Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31232
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 221 5e-58
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 221 5e-58
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 219 1e-57
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 218 3e-57
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 218 3e-57
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 218 3e-57
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 213 9e-56
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 213 9e-56
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 200 9e-52
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 191 4e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 177 8e-45
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 169 2e-42
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 113 1e-25
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 100 8e-22
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 89 3e-18
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 84 7e-17
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 60 1e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 3e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 54 9e-08
At5g43500.2 68418.m05318 expressed protein 46 3e-05
At5g43500.1 68418.m05319 expressed protein 46 3e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 36 0.020
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.2
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 6.8
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 9.0
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 9.0
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 9.0
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 221 bits (539), Expect = 5e-58
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITAL
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 221 bits (539), Expect = 5e-58
Identities = 99/115 (86%), Positives = 108/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITAL
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 219 bits (535), Expect = 1e-57
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITAL
Sbjct: 263 LFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 218 bits (533), Expect = 3e-57
Identities = 98/115 (85%), Positives = 107/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITAL
Sbjct: 263 LFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 218 bits (533), Expect = 3e-57
Identities = 97/115 (84%), Positives = 107/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITAL
Sbjct: 263 LYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 218 bits (533), Expect = 3e-57
Identities = 97/115 (84%), Positives = 107/115 (93%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITAL
Sbjct: 263 LYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 213 bits (520), Expect = 9e-56
Identities = 96/115 (83%), Positives = 105/115 (91%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITAL
Sbjct: 263 LFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 213 bits (520), Expect = 9e-56
Identities = 96/115 (83%), Positives = 105/115 (91%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITAL
Sbjct: 263 LFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
APS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 200 bits (487), Expect = 9e-52
Identities = 89/115 (77%), Positives = 100/115 (86%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI AL
Sbjct: 264 LFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINAL 323
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
AP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 324 APPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 191 bits (465), Expect = 4e-49
Identities = 85/115 (73%), Positives = 99/115 (86%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI AL
Sbjct: 215 LFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINAL 274
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
A + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 275 AAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 177 bits (430), Expect = 8e-45
Identities = 81/99 (81%), Positives = 91/99 (91%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITAL
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITAL 322
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 315
APS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 169 bits (411), Expect = 2e-42
Identities = 74/114 (64%), Positives = 91/114 (79%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQPS +G ES GIHE NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL
Sbjct: 252 LFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNAL 311
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 360
PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 312 VPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 113 bits (271), Expect = 1e-25
Identities = 49/105 (46%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Frame = +1
Query: 55 GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 234
G+ V SI KCDVDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLAS 395
Query: 235 ---PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 360
ER++SVWIGGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 396 GNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 100 bits (240), Expect = 8e-22
Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Frame = +1
Query: 7 LSRALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKE 186
+ ALFQPS LG+E GI E + I + + L NTV+ GGTT G R QKE
Sbjct: 240 VGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKE 299
Query: 187 ITALAPSTIKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 348
L S I+ ++ PPE YS W+GG+ILA + Q ++K +YDE+GP +V
Sbjct: 300 AN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVV 358
Query: 349 HRKCF 363
HRKCF
Sbjct: 359 HRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/115 (34%), Positives = 66/115 (57%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 198
LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R++ E+ L
Sbjct: 306 LFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPL 365
Query: 199 APSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 363
P +KI + VW GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 366 VPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 84.2 bits (199), Expect = 7e-17
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 12/119 (10%)
Frame = +1
Query: 16 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI-- 189
ALF P + +E G+ + V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI
Sbjct: 261 ALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQD 320
Query: 190 ----TALAPS-----TIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 336
T L + ++++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 321 RYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDV-DIRKD--LYANTVMSGGTTMYPGIADRMQKEI 189
LFQP GM + +H+ V + CD + D + V++GG+ PG+++R+++E+
Sbjct: 356 LFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLEREL 415
Query: 190 TALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 324
PS+I I++I PP + W G ++++LS F W I+++++
Sbjct: 416 QDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Frame = +1
Query: 82 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI---------------- 213
I +D R+ LY N V+SGG+TM+ R+Q+++ + + +
Sbjct: 313 IQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPV 372
Query: 214 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 345
++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 373 EVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 54.0 bits (124), Expect = 9e-08
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Frame = +1
Query: 19 LFQPSFLGMESCGIHETVYNSIMKCDVD---IRKDLYANTVMSGGTTMYPGIADRMQKEI 189
LF P+ +G++ G+ E SI + D + + L ++ +M+GG ++ PG+ +R++ I
Sbjct: 602 LFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGI 661
Query: 190 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 336
+ P I ++ + W G S A+ F +K +YDE G
Sbjct: 662 RMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 46 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 222
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 223 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 336
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 46 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 222
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 223 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 336
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = +1
Query: 4 PLSRALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQK 183
P+S+ F+ + I E +Y I++ + KD Y N+ G + +YP ++K
Sbjct: 318 PISKMEFEFERRRLTKDDIRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRK 374
Query: 184 EITALAPSTIKIKIIAPPERKYS 252
+ L ++ K + PP+RK++
Sbjct: 375 QFAYLEENSGKSGPVIPPDRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 58 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 237
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 238 ERKYS 252
ERK++
Sbjct: 394 ERKHA 398
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -3
Query: 173 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 18
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 54 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 227
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 54 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 227
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 174 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 287
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,484,612
Number of Sequences: 28952
Number of extensions: 285957
Number of successful extensions: 832
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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