGGKGKSGDIEVEGPGFKGPK 291
Score = 26.2 bits (55), Expect = 6.6
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 52 KGDIDTT-DINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 104
Query: 98 GYPGMGGDIGIQGTSQQGPK 39
G G GDI G GPK
Sbjct: 105 GGKGKSGDIDYDGPDFDGPK 124
>SB_27528| Best HMM Match : Epimerase (HMM E-Value=3.2e-06)
Length = 441
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 181 KEKKDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHHNKDQRASKDLVEKKKK 5
+EK ++ S +Y GE+VF+GI + +G + LE RV D K +K
Sbjct: 360 EEKSEVFLRALSNIY-GEEVFDGINLDLGFADDSLALERRVDIGNDTTTDNKKEPKSEK 417
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 28.7 bits (61), Expect = 1.2
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = -3
Query: 284 GQK--GDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
GQK GD+ T + KG+I P + IDG A + PG+ F G P +G
Sbjct: 892 GQKVEGDID-TPDVNVKGDIDTPDVNVKGDIDGPDA--DINGPGWK-FKG-PKMPKFKGP 946
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPK 39
S G G GDI ++G +GPK
Sbjct: 947 --SFGGKGKSGDIEVEGPGFKGPK 968
Score = 25.8 bits (54), Expect = 8.8
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 31 KGDID-TPDINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 83
Query: 98 GYPGMGGDIGIQGTSQQGPK 39
G G GDI G GPK
Sbjct: 84 GGKGKSGDIDYDGPDFDGPK 103
Score = 25.8 bits (54), Expect = 8.8
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 272 KGDID-TPDINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 324
Query: 98 GYPGMGGDIGIQGTSQQGPK 39
G G GDI G GPK
Sbjct: 325 GGKGKSGDIDYDGPDFDGPK 344
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 197 DGIYAKGEKGYPGYPGFNGVPGRKGIR--GDQGSDGYPGMGGDIGIQ 63
DG G+ GY G G G G GI GD G DG GGD G+Q
Sbjct: 1200 DGSDDGGDGGYGGSDG-GGDGGYGGIDSGGDGGCDGGIDGGGDGGLQ 1245
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
+G G PG G G+ G G G QGS G G
Sbjct: 171 QGPMGAPGVQGIQGMRGPPGPPGPQGSLGPAG 202
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPG 87
+G G PG G G+ G G G QGS G G
Sbjct: 153 QGPMGAPGVQGIQGMRGPPGPPGPQGSLGPAG 184
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 169 DIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHH 53
D++ + GE +EG ++G QVW ++ +++V H
Sbjct: 345 DLEKNVKKESAEGEPAWEGAGKEVGVQVWRIV-KFKVTH 382
>SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.9 bits (59), Expect = 2.2
Identities = 31/92 (33%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = -3
Query: 290 LFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGD 111
L G KG G T G G GET + + Y KG G PG G +G G
Sbjct: 231 LEGYKGGQGGTSSGGG----GYGGET-YACLSSTYGKG--GDRNQPGNAGGGAGEGSTGG 283
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKG-FSG 18
G G GGD G G G FSG
Sbjct: 284 PGGINAGGGGGDSTTDSDDGAGGGGGGGHFSG 315
>SB_57480| Best HMM Match : MFS_1 (HMM E-Value=0.0025)
Length = 930
Score = 27.5 bits (58), Expect = 2.9
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -3
Query: 281 QKGDMGLTG-EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG--IRGD 111
++G+ + G +E D+ I P E GE+ I G +GE G P G G +G+
Sbjct: 607 EQGEATIVGPDEPDEATIVGPDEQGEATIVGPDEQGEATIVG-PDEQGEATIVGPNEQGE 665
Query: 110 QGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
+G P G+ I G ++QG +G
Sbjct: 666 ATIEG-PDEQGEATIVGPNEQGEATIEG 692
Score = 26.6 bits (56), Expect = 5.0
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = -3
Query: 281 QKGDMGLTG--EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKG--IRG 114
++G+ + G E+G+ +GP E GE+ I+G +GE G P G G +G
Sbjct: 662 EQGEATIEGPDEQGEATIVGP-NEQGEATIEGPEEQGEATIVG-PNEQGEATIVGPDEQG 719
Query: 113 DQGSDGYPGMGGDIGIQGTSQQG 45
+ +G P G+ I G +QG
Sbjct: 720 EATIEG-PDEQGEATIVGPDEQG 741
Score = 25.8 bits (54), Expect = 8.8
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -3
Query: 317 VTPDXP-MAFLFG--QKGDMGLTG-EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPG 150
V PD P A + G ++G+ + G +E D+ I P E GE+ I G +GE G P
Sbjct: 471 VGPDEPDEATIVGPNEQGEATIVGPDEPDEATIVGPDEQGEATIVGPDEQGEATIVG-PD 529
Query: 149 FNGVPGRKGIRGDQGSDGY--PGMGGDIGIQGTSQQG 45
G G +QG P G+ I G +QG
