Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31237
(334 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g28480.1 68418.m03462 hypothetical protein 38 0.001
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 38 0.001
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 38 0.001
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 37 0.004
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin... 36 0.007
At4g02450.1 68417.m00332 glycine-rich protein similar to several... 36 0.009
At2g37410.2 68415.m04588 mitochondrial import inner membrane tra... 33 0.036
At2g37410.1 68415.m04587 mitochondrial import inner membrane tra... 33 0.036
At1g04660.1 68414.m00463 glycine-rich protein 33 0.036
At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /... 32 0.083
At1g15840.1 68414.m01901 expressed protein 32 0.083
At1g06820.1 68414.m00727 carotenoid isomerase, putative similar ... 32 0.11
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 31 0.15
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 31 0.15
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 31 0.15
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 30 0.33
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 30 0.33
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 30 0.33
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 30 0.33
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 30 0.33
At1g26110.1 68414.m03186 expressed protein 30 0.44
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 29 0.77
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 29 0.77
At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family... 29 1.0
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 29 1.0
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 28 1.4
At4g19200.1 68417.m02833 proline-rich family protein contains pr... 28 1.4
At1g44222.1 68414.m05107 hypothetical protein 28 1.4
At1g06180.1 68414.m00650 myb family transcription factor identic... 28 1.8
At4g21620.1 68417.m03134 glycine-rich protein 27 2.4
At4g14300.1 68417.m02203 heterogeneous nuclear ribonucleoprotein... 27 2.4
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 27 2.4
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 27 2.4
At2g34870.1 68415.m04281 hydroxyproline-rich glycoprotein family... 27 2.4
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain... 27 2.4
At1g17640.1 68414.m02183 RNA recognition motif (RRM)-containing ... 27 2.4
At5g46730.1 68418.m05757 glycine-rich protein 27 3.1
At5g41520.1 68418.m05044 40S ribosomal protein S10 (RPS10B) cont... 27 3.1
At2g27300.1 68415.m03281 no apical meristem (NAM) family protein... 27 3.1
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 27 4.1
At3g51810.1 68416.m05682 Em-like protein GEA1 (EM1) identical to... 27 4.1
At3g29080.1 68416.m03641 hypothetical protein 27 4.1
At3g24250.1 68416.m03044 glycine-rich protein 27 4.1
At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein... 27 4.1
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 27 4.1
At1g54070.1 68414.m06161 dormancy/auxin associated protein-related 27 4.1
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 26 5.5
At1g44085.1 68414.m05090 glycine-rich protein similar to glycine... 26 5.5
At5g41250.1 68418.m05013 exostosin family protein contains Pfam ... 26 7.2
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 26 7.2
At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2) id... 26 7.2
At3g59590.1 68416.m06649 jacalin lectin family protein similar t... 26 7.2
At2g41060.1 68415.m05070 RNA recognition motif (RRM)-containing ... 26 7.2
At5g63120.2 68418.m07924 ethylene-responsive DEAD box RNA helica... 25 9.5
