Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31236
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 260 3e-68
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 246 5e-64
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 168 9e-41
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 157 2e-37
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 132 5e-30
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 122 6e-27
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 115 1e-24
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 113 3e-24
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 113 3e-24
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 111 1e-23
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 109 6e-23
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 108 1e-22
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 107 2e-22
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 101 1e-20
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 95 2e-18
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 92 9e-18
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 92 9e-18
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 90 4e-17
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 85 1e-15
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 82 1e-14
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 82 1e-14
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 79 1e-13
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 75 1e-12
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 60 3e-08
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 58 2e-07
UniRef50_Q2YHP1 Cluster: Monodehydroascorbate reductase; n=1; Pl... 49 1e-04
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 49 1e-04
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 48 3e-04
UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis... 46 8e-04
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 46 0.001
UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellul... 42 0.013
UniRef50_Q6G2Y7 Cluster: 30S ribosomal protein S13; n=20; cellul... 41 0.022
UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellu... 40 0.051
UniRef50_UPI000045C242 Cluster: hypothetical protein Npun0200881... 38 0.27
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 37 0.36
UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1; Pseudendocl... 28 0.41
UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.84
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 36 1.1
UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=... 36 1.1
UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomona... 35 1.5
UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42; Bacter... 35 1.5
UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmi... 35 1.9
UniRef50_Q5CDI1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5; Eurotio... 35 1.9
UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7; Pezizom... 35 1.9
UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus o... 34 2.6
UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1; Oltmannsiel... 34 2.6
UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta hyd... 34 2.6
UniRef50_Q5CDC4 Cluster: LacOPZ-alpha peptide from pUC9; n=1; Cr... 34 2.6
UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 34 3.4
UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit... 34 3.4
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 33 4.5
UniRef50_Q6L8J7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probab... 33 4.5
UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of str... 33 5.9
UniRef50_Q2AKW7 Cluster: Ribosomal protein S13; n=1; Bacillus we... 33 7.8
UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatu... 33 7.8
UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component... 33 7.8
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 33 7.8
UniRef50_A5VKD3 Cluster: Integrase, catalytic region; n=1; Lacto... 33 7.8
UniRef50_A3JLH4 Cluster: Asp/Glu/Hydantoin racemase family prote... 33 7.8
UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma ... 33 7.8
UniRef50_Q4N9S1 Cluster: Hexokinase, putative; n=5; Piroplasmida... 33 7.8
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 260 bits (636), Expect = 3e-68
Identities = 118/135 (87%), Positives = 130/135 (96%)
Frame = +2
Query: 113 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 292
