Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31235
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 170 7e-43
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 100 9e-22
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 100 9e-22
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 29 2.4
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.4
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 5.5
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 28 7.3
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 28 7.3
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 170 bits (414), Expect = 7e-43
Identities = 90/211 (42%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Frame = +3
Query: 45 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 224
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 225 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 404
S DE G AAI TV +DD G QHRE+Q YES FL YF IRY+ GG+ SG+
Sbjct: 66 NASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYR 124
Query: 405 HVTIN-EGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 581
HV + + LF KGKRNVR +V+ SLN GD FILD+ ++V++ ++ +E
Sbjct: 125 HVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRLE 184
Query: 582 RMKALTVANQIKDQDHNGRADIEVGDSEAHD 674
R+K + A I D + G + + D D
Sbjct: 185 RIKGMARAKNIADHERMGIPKVHILDDVEWD 215
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 495 ESLNNGDCFILD-VDHQIFVFVGEKAKGVERMKALTVANQIKDQDH 629
E L+ D FILD ++ IFV++G + ER KAL Q H
Sbjct: 277 EQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHH 322
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 100 bits (240), Expect = 9e-22
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = +3
Query: 54 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 230
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 231 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 407
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 408 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 581
T RL++ + G V ++ V + ESL+ CF+LD I+++ G K++
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITV 679
Query: 582 RMKALTVANQIKDQDHNGRADIE 650
KA A ++ +D G+++IE
Sbjct: 680 SNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 75 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 167
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 100 bits (240), Expect = 9e-22
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Frame = +3
Query: 54 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 230
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 231 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 407
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 408 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 581
T RL++ + G V ++ V + ESL+ CF+LD I+++ G K++
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITV 679
Query: 582 RMKALTVANQIKDQDHNGRADIE 650
KA A ++ +D G+++IE
Sbjct: 680 SNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 75 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 167
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 279 DEQFQGSAVQHREVQYY---ESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQI 449
DE+ + AV+ E + E E LE AI ++G S ++ + L Q+
Sbjct: 165 DERIRLDAVKIDEEAFAVVEEEPEKLETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQV 224
Query: 450 KGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKALTVANQI 614
+G +NV V+ V P S++ CF++ + + G + +E+ KA + +I
Sbjct: 225 RGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKASQLCIEI 279
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 568 AFSPTKTKI*WSTSKMKQSPLFKDSNVGFTCLTRTFLLPLIWKS 437
+F P+ +K+ WS K+K S L K ++ T L T L L KS
Sbjct: 820 SFMPSSSKLSWSNLKVKASRLSKSKSIDTTHLDVTRLHALSKKS 863
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 109 SPFRRLSSVSSTPGTPTLY*TP 174
SP +R SSV + PGTP +Y P
Sbjct: 105 SPRKRFSSVETNPGTPRIYLPP 126
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.5
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Frame = +1
Query: 13 ARDLKCLKYTKHSRMPAGSRVSKYGGLRTSNRSPFRRLSSVSSTPG--TPTLY*TPQAIR 186
A ++ K T HS + R + R+ ++SP RR S S G TP + ++
Sbjct: 279 AAEISRRKSTSHSTSLSKRRYLRSRS-RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSES 337
Query: 187 TV*H--GTSISGSARGPARTKPARRPSSR*TWTTNNSKDQRYSTERSNITSPRSS*NISH 360
T G +R P R +P RR SR + + + ++ ++ RS S S +
Sbjct: 338 TSRRRSGRHSRSRSRSPPRKRPVRRSRSR---SRSRTPNRNWTRARSRTRSQAKSSSTLT 394
Query: 361 QPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSALSR*NRHLS 498
P + ++++ R+++E+++ + K+ S+ +H S
Sbjct: 395 WPLS---PSRSRSNSNERNLKEKKDRKKKKSEKKRKHHSKSRKHRS 437
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 275 GRRTIPRISGTAPRGPILRVQG--VPRIFLTSHPLFKRRTRLRLQP 406
G +P S AP GPI+ G VP + T++ + +L+ QP
Sbjct: 167 GHHQVPAQSPIAPAGPIVNTPGSLVPPLHFTANIMNPTTVQLKWQP 212
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 131 RSLLLRGLLHCTEHHRR 181
+SLLLRGL+ +HHRR
Sbjct: 579 KSLLLRGLMAARKHHRR 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,149
Number of Sequences: 27780
Number of extensions: 348787
Number of successful extensions: 1005
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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