Sbjct: 530 EQGEATIVG-PDEQGEATIVGPDEPGEATIVGPDEQG 565
>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYP 90
G+ G NG+ G I G G+ GYP
Sbjct: 419 GFNGLNGMNGIHQINGQVGNTGYP 442
>SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088)
Length = 69
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIG 69
G+ G G G +G G GD G DG G GD G
Sbjct: 28 GDDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDG 64
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -3
Query: 254 EEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
++GD G+ G G+ G+ GE G G +G G G GD G D
Sbjct: 23 DDGDDGDDGDDGDDGDD--------GEDDDDGEDGDDGDDGDDGDDGDDGDD 66
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGD 75
G+ G G G + G G GD G DG G GD
Sbjct: 31 GDDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDGD 65
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 176 EKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
+ G G G +G G G D G DG G GD G G
Sbjct: 23 DDGDDGDDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDG 61
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 118 RIPFLPGTPLKPGYPGYPFSP 180
R P PG P PG+P P SP
Sbjct: 142 RSPVSPGIPRSPGFPKSPRSP 162
>SB_33814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 161 GYPGFNGVPGRKGIRGDQGSDGYP 90
G+ G NG+ G I G G+ GYP
Sbjct: 108 GFNGLNGMNGIHQINGQVGNTGYP 131
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGES--LIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
+ G+ TGE G E G ETGE+ + A GE G G G +
Sbjct: 31 EAGEASETGEAGKASEAGEASETGEASEASETGEATGEAGEASETGEASEASEAGEASET 90
Query: 107 GSDGYPGMGGDIG 69
G G + G
Sbjct: 91 GEAGKASEASETG 103
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGES 204
G+ G+ TGE + E G ETGE+
Sbjct: 67 GEAGEASETGEASEASEAGEASETGEA 93
>SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = -3
Query: 167 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI-----GIQGTSQQGPKGFKGFSG 18
+ G+ GF G GS PG+ ++ G G GF GFSG
Sbjct: 6 FQGFTGFKGFSSTSSADVFGGSKTLPGISSNLNPKPTGFSGFGCNSTAGFSGFSG 60
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 130 LPGTPLKPGYPGYPFSP 180
+PG P+ P YPG P P
Sbjct: 56 VPGMPMPPAYPGMPTYP 72
>SB_45669| Best HMM Match : RVT_1 (HMM E-Value=0.14)
Length = 682
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -1
Query: 223 LEKLENH*LMAFMLKEKKDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRVHHNKD 44
L K H K+K + +++ + Y K ++ + GTQ E ILE+ + D
Sbjct: 206 LPKKNKHHARYTFNKQKMETNESIVT--YAARKRYQAKECEFGTQDDERILEHLIQTISD 263
Query: 43 QRASKDLVEKKK 8
K +EK++
Sbjct: 264 GDLVKRAIEKRR 275
>SB_35852| Best HMM Match : Collagen (HMM E-Value=0.18)
Length = 283
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Frame = -3
Query: 284 GQKGDMGLTGEEG--------DKGEIGPPGETGESLI--DGIYAKGEKGYPGYPGFNGVP 135
G GD G+ ++G + G G G ++ DG++ G G +GV
Sbjct: 15 GGVGDDGVVNDDGGVNDDSVVNDGVFGDDGVVNYGVVGDDGVFGDNGVVNDGVVGDDGVV 74
Query: 134 GRKGIRGDQGSDGYPGMGGDIGIQG 60
G+ D G G G+ D G+ G
Sbjct: 75 NDDGVIDDDGVVGNDGVVNDDGLVG 99
>SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 281 QKGDMGLTGEEGDKGEIGPPGETGES 204
+ G+ GE + GE+G GE GE+
Sbjct: 51 EAGEASEAGEASEAGEVGEAGEAGEA 76
>SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0)
Length = 808
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
GY PG++ VPG G GY G + G
Sbjct: 700 GYDWVPGYDWVPGYDWFSGSDWVSGYDWFSGSDWVSG 736
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 66 YSNITSHTWVPI*TLIPSNTFSPGYTIEARVSWIS 170
Y ++ H WVP +P + PGY W S
Sbjct: 683 YDWVSGHDWVPGYDWVPGYDWVPGYDWVPGYDWFS 717
>SB_57619| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 616
Score = 26.6 bits (56), Expect = 5.0
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Frame = -3
Query: 245 DKGEIGPPGETGESLIDGIYAKGEKGYPGYP---GFNGVPGR------KGIRGDQGSDGY 93
DKG++ PG S+ DG+ KG G G+ G KGI+G+ G
Sbjct: 21 DKGKLTCPGRLVTSMKDGVLVFDPKGIEGEVLVFDLKGIEGEVLVFDLKGIKGEVLVFGL 80
Query: 92 PGMGGDI---GIQGTSQQ 48
G+ G + ++GT+ Q
Sbjct: 81 KGIKGKVLVFDLKGTNVQ 98
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 26.6 bits (56), Expect = 5.0
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = -3
