Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31221
         (448 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   2.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   4.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      20   9.3  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 252 PLEPWTAMDASSRPSFTSA 196
           P E W  M A+  P+FTS+
Sbjct: 80  PGEKWKEMRATLSPAFTSS 98


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 136 PGQIPVPISDQQRN 177
           PG IPVP  ++ RN
Sbjct: 242 PGAIPVPDKNRPRN 255


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 174 ESVARNKERS*TRAVRMHPSPSKVQAATLPLM 269
           E+V R+K     RAV    SP+ ++   +PL+
Sbjct: 103 ETVVRDKAVESLRAVAQQHSPADLENHFVPLV 134


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 48   WSR*PSLTFLTSCALAKLMPKLCRKMLTFSRTNTSTNIRPAT 173
            W+  PS  + ++           R+  T   T TST  RP T
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTT 1076


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 84  CALAKLMPKLCRKMLTFSRTNTSTNIRPAT 173
           C+  KL+  +     TF+ +N++TN  P T
Sbjct: 257 CSPKKLIVGIPFYGRTFTLSNSNTNYNPGT 286


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 205 YERSLFLATDSVAGLILVLVFVRENVSILRHN 110
           +  S+FL   +V  ++  L+F +E  S L  N
Sbjct: 21  FVNSIFLVMSAVTIILSSLIFNQEQWSSLNKN 52


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 175 NQWPGTR 195
           NQWPG R
Sbjct: 27  NQWPGVR 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,114
Number of Sequences: 336
Number of extensions: 2085
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)