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 293 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 472
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 473 RGMRHYWGLRVRGQH 517
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 246 bits (601), Expect = 5e-64
Identities = 108/135 (80%), Positives = 128/135 (94%)
Frame = +2
Query: 113 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 292
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 293 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 472
E+EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 473 RGMRHYWGLRVRGQH 517
RG+RH+WGLRVRGQH
Sbjct: 121 RGLRHFWGLRVRGQH 135
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 168 bits (409), Expect = 9e-41
Identities = 80/134 (59%), Positives = 107/134 (79%)
Frame = +2
Query: 113 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 292
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 293 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 472
E++VE++ITIM NPRQY+IP QK + DG+ SQ+ ++ LD+KLRE+LERLKKIRAH
Sbjct: 61 EDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAH 114
Query: 473 RGMRHYWGLRVRGQ 514
RG+RH+WGL V Q
Sbjct: 115 RGLRHFWGLHVHCQ 128
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 157 bits (381), Expect = 2e-37
Identities = 73/137 (53%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Frame = +2
Query: 113 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 286
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 287 CTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 466
TE++ KI ++++P + IP W LNR D DGK Q+ S+ LD+K+REDLERLKKI+
Sbjct: 61 LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK 120
Query: 467 AHRGMRHYWGLRVRGQH 517
+HRG+RH+WGL+VRGQH
Sbjct: 121 SHRGLRHFWGLKVRGQH 137
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 132 bits (320), Expect = 5e-30
Identities = 60/134 (44%), Positives = 89/134 (66%)
Frame = +2
Query: 116 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 295
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 296 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 475
E + ++ ++ +P + IP W LNR D GK + + + S R DLERL+K R R
Sbjct: 63 AEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCER 122
Query: 476 GMRHYWGLRVRGQH 517
G+RH+ L+VRGQH
Sbjct: 123 GVRHHHNLKVRGQH 136
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 122 bits (295), Expect = 6e-27
Identities = 53/129 (41%), Positives = 92/129 (71%)
Frame = +2
Query: 128 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 307
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T +E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 308 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 487
I++I+ NP +++IP W LNR+ D G+ + +++L + +R ++ER+KK+R RG+RH
Sbjct: 68 LIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRH 127
Query: 488 YWGLRVRGQ 514
GL+VRGQ
Sbjct: 128 GLGLKVRGQ 136
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 115 bits (276), Expect = 1e-24
Identities = 57/129 (44%), Positives = 85/129 (65%)
Frame = +2
Query: 128 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 307
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E+E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 308 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 487
+I + +P IP+ ++N Q+DI+DG S L + LD+ LR +ER KK + R R
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRL 126
Query: 488 YWGLRVRGQ 514
GL+VRGQ
Sbjct: 127 DVGLKVRGQ 135
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 113 bits (273), Expect = 3e-24
Identities = 53/128 (41%), Positives = 81/128 (63%)
Frame = +2
Query: 131 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 310
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G EEEV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 311 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 490
+ T + +P W LNRQKD+ G+ L +++ RED+ LKK+RA+RG+RH
Sbjct: 78 LDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHE 136
Query: 491 WGLRVRGQ 514
GL+VRGQ
Sbjct: 137 RGLKVRGQ 144
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 113 bits (272), Expect = 3e-24
Identities = 51/127 (40%), Positives = 85/127 (66%)
Frame = +2
Query: 134 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 313
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TEEEV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 314 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 493