Query: 254 EEGDKGEIGPPGETGESLIDGIYA--KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
EE K + P E + D A K EK G G G G G G GY G+G
Sbjct: 311 EEKPKAKRDAPETKTEKVADAPTAADKKEKSAKRCCGGCGC-GYGGWGGYGGLGGYGGLG 369
Query: 80 GDIGIQGTSQQGPKGFKG 27
G G G + G GF G
Sbjct: 370 GYGGFLGHAGFGGWGFPG 387
>SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKG 168
G G +G++GP G+ G + DG+ +G KG
Sbjct: 351 GRPGPQGKMGPQGDPGPAGKDGL--RGPKG 378
>SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1496
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
PGF VP K D G DG G D G G G
Sbjct: 1399 PGFYDVPREKENVSDGGDDGNGGGDDDDDYDGCGDDGGDG 1438
>SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 413
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 185 AKGEKGYPGY-PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGF 33
A+G PGY PG+ G P + G G P MG D G G S P +
Sbjct: 150 AQGPYQPPGYYPGY-GAPPQGNYAGGYTPGGQPSMGMDNG--GASYAPPPSY 198
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSPLA 186
P P TP+ PG P P +P A
Sbjct: 156 PSTPSTPITPGTPSTPSTPSA 176
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSP 180
P P TP PG PG P +P
Sbjct: 500 PSTPSTPSAPGTPGTPSTP 518
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSPLA 186
P P TP+ PG P P +P A
Sbjct: 706 PSTPSTPITPGTPSTPSTPSA 726
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSPL 183
P +P TPL PG P P +PL
Sbjct: 206 PPMPETPLPPGSPHIPPAPL 225
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 114 PSNTFSPGYTIEARVSWIS 170
PSN SPG + AR+SW++
Sbjct: 1243 PSNRKSPGSSPGARISWVT 1261
>SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 122 IRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
+ GD G DG G+GGD G G + G
Sbjct: 18 VDGDCGGDGGDGVGGDGGCCGDGEGNGDG 46
>SB_35485| Best HMM Match : CRAM_rpt (HMM E-Value=1)
Length = 178
Score = 26.2 bits (55), Expect = 6.6
Identities = 28/80 (35%), Positives = 35/80 (43%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
KGD+ T + KG+I P + IDG A + PG+ F G P +G S
Sbjct: 82 KGDIDTT-DINLKGDIDTPDVNVKGDIDGPDA--DVHGPGWK-FKG-PKMPKFKGP--SF 134
Query: 98 GYPGMGGDIGIQGTSQQGPK 39
G G GDI G GPK
Sbjct: 135 GGKGKSGDIDYDGPDFDGPK 154
>SB_3202| Best HMM Match : AFP (HMM E-Value=2.9)
Length = 460
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 173 KGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQ-QGPKGFKGFS 21
+G+ GFN + G ++G G+ + G I +QG ++ QG +GF+
Sbjct: 308 QGFNELQGFNELQGFNELQGFNELQGFNELQGFIELQGFNELQGFNELQGFN 359
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -3
Query: 134 GRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
G G GD G DG G GD G G G G+ ++
Sbjct: 1034 GDDGDDGDDGDDGDDGDDGDDDDDDDDDDGDDGDDGDDGDDDD 1076
>SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 119 RGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEEK 3
R + SDG GG++ +G Q +G KG EKE K
Sbjct: 305 RDSKRSDG----GGEMRTKGDCQGSNRGVKGGQSEKESK 339
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 158 YPGFNGVPGRKGIRGDQGSDGYPG 87
YP + P I G QG YPG
Sbjct: 937 YPRYTSTPSHPRIPGQQGVQRYPG 960
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 25.8 bits (54), Expect = 8.8
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPP--GETG-ESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRG 114
G D EG G + P G +G G + G G+PG G+ G P G G
Sbjct: 294 GHHSDKSSRNGEGSFGYLNPFAFGASGFNPAFAGFGSMGFGGFPGAFGYGGFPSGFGGFG 353
Query: 113 DQGSDGYPGMGGDIGIQGTSQQGPKGFKG 27
G+D G GT+ G +G
Sbjct: 354 -FGADKAGYSSESRGYSGTADPDVAGGRG 381
>SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)
Length = 1123
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
+ E PGY GF V ++ + DQ PGMG
Sbjct: 899 RSEADNPGYSGFQNVAMQENVNHDQ--HVIPGMG 930
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 263 LTGEEGDKGEIGPPG-ETGESLIDGIYAKGEKGY 165
L +E D+ EIG E ESL+D ++ KGE G+
Sbjct: 174 LNQKEVDEIEIGRTSRERIESLLDVLHYKGESGF 207
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,680,377
Number of Sequences: 59808
Number of extensions: 222647
Number of successful extensions: 2705
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -