Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31221
(448 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101807-1|AAI01808.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
BC093867-1|AAH93867.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
BC063038-1|AAH63038.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
BC047028-1|AAH47028.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
BC025710-1|AAH25710.1| 313|Homo sapiens SLC15A3 protein protein. 29 9.5
AY928335-1|AAX09677.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
AK223277-1|BAD96997.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
AK074439-1|BAB85084.1| 146|Homo sapiens protein ( Homo sapiens ... 29 9.5
AK023153-1|BAB14433.1| 374|Homo sapiens protein ( Homo sapiens ... 29 9.5
AF181995-1|AAF26298.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
AF181994-1|AAF26297.1| 374|Homo sapiens Fanconi anemia, complem... 29 9.5
>BC101807-1|AAI01808.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>BC093867-1|AAH93867.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>BC063038-1|AAH63038.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>BC047028-1|AAH47028.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>BC025710-1|AAH25710.1| 313|Homo sapiens SLC15A3 protein protein.
Length = 313
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 156 WYWYLSGKTSASCDTIWASAS 94
W+W L +TSASC WA+AS
Sbjct: 215 WWWRLFSRTSASC---WATAS 232
>AY928335-1|AAX09677.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>AK223277-1|BAD96997.1| 374|Homo sapiens Fanconi anemia,
complementation group F variant protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>AK074439-1|BAB85084.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ23859 fis, clone LNG08092. ).
Length = 146
Score = 28.7 bits (61), Expect = 9.5
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +2
Query: 158 YQTSNGISGQEQGALVNEG------REDASIAVQGSSGYTAPDGTPIQITYIADANGYQP 319
YQTS I Q Q + G ++ A + PD Q TY YQP
Sbjct: 12 YQTSYSIDEQSQQSYDYGGSGGPYSKQYAGCDYSQQGRFVPPDMMQPQQTYTGQI--YQP 69
Query: 320 SGAHLPTTPAP 352
+ A+ PTTP P
Sbjct: 70 TQAYPPTTPQP 80
>AK023153-1|BAB14433.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ13091 fis, clone NT2RP3002146. ).
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>AF181995-1|AAF26298.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
>AF181994-1|AAF26297.1| 374|Homo sapiens Fanconi anemia,
complementation group F protein.
Length = 374
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 39 SSLWSR*PSLTFLTSCALAKLMPKLCRK 122
SSLW R P FL A+A L P L R+
Sbjct: 190 SSLWERLPQNNFLKVIAVALLQPPLSRR 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,545,613
Number of Sequences: 237096
Number of extensions: 1509432
Number of successful extensions: 8014
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8010
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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