++++P ++ IP W NR+KD V G+ + S+L +ED+ RLK+IR +RG+RH
Sbjct: 65 EEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHEL 124
Query: 494 GLRVRGQ 514
GL RGQ
Sbjct: 125 GLPCRGQ 131
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 111 bits (268), Expect = 1e-23
Identities = 47/126 (37%), Positives = 89/126 (70%)
Frame = +2
Query: 137 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKII 316
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE EE++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLR 87
Query: 317 TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWG 496
+ ++Y +P+W LN +++ V GK L S++L+ +++ED+ +KKIR+++G+RH G
Sbjct: 88 EYVE-AKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKG 146
Query: 497 LRVRGQ 514
+VRGQ
Sbjct: 147 KKVRGQ 152
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 109 bits (262), Expect = 6e-23
Identities = 57/134 (42%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Frame = +2
Query: 113 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 286
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 287 CTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 466
T+EE KI ++ QY +D+ +GK ++T++ L++KLREDLER+KKI+
Sbjct: 61 LTDEEAHKITEVIKMVPQY---------IRDLKNGKNYEVTTNELETKLREDLERIKKIK 111
Query: 467 AHRG--MRHYWGLR 502
+ +RH+WGLR
Sbjct: 112 YSQWLCLRHHWGLR 125
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 108 bits (259), Expect = 1e-22
Identities = 50/128 (39%), Positives = 83/128 (64%)
Frame = +2
Query: 131 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 310
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G E+V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 311 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 490
+ ++ N + +P W LNR++DI G+ L +L ++ED+ +KKIR+++G+RH
Sbjct: 127 LRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHE 185
Query: 491 WGLRVRGQ 514
G +VRGQ
Sbjct: 186 RGQKVRGQ 193
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 107 bits (258), Expect = 2e-22
Identities = 47/127 (37%), Positives = 84/127 (66%)
Frame = +2
Query: 134 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 313
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++E+++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 314 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 493
+++ + ++P+W NR+KD G L +S+L +R D+ER KKI++ RG+RH
Sbjct: 66 ENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSL 125
Query: 494 GLRVRGQ 514
GL+VRGQ
Sbjct: 126 GLKVRGQ 132
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 101 bits (242), Expect = 1e-20
Identities = 44/127 (34%), Positives = 80/127 (62%)
Frame = +2
Query: 134 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 313
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG +E+V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 314 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 493
+++ +P + IP W NR+KD+ G L ++L ++ED+ +KKIR ++G+RH
Sbjct: 65 ESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHEL 124
Query: 494 GLRVRGQ 514
L RGQ
Sbjct: 125 RLPCRGQ 131
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 94.7 bits (225), Expect = 2e-18
Identities = 41/127 (32%), Positives = 78/127 (61%)
Frame = +2
Query: 134 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 313
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+E+V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 314 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 493
++ +P P WFLNR+KD+ G+ + +S+++ +R D+ER + + +G RH +
Sbjct: 110 EKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMF 169
Query: 494 GLRVRGQ 514
GL+VRGQ
Sbjct: 170 GLKVRGQ 176
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 92.3 bits (219), Expect = 9e-18
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +2
Query: 209 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 352
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 92.3 bits (219), Expect = 9e-18
Identities = 42/128 (32%), Positives = 77/128 (60%)
Frame = +2
Query: 131 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 310
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ ++ +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 311 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 490
++ + N +P+W N QKD G+ + T ++L R+D+ R+K I ++RG+RH
Sbjct: 78 VVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHK 136
Query: 491 WGLRVRGQ 514
G +VRGQ
Sbjct: 137 RGQKVRGQ 144
