Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31228
         (418 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g23240.2 68414.m02908 caleosin-related family protein similar...    29   1.7  
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila...    26   8.9  

>At1g23240.2 68414.m02908 caleosin-related family protein similar to
           caleosin GB:AAF13743 GI:6478218 from [Sesamum indicum];
           similar to Ca+2-binding EF hand protein GB:AAB71227
           [Glycine max]; contains Pfam profilePF05042: Caleosin
           related protein
          Length = 174

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 259 RFL*SHYPFVFNYHSLFLSETILLQSLQNSVK--REPADIQDVFIQSSIY 402
           RF+ S +  +FN H+    + +  + +Q  +K  R+P DI   F+ S ++
Sbjct: 122 RFVESKFEEIFNKHARTHKDALTAEEIQKMLKTNRDPFDITGWFVVSELF 171


>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
           to nodule inception protein [Lotus japonicus]
           GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
          Length = 959

 Score = 26.2 bits (55), Expect = 8.9
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +1

Query: 241 FKSNFIRFL*SHYPFVFNYHSLFLSETILLQSLQNSVKREPADIQDVFIQSSI 399
           F  +  +F  + YP V +Y  +F   T    SLQ+S   + + I + F+ SSI
Sbjct: 424 FCRDITKFCKTQYPLV-HYALMFKLTTCFAISLQSSYTGDDSYILEFFLPSSI 475


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,506,908
Number of Sequences: 28952
Number of extensions: 104832
Number of successful extensions: 193
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)