Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31228
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.6  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   9.7  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   9.7  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 272 DQRNLIKFDLKNKK 231
           +QRN+ K DLKN K
Sbjct: 671 NQRNMYKLDLKNMK 684


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 189 WSYLLLVIPYLTL 151
           W+ +L+++P LTL
Sbjct: 189 WALILVIVPCLTL 201


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 160 FNFVVNSEIACGNINPFGVNIHVYKCFCVS 71
           FN VV  EIA   ++  GVN  + +C  +S
Sbjct: 79  FNEVVIREIAEIFLDENGVNKLITECSAIS 108


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 263 NLIKFDLKNKKRLKVNFTKAFLESAGAIY 177
           N++  DL+     + +FT  F  +AG  +
Sbjct: 54  NMLDMDLRGIYSNRTDFTTTFRPTAGMTF 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,362
Number of Sequences: 438
Number of extensions: 1697
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)