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/129 (33%), Positives = 73/129 (56%)
Frame = +2
Query: 131 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 310
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 311 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 490
++ I + P W +NR+ D + G + S+ LDS L+ED++RL I+ ++G+RH
Sbjct: 73 VVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHL 132
Query: 491 WGLRVRGQH 517
L+ RGQH
Sbjct: 133 SRLKTRGQH 141
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 368 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 517
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRVRGQH
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 128
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Frame = +2
Query: 134 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN----IVLKKADIDLDKRAGECTEEE 301
K I+RI N +I+G + A+ +KG+G+ S+ ++ K +ID G E +
Sbjct: 15 KAMSIVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQ 74
Query: 302 VEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGM 481
V ++ ++ +P +Y +P + LNR+ D+ GK L ++L +R+ + R +R RG
Sbjct: 75 VTQVEELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGY 134
Query: 482 RHYWGLRVRGQH 517
RH +G +VRGQH
Sbjct: 135 RHQYGQKVRGQH 146
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/123 (33%), Positives = 72/123 (58%)
Frame = +2
Query: 146 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 325
I+R+ +T+++G ++V +A+ I+G+G + + K ID G EE++ K+ +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 326 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 505
N + P WFLNR+KD G+ L S L + D++ +KK+++ +G+RH GL+V
Sbjct: 68 RNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKV 126
Query: 506 RGQ 514
RGQ
Sbjct: 127 RGQ 129
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Frame = +2
Query: 146 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 325
I+ I + ++DG + + + + GV +++ V ID ++ G ++EE+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 326 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 505
NP +Y IP W NR++D GK L ++ + D++R +I + RG RH GL V
Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132
Query: 506 RGQ 514
RGQ
Sbjct: 133 RGQ 135
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/135 (31%), Positives = 70/135 (51%)
Frame = -3
Query: 517 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 338
VLTT T APV+S SV +NLL+ L++ + +++ G L I I+L + EP+ L
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSEL 103
Query: 337 PRIRHDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIH 158
R+ HD F L L +I++ F + VG A+ D H+L ++V +
Sbjct: 104 SRVGHDHHQRFQLRGGELPGALPEIDLSLFAHQVGEAAADPLDLGQGVHHLLTTVNVGVE 163
Query: 157 DTKNMLKFVWNDQRH 113
D ++L+ + +D+ H
Sbjct: 164 DADDVLEIITDDEAH 178
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 60.5 bits (140), Expect = 3e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 323 MSNPRQYKIPDWFLNRQKDIVDGKYSQL 406
M NPRQYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 58.0 bits (134), Expect = 2e-07
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 331
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+EE+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI------ 56
Query: 332 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 511
+Y I D F V+G+ L S++ ++ RL +I +RG+RH GL VRG
Sbjct: 57 -TKY-IQDHFK------VEGE--------LRSEVERNIRRLIEIGCYRGIRHKLGLPVRG 100
Query: 512 Q 514
Q
Sbjct: 101 Q 101
>UniRef50_Q2YHP1 Cluster: Monodehydroascorbate reductase; n=1;
Plantago major|Rep: Monodehydroascorbate reductase -
Plantago major (Common plantain)
Length = 151
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +3
Query: 18 PRGGGRSITSGSPGLQEFGTRVWE 89
PRGGGRS TSGSPGLQEFGTRV E
Sbjct: 5 PRGGGRSRTSGSPGLQEFGTRVGE 28
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 103 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCWP 225
L+ +V G R IST++S ++E RW+T+ +VC D +QR WP
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHVCSDLHQRYWP 45
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/122 (25%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMS- 328
R++N I ++++ A+ +I G+G+ + +++K + EE+ K I++
Sbjct: 3 RVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKT--------AKLQEEKFGKKFPILTE 54
Query: 329 NPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVR 508
N + +I + L +D+ + T +L +++ +++RL +I+ +RG+RH GL VR
Sbjct: 55 NTKVKEINEEVLQVIRDVAK---TYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVR 111
Query: 509 GQ 514
