Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31227
(454 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 264 1e-71
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 264 2e-71
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 264 2e-71
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 264 3e-71
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 264 3e-71
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 263 3e-71
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 263 3e-71
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 263 3e-71
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 263 3e-71
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 241 1e-64
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 193 5e-50
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 2e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 137 3e-33
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 110 4e-25
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 3e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 101 2e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 71 3e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 69 2e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 1e-10
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 30 0.64
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.5
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 3.4
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 4.5
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 4.5
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 4.5
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 5.9
At3g32904.1 68416.m04164 hypothetical protein 27 5.9
At5g07730.1 68418.m00886 expressed protein 27 7.8
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 7.8
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.8
At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.8
At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative / cel... 27 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 264 bits (648), Expect = 1e-71
Identities = 118/132 (89%), Positives = 126/132 (95%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET N+PAMYV
Sbjct: 125 MFETFNTPAMYV 136
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 264 bits (647), Expect = 2e-71
Identities = 118/132 (89%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET N+PAMYV
Sbjct: 125 MFETFNTPAMYV 136
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 264 bits (647), Expect = 2e-71
Identities = 118/132 (89%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET N+PAMYV
Sbjct: 125 MFETFNTPAMYV 136
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 264 bits (646), Expect = 3e-71
Identities = 117/132 (88%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET N+PAMYV
Sbjct: 125 MFETFNAPAMYV 136
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 264 bits (646), Expect = 3e-71
Identities = 117/132 (88%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET N+PAMYV
Sbjct: 125 MFETFNAPAMYV 136
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 263 bits (645), Expect = 3e-71
Identities = 118/132 (89%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET N PAMYV
Sbjct: 125 MFETFNVPAMYV 136
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 263 bits (645), Expect = 3e-71
Identities = 115/132 (87%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET NSPAMYV
Sbjct: 125 MFETFNSPAMYV 136
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 263 bits (645), Expect = 3e-71
Identities = 115/132 (87%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET NSPAMYV
Sbjct: 125 MFETFNSPAMYV 136
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 263 bits (645), Expect = 3e-71
Identities = 115/132 (87%), Positives = 125/132 (94%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ+
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 418 MFETLNSPAMYV 453
MFET NSPAMYV
Sbjct: 125 MFETFNSPAMYV 136
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 241 bits (591), Expect = 1e-64
Identities = 102/132 (77%), Positives = 122/132 (92%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 237
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQM 417
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQ+
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 418 MFETLNSPAMYV 453
MFE+ P+MY+
Sbjct: 126 MFESFAFPSMYI 137
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 193 bits (470), Expect = 5e-50
Identities = 87/127 (68%), Positives = 102/127 (80%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 252
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 253 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQMMFETL 432
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQ+MFE+
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 433 NSPAMYV 453
+ PAMYV
Sbjct: 119 DVPAMYV 125
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (391), Expect = 2e-40
Identities = 67/91 (73%), Positives = 83/91 (91%)
Frame = +1
Query: 181 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 360
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 361 LLTEAPLNPKANREKMTQMMFETLNSPAMYV 453
LLTEAPLNPKA+REKMTQ+MFET P+MY+
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYI 91
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 137 bits (332), Expect = 3e-33
Identities = 60/134 (44%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 231
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 232 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 411
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 412 QMMFETLNSPAMYV 453
+ MFE N +++
Sbjct: 122 ETMFEKYNFAGVFI 135
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 110 bits (265), Expect = 4e-25
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 22/154 (14%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 207
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 208 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 351
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 352 HPVLLTEAPLNPKANREKMTQMMFETLNSPAMYV 453
HP+LL E PLN + REK ++MFE PA+++
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFM 158
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 3e-23
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 192
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 193 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 369
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 370 EAPLNPKANREK 405
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 101 bits (242), Expect = 2e-22
Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 21/149 (14%)
Frame = +1
Query: 70 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 195
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 196 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 366
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 367 TEAPLNPKANREKMTQMMFETLNSPAMYV 453
TE+PL P +RE +++FET N P +Y+
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYI 153
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 71.3 bits (167), Expect = 3e-13
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 252
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 253 -----KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 414
+ P + ++ ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 415 MMFETLNSPAM 447
++FET PA+
Sbjct: 138 LLFETYGVPAV 148
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 68.5 bits (160), Expect = 2e-12
Identities = 37/127 (29%), Positives = 64/127 (50%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 252
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 253 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQMMFETL 432
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 433 NSPAMYV 453
++Y+
Sbjct: 122 GFSSLYI 128
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 62.5 bits (145), Expect = 1e-10
Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +1
Query: 70 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 246
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 247 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQMMF 423
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 424 ETLNSPAMY 450
ET N Y
Sbjct: 113 ETFNVSGFY 121
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 30.3 bits (65), Expect = 0.64
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 20 PQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 163
P H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 181 PGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 217 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 396
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 397 REK 405
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 217 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 396
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 397 REK 405
REK
Sbjct: 225 REK 227
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 176 PWWRGRPTMDG--KTARGASSPAKPALHM 96
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 6 VNTSVPNTNTHKVQDVRRRCCCA 74
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 6 VNTSVPNTNTHKVQDVRRRCCCA 74
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRP 151
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.1 bits (57), Expect = 5.9
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 234
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 235 RGILTL 252
+ L
Sbjct: 89 KTFAVL 94
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 221 SSPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 93
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 236 LLLWASSPT*ESFWPIPTITPWWRGRPTMDGKTARG 129
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTWFSK-TIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 183
+D+ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 283 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQMMFET 429
NW +E + + + + P LL EA + PK+ E Q M++T
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQT 528
>At1g73880.1 68414.m08556 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 473
Score = 26.6 bits (56), Expect = 7.8
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = -2
Query: 288 PVGDDTVLDGVLQSEDTSLA-LGLVTHVGV-FLAHTDHHALVARATHDGREDGAGRVVAG 115
PV D+ +L D +A GLV +A H A+ A TH G VVAG
Sbjct: 319 PVEKDSTRGNILDGFDDRVAGRGLVIRGWAPQVAVLRHRAVGAFLTHCGWNSVVEAVVAG 378
Query: 114 ETGLAHAGAIVDYKRSNIVVAHLELCVCLCWG 19
L Y +++VV L++ V C G
Sbjct: 379 VLMLTWPMRADQYTDASLVVDELKVGVRACEG 410
>At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol.
40, 323-332 (1999))
Length = 620
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 132 GRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 40
G +AGET A A A + ++RSN V + L L
Sbjct: 169 GSDLAGETAAAMAAASIVFRRSNPVYSRLLL 199
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,306,436
Number of Sequences: 28952
Number of extensions: 201451
Number of successful extensions: 736
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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