Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31232
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 237 7e-63
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 237 7e-63
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 237 7e-63
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 237 7e-63
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 237 7e-63
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 237 7e-63
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 236 1e-62
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 236 1e-62
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 236 1e-62
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 230 8e-61
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 222 2e-58
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 126 2e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 1e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 100 2e-21
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 88 5e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 80 1e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 62 3e-10
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 4.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 237 bits (579), Expect = 7e-63
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
ALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 237 bits (579), Expect = 7e-63
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
ALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 237 bits (579), Expect = 7e-63
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
ALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 237 bits (579), Expect = 7e-63
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
ALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 217 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 276
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 277 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 237 bits (579), Expect = 7e-63
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
ALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 247 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 306
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 307 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 237 bits (579), Expect = 7e-63
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
ALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 ALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 236 bits (577), Expect = 1e-62
Identities = 108/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
A+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 AMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 236 bits (577), Expect = 1e-62
Identities = 108/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
A+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 AMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 236 bits (577), Expect = 1e-62
Identities = 108/116 (93%), Positives = 113/116 (97%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
A+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 AMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 230 bits (562), Expect = 8e-61
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA 195
A+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITA
Sbjct: 261 AMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
Query: 196 LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 LAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 222 bits (543), Expect = 2e-58
Identities = 101/115 (87%), Positives = 108/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI L
Sbjct: 261 LFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHL 320
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 321 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 126 bits (304), Expect = 2e-29
Identities = 56/115 (48%), Positives = 80/115 (69%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +
Sbjct: 260 LFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKI 319
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 320 APADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (256), Expect = 1e-23
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = +1
Query: 94 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIG 264
D+DIR L++N ++GG ++ G +R+ + P TIK+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 265 GSILASLSTFQQMWISKEEYDESGPGIVHRKC 360
GSIL SL TFQQMW+SK EYDESG IV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 13/119 (10%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQP + +E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 265 LFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQL 324
Query: 199 -----------APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 336
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 325 YLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 88.2 bits (209), Expect = 5e-18
Identities = 34/104 (32%), Positives = 70/104 (67%)
Frame = +1
Query: 10 SRALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI 189
+ LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E+
Sbjct: 436 TEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQEL 495
Query: 190 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 321
+ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 496 STVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 80.2 bits (189), Expect = 1e-15
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
Frame = +1
Query: 22 FQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L
Sbjct: 290 FHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRL 349
Query: 199 A----------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 330
+ P I +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E
Sbjct: 350 SDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYME 409
Query: 331 SGPGI 345
GP I
Sbjct: 410 RGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++
Sbjct: 276 LFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSM 335
Query: 199 APSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 345
P+ + + + P+ W G L L+ + WI+++++DE G +
Sbjct: 336 LPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++
Sbjct: 276 LFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSM 335
Query: 199 APSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 345
P+ + + + P+ W G L L+ + WI+++++DE G +
Sbjct: 336 LPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +1
Query: 70 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 234
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 235 PERK----YSVWIGGSILASL-STFQQMWISKEEY 324
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 57 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 200
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 156 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 254
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = +3
Query: 81 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 260
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 261 RWIHPG 278
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,155,700
Number of Sequences: 27780
Number of extensions: 300191
Number of successful extensions: 864
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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