GQ
Sbjct: 112 GQ 113
>UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S13 -
Victivallis vadensis ATCC BAA-548
Length = 131
Score = 46.0 bits (104), Expect = 8e-04
Identities = 35/121 (28%), Positives = 59/121 (48%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 331
RI+ +I G ++V F++ + GVG + +++K ID D +A + T +++ I I+
Sbjct: 3 RIIGVDIPGNKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL-- 60
Query: 332 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 511
Q D+ L +L L D+ RL++I +RG+RH L VRG
Sbjct: 61 -------------QDDL-------LVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRG 100
Query: 512 Q 514
Q
Sbjct: 101 Q 101
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 517 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGG---QLAVFTINNILLPI*EPVWY 347
VL + + V++ +++A+ E LQ+ T + G G + VF I++ I P W
Sbjct: 29 VLPANLQVVVVADTALAASFTETLQVRT---VGRGYGIDQNVHVFARFKIIVTIKHPGWN 85
Query: 346 LILPRIRHDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDV 167
+ + D L C S V +NVGF E N+G N +S A+DV
Sbjct: 86 AVGEGVLKDLHESILLGRCELTSAFVNVNVGFLEGNIGKAAPNPLNSDKGTLKYDLALDV 145
Query: 166 RIHDTKNMLKFV-WNDQRH 113
+ T+ + V ND+ H
Sbjct: 146 CVKHTQEVPVVVGLNDRCH 164
>UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellular
organisms|Rep: 30S ribosomal protein S13 - Aquifex
aeolicus
Length = 126
Score = 41.9 bits (94), Expect = 0.013
Identities = 32/121 (26%), Positives = 56/121 (46%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 331
RI ++ +++ A+T I G+G + + +K I KR GE T +E
Sbjct: 3 RIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDE---------- 52
Query: 332 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 511
LN + +D Y +L +++ ++++LK + +RG+RH GL VRG
Sbjct: 53 ----------LNTLRKFIDENYK--VEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRG 100
Query: 512 Q 514
Q
Sbjct: 101 Q 101
>UniRef50_Q6G2Y7 Cluster: 30S ribosomal protein S13; n=20; cellular
organisms|Rep: 30S ribosomal protein S13 - Bartonella
henselae (Rochalimaea henselae)
Length = 122
Score = 41.1 bits (92), Expect = 0.022
Identities = 31/121 (25%), Positives = 57/121 (47%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 331
RI NI ++V+ A+ I G+G +++ + KK I + +R E ++ EV +I
Sbjct: 3 RIAGVNIPTNKRVIIALQYIHGIGPKFAQEITKKVGIPIGRRVHELSDAEVLQI------ 56
Query: 332 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 511
++ +D Y +L ++ +++RL + +RG+RH L VRG
Sbjct: 57 --------------REAIDQGYQ--VEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRG 100
Query: 512 Q 514
Q
Sbjct: 101 Q 101
>UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellular
organisms|Rep: 30S ribosomal protein S13 - Zymomonas
mobilis
Length = 122
Score = 39.9 bits (89), Expect = 0.051
Identities = 31/121 (25%), Positives = 57/121 (47%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 331
RI NI ++V A+T I G+G + ++ K I ++R + ++ EV +I
Sbjct: 3 RIAGVNIPTNKRVEIALTYIHGIGPTTAKKIVTKLGIAPERRVQDLSDNEVLQI------ 56
Query: 332 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 511
++ +D Y+ +L ++ +++RL + +RG+RH GL VRG
Sbjct: 57 --------------REAIDADYT--VEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRG 100
Query: 512 Q 514
Q
Sbjct: 101 Q 101
>UniRef50_UPI000045C242 Cluster: hypothetical protein Npun02008815;
n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
protein Npun02008815 - Nostoc punctiforme PCC 73102
Length = 69
Score = 37.5 bits (83), Expect = 0.27
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -2
Query: 71 EFLQPGGATSYRAAATAWESPV 6
EFLQPGG+TS RAAATA E P+
Sbjct: 38 EFLQPGGSTSSRAAATAVELPI 59
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 230 YSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDG 391
Y N + D + DK + E ++E E++IT++ + KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S13 -
Pseudendoclonium akinetum (Green alga)
Length = 119
Score = 28.3 bits (60), Expect(2) = 0.41
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 371 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
Q +++ +L +SN + E ++ L KI +RG RH L RGQ
Sbjct: 51 QLELLTKSCRRLIASNKKREKVEAIKSLIKISCYRGTRHMNALPCRGQ 98
Score = 27.9 bits (59), Expect(2) = 0.41
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 155 IMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 307
++ +N+ + FA+ AI GVG++ + V I+ R E ++E
Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLE 53
>UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 82
Score = 35.9 bits (79), Expect = 0.84