At5g63120.1 68418.m07925 ethylene-responsive DEAD box RNA helica... 25 9.5
At4g36440.1 68417.m05176 expressed protein 25 9.5
At4g29030.1 68417.m04151 glycine-rich protein glycine-rich prote... 25 9.5
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 25 9.5
At4g17980.1 68417.m02676 no apical meristem (NAM) family protein... 25 9.5
At3g42560.1 68416.m04418 hypothetical protein 25 9.5
At2g05380.1 68415.m00566 glycine-rich protein (GRP3S) identical ... 25 9.5
At1g79270.1 68414.m09241 expressed protein contains Pfam profile... 25 9.5
At1g14020.1 68414.m01656 expressed protein contains Pfam PF03138... 25 9.5
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/66 (39%), Positives = 27/66 (40%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G G GE GP G GE G GE G G G G G G GD+
Sbjct: 420 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSG--GDGEGGPNGADGEGGPNGADGEVGDEA 477
Query: 104 SDGYPG 87
D Y G
Sbjct: 478 FDKYAG 483
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -3
Query: 185 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQ-GTSQQGPKGFKGFSG 18
A GE+G G RK D G G G G+ G G + GP G G G
Sbjct: 391 ATGERGKDGCQILLKTKKRKISHSDDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGG 447
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/66 (39%), Positives = 27/66 (40%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G G GE GP G GE G GE G G G G G G GD+
Sbjct: 433 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSG--GDGEGGPNGADGEGGPNGADGEVGDEA 490
Query: 104 SDGYPG 87
D Y G
Sbjct: 491 FDKYAG 496
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/66 (39%), Positives = 27/66 (40%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G G GE GP G GE G GE G G G G G G GD+
Sbjct: 424 GPSGGDGEGGPSGGDGEGGPSGGDGEGGPSG--GDGEGGPNGADGEGGPNGADGEVGDEA 481
Query: 104 SDGYPG 87
D Y G
Sbjct: 482 FDKYAG 487
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 36.7 bits (81), Expect = 0.004
Identities = 29/92 (31%), Positives = 35/92 (38%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG PG P F G+ G+ G G + P G + G G PG P
Sbjct: 70 PGSPGFR--LPFPFPSSPGGNPGIPGSPGFRLPFPFPSSPGGN-------PGIPGIPGIP 120
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 57
G G+PG G R PG G GI G+
Sbjct: 121 GLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGS 152
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSP 180
P +PG P PG PG P SP
Sbjct: 111 PGIPGIPGIPGLPGIPGSP 129
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 121 IPFLPGTPLKPGYPGYP 171
IP +PG P PG PG P
Sbjct: 113 IPGIPGIPGLPGIPGSP 129
>At1g08420.1 68414.m00931 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344 kelch motif
Length = 1018
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 245 DKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGV--PGRKGIRGDQGSDGYPGMGGDI 72
DK E GP G +L + A G++G PGY G V G + G+ G G P G
Sbjct: 96 DKKEDGPGPRCGHTLT-AVPAVGDEGTPGYIGPRLVLFGGATALEGNSGGTGTPTSAGSA 154
Query: 71 GIQ 63
GI+
Sbjct: 155 GIR 157
>At4g02450.1 68417.m00332 glycine-rich protein similar to several
proteins containing a tandem repeat region such as
Plasmodium falciparum GGM tandem repeat protein
(GB:U27807)
Length = 241
Score = 35.5 bits (78), Expect = 0.009
Identities = 31/101 (30%), Positives = 45/101 (44%)
Frame = -3
Query: 308 DXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGR 129
D MA + G G MG G G G +G G G ++G+ G G G G+ G
Sbjct: 120 DMDMAGMEGM-GGMGGMGGMGGMGGMGGMGGMGG--MEGMDFSKLMG--GMGGMGGMGGL 174
Query: 128 KGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEKEE 6
+G+ G G G GMGG G++ + SG+K++
Sbjct: 175 EGLGGMGGMGGMGGMGGMGGMEEFEDSDDEEETAKSGDKKD 215
>At2g37410.2 68415.m04588 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 33.5 bits (73), Expect = 0.036
