Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31232
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         240   3e-65
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         240   3e-65
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         240   3e-65
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          234   2e-63
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   7.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   7.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.2  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  240 bits (588), Expect = 3e-65
 Identities = 110/116 (94%), Positives = 114/116 (98%)
 Frame = +1

Query: 16  ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
           ALFQPSFLGME+CGIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320

Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
           LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  240 bits (588), Expect = 3e-65
 Identities = 110/116 (94%), Positives = 114/116 (98%)
 Frame = +1

Query: 16  ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
           ALFQPSFLGME+CGIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320

Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
           LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  240 bits (588), Expect = 3e-65
 Identities = 110/116 (94%), Positives = 114/116 (98%)
 Frame = +1

Query: 16  ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
           ALFQPSFLGME+CGIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320

Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
           LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  234 bits (572), Expect = 2e-63
 Identities = 108/116 (93%), Positives = 112/116 (96%)
 Frame = +1

Query: 16  ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
           ALFQPSFLGMES GIHETVYNSIM+CDVDIRKDLYAN+V+SGGTTMYPGIADRMQKEIT+
Sbjct: 261 ALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITS 320

Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
           LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EYDE GPGIVHRKCF
Sbjct: 321 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 433 DGCVQNSDEHNTTQHRGHAAAL 368
           +GCV++ +EH      G+ A+L
Sbjct: 33  EGCVRSREEHARAGQEGNVASL 54


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +3

Query: 93  RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREE 245
           R R P    +Q +  +   +VP   RQ  +   RPR    Q Q  +  + E
Sbjct: 246 RHRQP-QQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGE 295


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +3

Query: 63  RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP 158
           R+ + LHH+  ++      + H H   +H+ P
Sbjct: 139 RNGIVLHHQAHQQQQQQQQQLHHHHHHHHNAP 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,271
Number of Sequences: 2352
Number of extensions: 13777
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)