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +2
Query: 413 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 517
+ L +L++++ER++ + ++RG RH GL VRGQ+
Sbjct: 5 TELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQN 39
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 170 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEEEVEK 310
+D K KV A G+GR +S +LK K I DLD AGE T EE+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S13 - Prototheca wickerhamii
Length = 119
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 407 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
T S++ R++++RL I ++RG RH GL VRGQ
Sbjct: 66 TGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQ 101
>UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomonas
americana|Rep: Ribosomal protein S13 - Reclinomonas
americana
Length = 122
Score = 35.1 bits (77), Expect = 1.5
Identities = 28/123 (22%), Positives = 56/123 (45%)
Frame = +2
Query: 146 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 325
++ + NI+ +K+ FA+ AI G+G + + + ++ + + E ++ K+
Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLC--- 57
Query: 326 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 505
+ I + FL S L +++RL I+++RG+RH +GL V
Sbjct: 58 -----HYIEENFL--------------IESELRKNQTYNIKRLLDIKSYRGLRHAYGLPV 98
Query: 506 RGQ 514
GQ
Sbjct: 99 HGQ 101
>UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42;
Bacteria|Rep: 30S ribosomal protein S13 -
Corynebacterium efficiens
Length = 122
Score = 35.1 bits (77), Expect = 1.5
Identities = 25/121 (20%), Positives = 57/121 (47%)
Frame = +2
Query: 152 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSN 331
R+ ++ +++ A+T I G+G + +L++ + D R T+E++ +
Sbjct: 3 RLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASL------ 56
Query: 332 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 511
+D+++ + +L +++ D+ R +I +++G+RH GL VRG
Sbjct: 57 --------------RDVIEATWK--VEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRG 100
Query: 512 Q 514
Q
Sbjct: 101 Q 101
>UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S13 - Nephroselmis
olivacea
Length = 125
Score = 34.7 bits (76), Expect = 1.9
Identities = 29/120 (24%), Positives = 52/120 (43%)
Frame = +2
Query: 155 IMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNP 334
I NT + K+KV A+ I G+G + + + + + + + +VE++ ++S
Sbjct: 4 IANTYLSQKQKVSIALQQIYGIGSHLAYQICDQLGLSPNFKIEQLNRNQVEQLSLLVSQ- 62
Query: 335 RQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
S +T S L +++D+ RL I +RG R+ L VRGQ
Sbjct: 63 ---------------------SYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQ 101
>UniRef50_Q5CDI1 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium hominis|Rep: Putative uncharacterized
protein - Cryptosporidium hominis
Length = 72
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2
Query: 77 RAEFLQPGGATSYRAAATAWE 15
+ EFLQPGG+TS RAAATA E
Sbjct: 42 KIEFLQPGGSTSSRAAATAVE 62
>UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5;
Eurotiomycetidae|Rep: 40S ribosomal protein S13 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 169
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 413 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 103 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 136
>UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7;
Pezizomycotina|Rep: 40S ribosomal protein S13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 118
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 413 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 66 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 99
>UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus oeni
ATCC BAA-1163|Rep: Rhamnosyltransferase - Oenococcus
oeni ATCC BAA-1163
Length = 311
Score = 34.3 bits (75), Expect = 2.6
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 140 QHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIIT 319
QH ++ T + K +F + I + Y N + KK +L K GEC +E I
Sbjct: 215 QHSSNVVGTTGNNLFKKIFKIREI--FNKFYKNGLFKKQANELLKNYGECLSKEKRNAIN 272
Query: 320 I-MSNPRQYKIPDWFLNRQK 376
I +S+ RQ K W L + K
Sbjct: 273 IFLSSNRQLKEVFWILKKIK 292
>UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S13 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 117
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 428 KLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
K RE+++RL +I ++RG RH GL RGQ
Sbjct: 72 KKRENIQRLVRISSYRGFRHTAGLPCRGQ 100
>UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta