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
PG G+PG +G+ QG G PGM G G+QG
Sbjct: 148 PGMQGMPGMQGM---QGMPGMPGMQGMPGMQG 176
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
PG G G+ G +G+ G G G PGM G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G +G PG G G+PG G++G G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQ 108
+G +G PG PG G+PG +G++ Q
Sbjct: 157 QGMQGMPGMPGMQGMPGMQGMQMGQ 181
>At2g37410.1 68415.m04587 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 33.5 bits (73), Expect = 0.036
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 155 PGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG 60
PG G+PG +G+ QG G PGM G G+QG
Sbjct: 148 PGMQGMPGMQGM---QGMPGMPGMQGMPGMQG 176
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
PG G G+ G +G+ G G G PGM G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
G +G PG G G+PG G++G G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 182 KGEKGYPGYPGFNGVPGRKGIRGDQ 108
+G +G PG PG G+PG +G++ Q
Sbjct: 157 QGMQGMPGMPGMQGMPGMQGMQMGQ 181
>At1g04660.1 68414.m00463 glycine-rich protein
Length = 212
Score = 33.5 bits (73), Expect = 0.036
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 248 GDKGEIGP-PGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDI 72
GDK IG G G + + G+ G G P G G+ GI G G G+ +GG
Sbjct: 58 GDKKCIGGVAGVGGFAGVGGVAGVGGLGMPLIGGLGGIGKYGGIGGAAGIGGFHSIGGVG 117
Query: 71 GIQGTSQQGPKGFKGFSG 18
G+ G G G G G
Sbjct: 118 GLGGVG-GGVGGLGGVGG 134
>At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /
glycine-rich protein (GRP2) identical to Glycine-rich
protein 2b (AtGRP2b) [Arabidopsis thaliana]
SWISS-PROT:Q38896; contains Pfam domains PF00313:
'Cold-shock' DNA-binding domain and PF00098: Zinc
knuckle
Length = 201
Score = 32.3 bits (70), Expect = 0.083
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Frame = -3
Query: 278 KGDMGLTGEEGDKGEIGPPGETGESLIDGIYA-----KGEKGYPGYPGFN-----GVPGR 129
+G+ G G G +G G G G G Y +G G G G N G PG
Sbjct: 87 QGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGGDNSCFKCGEPGH 146
Query: 128 KGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFS 21
QG GY G GG G G+ G G G S
Sbjct: 147 MARECSQGGGGYSGGGGG-GRYGSGGGGGGGGGGLS 181
>At1g15840.1 68414.m01901 expressed protein
Length = 126
Score = 32.3 bits (70), Expect = 0.083
Identities = 32/82 (39%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETG-ESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMG 81
G EG GE G G G + DGI G G G G G KG G + DG +G
Sbjct: 45 GGEGTSGEGGGGGGDGTKGGGDGISGGGHGDGLGCSGGGG-DGTKG--GGRRGDG---LG 98
Query: 80 GDIGIQGTSQQGPKGFKGFSGE 15
+G +G + G G KGFSGE
Sbjct: 99 RGLG-RGGGRGGWNGRKGFSGE 119
>At1g06820.1 68414.m00727 carotenoid isomerase, putative similar to
carotenoid isomerase from Lycopersicon esculentum
[gi:19550437]; contains Pfam profile: PF02032 Phytoene
dehydrogenase related enzyme
Length = 595
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -3
Query: 314 TPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPG 159
TP FL KG G KG +G P T + IDG+Y G+ +PG
Sbjct: 501 TPRTHRRFLARDKGTYGPMPRGTPKGLLGMPFNT--TAIDGLYCVGDSCFPG 550
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.15
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 299 MAFLFGQKGDMGLT----GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 132
MA ++ Q G G G +G G G G G++ G A G Y G G+ G G
Sbjct: 1 MAGMYNQDGGGGAPIPSYGGDGYGGGGGYGG--GDAGYGGRGASGGGSYGGRGGYGGGGG 58
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
R G RG G GY GGD G +G+ G G
Sbjct: 59 R-GNRGG-GGGGY--QGGDRGGRGSGGGGRDG 86
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.15
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 299 MAFLFGQKGDMGLT----GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPG 132
