Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31236
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.7  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 308 FQPLLLCIRQHACQDQCRLF 249
           F  +L  + +HAC + CR+F
Sbjct: 266 FNTVLELMPKHACSEYCRVF 285


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 118  AGHSRQISTYSSYHEYEHRWQTQGY-VCDDGYQRCWP 225
            AG   + + + +Y+E  H  +TQG+ V  D  +R  P
Sbjct: 1667 AGEYTRAAGFLAYYEICHNIKTQGWTVVQDPNRRMGP 1703



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +1

Query: 100  KLNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCW 222
            +L  N A  +R I     + E   +W   G   D  Y +CW
Sbjct: 1488 RLVNNPAARARFIKHVLQFLE---KWNFDGLDLDWEYPKCW 1525


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 130 RQISTYSSYHEYEHRWQTQGYVCDDG 207
           RQ+  +      +H+ QT G   DDG
Sbjct: 46  RQVKVWFQNRRMKHKRQTLGKQGDDG 71


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 130 RQISTYSSYHEYEHRWQTQGYVCDDG 207
           RQ+  +      +H+ QT G   DDG
Sbjct: 177 RQVKVWFQNRRMKHKRQTLGKQGDDG 202


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +1

Query: 58  GCRNSARGFGNVG*KLNQNVAGHSRQISTYSSYHEYEHRW 177
           GC +  RG   +   + +     S Q   Y  Y + E RW
Sbjct: 229 GCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRW 268


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +1

Query: 58  GCRNSARGFGNVG*KLNQNVAGHSRQISTYSSYHEYEHRW 177
           GC +  RG   +   + +     S Q   Y  Y + E RW
Sbjct: 543 GCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRW 582


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +1

Query: 58  GCRNSARGFGNVG*KLNQNVAGHSRQISTYSSYHEYEHRW 177
           GC +  RG   +   + +     S Q   Y  Y + E RW
Sbjct: 776 GCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRW 815


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +1

Query: 58  GCRNSARGFGNVG*KLNQNVAGHSRQISTYSSYHEYEHRW 177
           GC +  RG   +   + +     S Q   Y  Y + E RW
Sbjct: 776 GCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRW 815


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 395 IYHQQYPFAYLGTSLVSYT 339
           + HQ+  F+ LG  +V YT
Sbjct: 347 LLHQKVQFSVLGFFVVDYT 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,813
Number of Sequences: 336
Number of extensions: 3461
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)