hydrolase superfamily; n=2; Cryptosporidium|Rep:
COG1752: esterase of the alpha-beta hydrolase
superfamily - Cryptosporidium hominis
Length = 794
Score = 34.3 bits (75), Expect = 2.6
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 131 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 310
+ F +L+ +N +I K + + + SN K DK+ + E
Sbjct: 645 NSFVVVLKSLNDDIQRLNKTLITIDSFLKSSNNISNKATKLLKYIEDKQKKGIFSAKFED 704
Query: 311 IITIMSNPRQYK-----IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKI 463
+IT++S Y I +N ++ IVD K+SQL + + LRE E K+
Sbjct: 705 VITLLSLYEDYVEKLQGIRIKEINSRRIIVDSKHSQLILARIIIALREQNEHFPKL 760
>UniRef50_Q5CDC4 Cluster: LacOPZ-alpha peptide from pUC9; n=1;
Cryptosporidium hominis|Rep: LacOPZ-alpha peptide from
pUC9 - Cryptosporidium hominis
Length = 128
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -2
Query: 71 EFLQPGGATSYRAAATAWE 15
EFLQPGG+TS RAAATA E
Sbjct: 67 EFLQPGGSTSSRAAATAVE 85
>UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 130
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 413 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
++L ++ +D++RLK+ +RG RH GL VRGQ
Sbjct: 65 NDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQ 98
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 53 PRAAGIRHEGLGTLVRNLTKMSLVIPDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGR 226
P + + T + ++K+ P K Q +L I +T N + M +TA+KG+GR
Sbjct: 63 PTLKSLSKADIDTFISYISKVRNY-PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGR 121
Query: 227 RYSNIVLKKAD 259
+ +N++L++ +
Sbjct: 122 KSANVILRETE 132
>UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit
S37; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S37 - Schizosaccharomyces
pombe (Fission yeast)
Length = 151
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 440 DLERLKKIRAHRGMRHYWGLRVRGQH 517
D+ RL IR +RGMRH GL V GQ+
Sbjct: 76 DISRLVNIRCYRGMRHVNGLPVNGQN 101
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 289 AFASTLVKINVGFFENNVG-VPPANTFDSRHRK-HNLAFAIDVRIHDTKNML 140
AFA T V+ VGF++ VG + +D +K H+ AF DV + DTK L
Sbjct: 23 AFAETPVEPTVGFYKYTVGDIEVTAIYDGIWKKPHDPAFIKDVSVEDTKAAL 74
>UniRef50_Q6L8J7 Cluster: Putative uncharacterized protein; n=1;
Thermosynechococcus vulcanus|Rep: Putative
uncharacterized protein - Synechococcus vulcanus
(Thermosynechococcus vulcanus)
Length = 89
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 71 EFLQPGGATSYRAAATAWES 12
EFLQPGG+TS RAAA W +
Sbjct: 68 EFLQPGGSTSSRAAAFKWRA 87
>UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Parabacteroides
distasonis ATCC 8503|Rep: Putative outer membrane
protein, probably involved in nutrient binding -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 531
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 227 RYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDW 358
RYS ++ KA+ + K G+ T+E V+ I ++ R +K DW
Sbjct: 410 RYSEVIYNKAEALMRKNGGKATQEVVDMINSV--RQRSFKAEDW 451
>UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome B
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 156
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 413 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
S+L K+ D+ER +K ++ G RH G+ V+GQ
Sbjct: 70 SDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQ 103
>UniRef50_Q2AKW7 Cluster: Ribosomal protein S13; n=1; Bacillus
weihenstephanensis KBAB4|Rep: Ribosomal protein S13 -
Bacillus weihenstephanensis KBAB4
Length = 75
Score = 32.7 bits (71), Expect = 7.8
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 302 VEKIITIMSNPRQYKIPDWF---LNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 472
++K++ + PR+++ D L R +DI+D +L ++ +++RL +I ++
Sbjct: 6 LKKLLQKLVFPRKHESRDLSEDELGRIRDIID---RIKVEGDLRREVSLNIKRLMEIGSY 62
Query: 473 RGMRHYWGLRVRG 511
RG+RH GL VRG
Sbjct: 63 RGLRHRRGLPVRG 75
>UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatus
Ellin6076|Rep: Trigger factor - Solibacter usitatus
(strain Ellin6076)
Length = 422
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 272 KRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQ-KDIVDGKYSQLTSSNLD-SKLREDL 445
+R E +E KI+ + + ++ +P+ F+ RQ ++ V+ + +D SKL+ D
Sbjct: 272 QRQYEAQQEAKNKIVDKLVDAHEFPVPEVFVERQIRNRVEQSLRAMAEQGVDPSKLKLDW 331
Query: 446 ERLKKIRAHRGMR 484
E++K+ + + R
Sbjct: 332 EKVKEAQREKATR 344
>UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component
NapD; n=1; Sulfurovum sp. NBC37-1|Rep: Periplasmic
nitrate reductase component NapD - Sulfurovum sp.