MA ++ Q G G G +G G G G G++ G A G Y G G+ G G
Sbjct: 1 MAGMYNQDGGGGAPIPSYGGDGYGGGGGYGG--GDAGYGGRGASGGGSYGGRGGYGGGGG 58
Query: 131 RKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
R G RG G GY GGD G +G+ G G
Sbjct: 59 R-GNRGG-GGGGY--QGGDRGGRGSGGGGRDG 86
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 31.5 bits (68), Expect = 0.15
Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDK--GEIGPP---GETGESLIDGIYAKGEKGYPGYPGFNGVPGR-KG 123
G GD G G + + G P G G++ D + G YP G G G
Sbjct: 135 GSSGDSGSPGSDSGSPSADTGSPTDGGSYGDTTGDSGSSAGSPSYPSDDGSGSTAGGPSG 194
Query: 122 IRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGE 15
D + G MGGD G + + SG+
Sbjct: 195 STTDGSAGGESSMGGDSSSAGAAGESGSAATADSGD 230
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = -3
Query: 194 GIYAKGEKGYPGYPGFNGVPGRKGIRG---DQGSDGYPGMG 81
G Y GYP PG+ G P G G G GYP G
Sbjct: 52 GAYPPAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYPPAG 92
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 30.3 bits (65), Expect = 0.33
Identities = 30/105 (28%), Positives = 36/105 (34%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG P + P PM GQ G MG+ G G +GP G G G +G P
Sbjct: 329 PGGP-MGPGGPM----GQGGPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGLPMSG 383
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G PG Y M + Q QQ G+ G
Sbjct: 384 GGGYYPGPPQASQQMNQQQYMQMMMNQQQQQQQQQQAVAHGGYGG 428
Score = 26.2 bits (55), Expect = 5.5
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGR-KGI-RGDQGSDGYPGM 84
G G+ G P E +++G G G G G +P + KG+ G G DG G
Sbjct: 146 GHHGNGGGPKGPNEI-MMMMNGFKGGGGGGKKGGGGGFEIPVQMKGMGEGKNGKDGKKGK 204
Query: 83 GGDIG 69
GG+ G
Sbjct: 205 GGEKG 209
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 30.3 bits (65), Expect = 0.33
Identities = 30/105 (28%), Positives = 36/105 (34%)
Frame = -3
Query: 332 PGWPGVTPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYP 153
PG P + P PM GQ G MG+ G G +GP G G G +G P
Sbjct: 428 PGGP-MGPGGPM----GQGGPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGLPMSG 482
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G PG Y M + Q QQ G+ G
Sbjct: 483 GGGYYPGPPQASQQMNQQQYMQMMMNQQQQQQQQQQAVAHGGYGG 527
Score = 26.2 bits (55), Expect = 5.5
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGR-KGI-RGDQGSDGYPGM 84
G G+ G P E +++G G G G G +P + KG+ G G DG G
Sbjct: 245 GHHGNGGGPKGPNEI-MMMMNGFKGGGGGGKKGGGGGFEIPVQMKGMGEGKNGKDGKKGK 303
Query: 83 GGDIG 69
GG+ G
Sbjct: 304 GGEKG 308
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 176
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 212 GESL-IDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
G S+ ++ ++G G G+ G G R G G GY G GG G G ++G G
Sbjct: 76 GRSITVNEAQSRGSGGGGGHRGGGGGGYRSG-----GGGGYSGGGGSYGGGGGRREGGGG 130
Query: 35 FKGFSG 18
+ G G
Sbjct: 131 YSGGGG 136
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 30.3 bits (65), Expect = 0.33
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G+ GF G G G G+ G GG Q Q G GF F G
Sbjct: 852 GTGGFGGFAPQGSSGGFAGAAGGGGFGGFGG----QAQGQAGGGGFSAFGG 898
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 29.9 bits (64), Expect = 0.44
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGF 24
P NG PG+ G+ G Q + GG++G G S Q P ++GF
Sbjct: 131 PDISSHNGQPGQHGM-GFQNAMPLYQPGGNLGSWGASPQPPMYWQGF 176
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 29.1 bits (62), Expect = 0.77
Identities = 32/90 (35%), Positives = 32/90 (35%)
Frame = -3
Query: 287 FGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQ 108
FG G G G G G G G G G Y G GY G G G G G
Sbjct: 125 FGGGGYGGGGGGYGGSGGYG--GGAGGYGGSGGYGGGAGGYGGNSG-GGYGGNAA--GGY 179
Query: 107 GSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G G GGD T G G G SG
