Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31228
         (418 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3HSZ9 Cluster: Putative uncharacterized protein; n=1; ...    32   4.1  
UniRef50_Q6F9U7 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  

>UniRef50_A3HSZ9 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 276

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 249 KLYKIPLITLSFCF*LSFFIPFGDN 323
           KLY I  I+L FCF + FF PFG N
Sbjct: 17  KLYAILAISLFFCFFMLFFQPFGVN 41


>UniRef50_Q6F9U7 Cluster: Putative uncharacterized protein; n=1;
           Acinetobacter sp. ADP1|Rep: Putative uncharacterized
           protein - Acinetobacter sp. (strain ADP1)
          Length = 121

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +1

Query: 274 HYPFVFNYHSLFLSETILLQSLQNSVKREPADIQDVFIQSSIY 402
           HY    NY+  F +  ++L  L+N VK+ P+D+Q+ F  ++IY
Sbjct: 10  HYTHKPNYY--FYAHKLVL-FLENHVKKHPSDVQETFNLNTIY 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,830,005
Number of Sequences: 1657284
Number of extensions: 4865447
Number of successful extensions: 11859
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11855
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)