(strain NBC37-1)
Length = 119
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 281 GECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSN-LDSKLREDLERLK 457
G+ EEE+EK++ I P D + Q+D +D + +L N + L +D ++
Sbjct: 46 GKGVEEEIEKLVKIQRLPNVI-AADMMMTYQEDELDAEVKRLEEENPVPDVLNDDDIDVR 104
Query: 458 KIRAHRGMRH 487
+ H +RH
Sbjct: 105 DVEYHGDLRH 114
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 32.7 bits (71), Expect = 7.8
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 218 VGRRYSNIVLKKADIDLDKRAGECTEEEVE----KIITIMSNPRQYKIPDWFLNRQKDIV 385
V +RY+ I+LKK DID K E +++ K+ ++ P Q + LN+ +D +
Sbjct: 148 VTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAIPNQLEDKQIELNKAQDEI 207
Query: 386 DGKYSQLTSSNLD 424
K + L +NLD
Sbjct: 208 KAKENSL-KNNLD 219
>UniRef50_A5VKD3 Cluster: Integrase, catalytic region; n=1;
Lactobacillus reuteri F275|Rep: Integrase, catalytic
region - Lactobacillus reuteri F275
Length = 403
Score = 32.7 bits (71), Expect = 7.8
Identities = 27/88 (30%), Positives = 35/88 (39%)
Frame = -3
Query: 310 FFNLFFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIHDTKNMLKFV 131
+ N F TL VG FE GVP FD N+ A+D H + K V
Sbjct: 154 YLNFVFDRKQDTLFSSLVGAFEFMNGVPKEIVFD------NMKTAVD---HARSSFTKVV 204
Query: 130 WNDQRHFG*VSNQRSQTLVPNSCSPGEP 47
WN++ + R+ P SC P P
Sbjct: 205 WNEKL----LEFARTAGFTPKSCKPFRP 228
>UniRef50_A3JLH4 Cluster: Asp/Glu/Hydantoin racemase family protein;
n=2; Alphaproteobacteria|Rep: Asp/Glu/Hydantoin racemase
family protein - Rhodobacterales bacterium HTCC2150
Length = 266
Score = 32.7 bits (71), Expect = 7.8
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +2
Query: 50 LPRAAGIRHE--GLGTLVRNLTKMSLVI-PDKFQHILRIMNTNIDGKRKVMFAMTAIKGV 220
LP AAG+ E GL L T S +I D+ IL + N+ + AMTAIK +
Sbjct: 77 LPVAAGLIPEYLGLSALGYGCTSGSTIIGEDRVAAILDEKHPNVPSSNPMTAAMTAIKTM 136
Query: 221 GRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMS 328
G + +V D+ + E EE KI T+ S
Sbjct: 137 GAQRIGLVTPYTP-DVTRAMQERFEEVGIKITTVGS 171
>UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma
viride|Rep: Ribosomal protein S13 - Mesostigma viride
Length = 116
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 419 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 514
L +++ + ERL KI ++RG RH+ GL RGQ
Sbjct: 72 LINRIHLNKERLIKISSYRGFRHHRGLPARGQ 103
>UniRef50_Q4N9S1 Cluster: Hexokinase, putative; n=5;
Piroplasmida|Rep: Hexokinase, putative - Theileria parva
Length = 506
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 319 SDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIHDTKNML 140
++N +N + STL++ V + + VP + D R + + V ++D K++
Sbjct: 13 TNNKYNHIKMSSVSTLIREAVEIYRGDSAVPTSLASDPEVRLQQIVDQLTVSLNDLKDVS 72
Query: 139 KFVWNDQRHFG*VSNQRSQTL-VPNSCS 59
+++ H G +++R + L +PN CS
Sbjct: 73 HNFYSELMH-GLKAHRRHRNLWLPNECS 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,032,617
Number of Sequences: 1657284
Number of extensions: 13166638
Number of successful extensions: 38006
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 36826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37989
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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