Sbjct: 180 GGSGAGGYGGD----ATGHGGAGGGYGSSG 205
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -3
Query: 152 GFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
GF G G G GS GY G G G G G G+ G SG
Sbjct: 124 GFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSG 168
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 29.1 bits (62), Expect = 0.77
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
G PG P F+G PG + GS +PG G
Sbjct: 179 GNPGSPDFSGNPGPPSFPRNPGSPEFPGNPG 209
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = -3
Query: 179 GEKGYPGY---PGFNGVPGRKGIRGDQGSDGY--PGMG 81
G G+PG PGF G P G G DGY PG G
Sbjct: 252 GPPGFPGIGGPPGFPGTPFGGGGTGPTLGDGYANPGFG 289
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSP 180
P+ PG P P PG P SP
Sbjct: 166 PYFPGYPESPDLPGNPGSP 184
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGT 57
G P P P G G G+PG+GG G GT
Sbjct: 231 GAPVIPRNPNPPVFPGNPRSMGPPGFPGIGGPPGFPGT 268
>At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family
protein contains proline-rich protein domains,
INTERPRO:IPR000694
Length = 189
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 121 IPFLPGTPLKPGYPGYPFSPL 183
IP +PG P PG PG PF L
Sbjct: 88 IPNIPGLPNIPGLPGPPFESL 108
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 28.7 bits (61), Expect = 1.0
Identities = 26/93 (27%), Positives = 35/93 (37%)
Frame = -3
Query: 314 TPDXPMAFLFGQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVP 135
T P A L G +G + G + P TG ++ + G G G P
Sbjct: 282 TGSNPFAALLGNQG-VTTQGSDASNNSSTPNAGTG-TIPNANPLPNPWGATG--GQTTAP 337
Query: 134 GRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
GR + GD S G G+GG + G G G
Sbjct: 338 GRTNVGGDARSPGLGGLGGLGSLGGLGGLGMLG 370
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/86 (31%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFN---------GVPGRKGIRGDQG 105
G G +G G G G G Y G GY G G G PG +G
Sbjct: 89 GSSGGRGGFGG-GRGGGRGSGGGYGGGGGGYGGRGGGGRGGSDCYKCGEPGHMARDCSEG 147
Query: 104 SDGYPGMGGDIGIQGTSQQGPKGFKG 27
GY G GG G G G G+ G
Sbjct: 148 GGGYGGGGGGYGGGGGYGGGGGGYGG 173
>At4g19200.1 68417.m02833 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 179
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 176 EKGYPGYPGFNGVPGRKGIRGDQG---SDGYPGMGG 78
EKG+ G+PG P +G QG GYP GG
Sbjct: 13 EKGFHGFPGGGHYPPAQGGYPPQGYPPQQGYPPAGG 48
>At1g44222.1 68414.m05107 hypothetical protein
Length = 85
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = -3
Query: 170 GYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
G G PG G PG GI G G GM G +GI G + G G G G
Sbjct: 3 GRLGRPGMLGSPGMLGI---LGMFGISGMVGRLGILG--RLGMMGIPGMLG 48
>At1g06180.1 68414.m00650 myb family transcription factor identical
to GB:CAA90748 GI:1263093 from [Arabidopsis
thaliana];contains PFAM profile:PF00249
Length = 246
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 88 VWEVILEYRVHHNKDQRASKDLV 20
VW L+ R+HH++DQ +D V
Sbjct: 107 VWHTHLKKRLHHSQDQNNKEDFV 129
>At4g21620.1 68417.m03134 glycine-rich protein
Length = 131
Score = 27.5 bits (58), Expect = 2.4
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = -3
Query: 185 AKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
A+ + G G GF GVPG I G +G+PG G G G GP G G G
Sbjct: 23 ARQKSGNDGL-GFGGVPGSGFIPG--FGNGFPGTGVG-GGYGGGFGGPSGGFGKGG 74
>At4g14300.1 68417.m02203 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 411
Score = 27.5 bits (58), Expect = 2.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 227 PPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRK--GIRGDQGSDGYPGMG-GDIGIQGT 57
P G + + G Y+ + GY + V GR G + GS GY G G GD +
Sbjct: 334 PSGYSNQGYGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSD 393
Query: 56 SQQGPKG 36
QG G
Sbjct: 394 PSQGYGG 400
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 191 IYAKGEK--GYPGYPGFNGVPGRKGIRGDQGSDGYP 90
+Y G++ YP Y GV GI G+ G+ YP
Sbjct: 82 VYGSGQEWTDYPAYTNPEGVDMNSGIYGENGTVVYP 117
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 191 IYAKGEK--GYPGYPGFNGVPGRKGIRGDQGSDGYP 90
+Y G++ YP Y GV GI G+ G+ YP
Sbjct: 85 VYGSGQEWTDYPAYTNPEGVDMNSGIYGENGTVVYP 120
>At2g34870.1 68415.m04281 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 116
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 124 PFLPGTPLKPGYPGYPFSPL 183
P P P PG+PG+ F PL
Sbjct: 89 PTSPPAPSLPGFPGFTFPPL 108
>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to NtN2 [Medicago truncatula] GI:3776084; contains Pfam
profile PF00917: MATH domain
Length = 420
Score = 27.5 bits (58), Expect = 2.4
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 230 GPPGETGESLIDGIYAKGEKGYPGYPGFN-GVPGRKGIRGDQGSDGYPGMGGDIGIQGTS 54
G PG G G G PG PGF G PG G G G PG GG G +G
Sbjct: 8 GGPGRGGRGF--GGRGGGPGFGPGGPGFGPGGPGF-GPGGPGFGPGGPGFGGR-GPRGPG 63
Query: 53 QQGPKGFKGFSGEK 12
GP+G +SG +
Sbjct: 64 -FGPRGPGPWSGPR 76
>At1g17640.1 68414.m02183 RNA recognition motif (RRM)-containing
protein similar to GB:L02953 from [Xenopus laevis]
(Nucleic Acids Res. 21, 999-1006 (1993)); contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 369
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 98 GYPGMGGDIGIQGTSQQGPKGFKGFSG 18
GY G GG G S P GF G+ G
Sbjct: 272 GYGGYGGYGAYAGNSMVNPAGFYGYGG 298
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 27.1 bits (57), Expect = 3.1
Identities = 30/92 (32%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Frame = -3
Query: 284 GQKGDMGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQG 105
G G G G G G G G G G GY G G G G G G G
Sbjct: 170 GHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGG--GGGGGSGGGGAYGGGG 227
Query: 104 SDG--YPGMGGDIGIQGTSQQGPKGFKGFSGE 15
+ G Y GG+ G G G G G GE
Sbjct: 228 AHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGE 259
>At5g41520.1 68418.m05044 40S ribosomal protein S10 (RPS10B)
contains similarity to 40S ribosomal protein S10
Length = 180
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQG---SDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
GE+ + G+ G P G GD+ +D PG G G G Q +G GF G
Sbjct: 118 GERRFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAG--GARQGFGRGAGGFGG 172
>At2g27300.1 68415.m03281 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 335
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 195 WHLC*RRKRISRIPWLQWCTREKRYSRGSGFRWVPRYGR*YW 70
W L K S W +C R ++Y GS R + G YW
Sbjct: 57 WDLPEESKLKSENEWFYFCARGRKYPHGSQSRRATQLG--YW 96
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 26.6 bits (56), Expect = 4.1
Identities = 29/84 (34%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEK--GYPGYPGFNGVPGRKGIRGDQGSDGYPG- 87
G G GE G G G G Y +GE GY G G G +G G GY G
Sbjct: 264 GYGGYGGEFGGYGGGGYGGGVGPY-RGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGG 322
Query: 86 ----MGGDIGIQGTSQQGPKGFKG 27
GG G G GP G G
Sbjct: 323 PGDMYGGSYGEPGGGYGGPSGSYG 346
Score = 26.2 bits (55), Expect = 5.5
Identities = 23/61 (37%), Positives = 25/61 (40%)
Frame = -3
Query: 197 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSG 18
DG Y G G GY G G G G S GY G GG+ G G G G + G
Sbjct: 234 DG-YGGGHGG--GYGGPGGPYKSGGGYGGGRSGGYGGYGGEFGGYGGGGYG-GGVGPYRG 289
Query: 17 E 15
E
Sbjct: 290 E 290
>At3g51810.1 68416.m05682 Em-like protein GEA1 (EM1) identical to
SP|Q07187 Em-like protein GEA1 (EM1) {Arabidopsis
thaliana}; contains Pfam profile PF00477: Small
hydrophilic plant seed protein
Length = 152
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGG 78
G + K ++G G G K + G+ GY G G + + G +GY MG
Sbjct: 44 GGQTRKEQLGHEGYQEIGHKGGEARKEQLGHEGYQEM-GHKGGEARKEQLGHEGYQEMGH 102
Query: 77 DIGIQGTSQQGPKGFK 30
G Q G +G+K
Sbjct: 103 KGGEARKEQLGHEGYK 118
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 236 EIGPPGETGESLIDGIYAKGEKG 168
E+GPPG G ++GI A+G G
Sbjct: 268 EVGPPGVIGGEGLEGIGAEGNIG 290
>At3g24250.1 68416.m03044 glycine-rich protein
Length = 137
Score = 26.6 bits (56), Expect = 4.1
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Frame = -3
Query: 191 IYAKGEKGYPGYPGFNGVPGR-KGIRGDQ-----------GSDGYPGMGGDIGIQGTSQQ 48
IY G G G GF G+PG G G G+ G G+GG +G G
Sbjct: 63 IYGGGIGGVAGVGGFMGMPGGGSGGSGMTFPLPSGTPLLGGAGGLGGLGGAMGFPGGLGG 122
Query: 47 GPKG 36
GP G
Sbjct: 123 GPSG 126
>At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 404
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = -3
Query: 275 GDMGLTGEEGDKGEIGPPGETGESLIDGI-YAKGEKGYPGYPGFNGVPGRKGIRGDQGSD 99
G G G G G G G E +D Y + + GYP + G G
Sbjct: 198 GGRGSGGAGGFPGYGGSGGSGYEGRVDSNRYMQPQNTGSGYPPYGGSGYGTGYGYGSNGV 257
Query: 98 GYPGMGG 78
GY G GG
Sbjct: 258 GYGGFGG 264
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = -1
Query: 172 KDIQDTLASMVYPGEKVFEGIRVQMGTQVWEVILEYRV----HHNKDQRASKDLVEKKKK 5
KD+ ++ + E ++E ++ QMG++++E + + RV N+ +R ++L K+ +
Sbjct: 1020 KDLDESSFEISLFAESLYEMLQYQMGSRIFEFLKKLRVKIVRQRNQRKRHQEELSVKQNE 1079
>At1g54070.1 68414.m06161 dormancy/auxin associated protein-related
Length = 123
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 133 PGTPLKPGYPGYPFSP 180
PGTPL PG P Y P
Sbjct: 78 PGTPLTPGTPCYALGP 93
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 257 GEEGDKGEIGPPGETGES 204
G + D+GE GPPG + ES
Sbjct: 389 GMDTDEGEEGPPGSSNES 406
>At1g44085.1 68414.m05090 glycine-rich protein similar to
glycine-rich protein GI:18147 from [Chenopodium rubrum]
Length = 90
Score = 26.2 bits (55), Expect = 5.5
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = -3
Query: 269 MGLTGEEGDKGEIGPPGETGESLIDGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYP 90
+G G D G IG G + Y Y G NG G G QG+ G
Sbjct: 14 VGYQGNPADSGGIGNVNSGGYQVNQNSYKNSGGYYQGNQATNGNSG--GYSPYQGTQGL- 70
Query: 89 GMGG 78
G+GG
Sbjct: 71 GVGG 74
>At5g41250.1 68418.m05013 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 561
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = -1
Query: 259 LAKKEIREKLAHLEKLENH*LMAFMLKEKKDIQDTLASMVYPG 131
+++++++EK ++ ++ L A LKEKKD++ + + PG
Sbjct: 490 ISEQDVKEKRVNVVEI----LKAKTLKEKKDMKSYIVQQLLPG 528
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 121 IPFLPGTPLKPGYPGYPFSPL 183
+P LPG P P PG P +PL
Sbjct: 364 VPGLPGIPPVPLIPGIPPAPL 384
>At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2)
identical to Rab2-like protein (At-RAB2) GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 197 DGIYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDG 96
DG++ + Y G+ G+PG G R S G
Sbjct: 173 DGVFDVSNESYGIKVGYGGIPGPSGGRDGSTSQG 206
>At3g59590.1 68416.m06649 jacalin lectin family protein similar to
suppressor of nim1-1 [Arabidopsis thaliana] GI:22023774;
contains Pfam profile PF01419: Jacalin-like lectin
domain
Length = 454
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 77 HLPYLGTHLNPDPLEYLF 130
HL LG H +P PL Y F
Sbjct: 428 HLTALGVHFSPPPLYYSF 445
>At2g41060.1 68415.m05070 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 451
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = -3
Query: 164 PGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQG---TSQQGPKG 36
PG G G+P G + + YPG G G QG T Q G G
Sbjct: 391 PGAVG--GMPSGYGTQANISPGVYPGYGAQAGYQGGYQTQQPGQGG 434
>At5g63120.2 68418.m07924 ethylene-responsive DEAD box RNA helicase,
putative (RH30) strong similarity to ethylene-responsive
RNA helicase [Lycopersicon esculentum] GI:5669638;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 591
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -3
Query: 191 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
+ A GY YP F G + G GY G GD G G G +G S ++
Sbjct: 51 VMAGDNSGYNRYPSFQPPSGGFSVGRGGGRGGY-GQYGD--RNGGGNWGGGGGRGGSSKR 107
Query: 11 E 9
E
Sbjct: 108 E 108
>At5g63120.1 68418.m07925 ethylene-responsive DEAD box RNA helicase,
putative (RH30) strong similarity to ethylene-responsive
RNA helicase [Lycopersicon esculentum] GI:5669638;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 484
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -3
Query: 191 IYAKGEKGYPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKGFKGFSGEK 12
+ A GY YP F G + G GY G GD G G G +G S ++
Sbjct: 51 VMAGDNSGYNRYPSFQPPSGGFSVGRGGGRGGY-GQYGD--RNGGGNWGGGGGRGGSSKR 107
Query: 11 E 9
E
Sbjct: 108 E 108
>At4g36440.1 68417.m05176 expressed protein
Length = 394
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 136 PGEKVFEGIRVQMGTQVWEVI 74
PG +VF+G V + + WE+I
Sbjct: 153 PGPRVFKGFTVGLHPRSWEII 173
>At4g29030.1 68417.m04151 glycine-rich protein glycine-rich protein
- Onobrychis viciifolia,PID:g2565429
Length = 115
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 176 EKGYPGYPG-FNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQG 45
+K Y GY G ++GV G G+ G G GG++G G G
Sbjct: 32 QKNYLGYGGGYSGV-GDNGLPFGGVGGGVSGPGGNLGYGGFGGAG 75
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 121 IPFLPGTPLKPGYPGYPFSP 180
+P P TP PG P P SP
Sbjct: 533 VPSPPSTPTSPGSPPSPSSP 552
>At4g17980.1 68417.m02676 no apical meristem (NAM) family protein
NAM (GI:6066595) [Petunia x hybrida]
Length = 262
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 159 IPWLQWCTREKRYSRGSGFRWVPRYGR*YW 70
+ W +C R+K+Y+ GS + G YW
Sbjct: 62 LEWFFFCPRDKKYANGSRTNRATKAG--YW 89
>At3g42560.1 68416.m04418 hypothetical protein
Length = 98
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 138 TREKRYSRGSGFRWVPRYGR 79
TR K+Y +G+G WV YGR
Sbjct: 67 TRPKKYEKGNGSFWV--YGR 84
>At2g05380.1 68415.m00566 glycine-rich protein (GRP3S) identical to
cDNA glycine-rich protein 3 short isoform (GRP3S)
GI:4206766
Length = 116
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 179 GEKGYPGYPGFNGVPGRKGIRGDQGSDG-YPGMGGDIGIQGTSQQGPKGFKGFSG 18
G+ G Y G G G G G QG G Y G GG G G+ + +KG+ G
Sbjct: 45 GDNGGGRYQGGGGHGGHGG-GGYQGGGGRYQGGGGRQGGGGSYCRHGCCYKGYHG 98
>At1g79270.1 68414.m09241 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 528
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 167 YPGYPGFNGVPGRKGIRGDQGSDGYPGMGGDIGIQGTSQQGPKG 36
Y GY G+ PG G G+ +GY G G + +Q QG G
Sbjct: 65 YGGYYGYY-YPGLDGSVGEAKDNGYYGYGTE--VQYPVMQGENG 105
>At1g14020.1 68414.m01656 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'growth regulator protein -related' based on similarity
to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana
tabacum], which, due to scienitific fraud was retracted.
Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908.
PMID:10400497.
Length = 499
Score = 25.4 bits (53), Expect = 9.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Frame = -1
Query: 286 SVKKEIWV*LAKKEIREKLAHLEKLENH*LMAFMLKEKKDIQDTLASMVYPGE--KVFEG 113
SV +E + + KKE+ + A L++ +NH L + Y G KV EG
Sbjct: 349 SVLREAFPRIVKKEMLLESAELQQFQNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEG 408
Query: 112 IRVQMGTQVWEVILEYR-------VHHNK 47
R +G + ++L+ + +HHNK
Sbjct: 409 HRRYLGYKK-TILLDRKRLVELLDLHHNK 436
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,629,181
Number of Sequences: 28952
Number of extensions: 159341
Number of successful extensions: 604
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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