Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31221
         (448 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    32   0.22 
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    32   0.22 
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    27   4.7  
U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical...    27   6.2  
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    27   8.2  
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    27   8.2  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    27   8.2  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    27   8.2  

>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +2

Query: 221  DASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRT 400
            D   A + +S +  P+  P+ + +      Y    +++P    PLP P ++A  +++   
Sbjct: 946  DEQPASESTSAFDIPEHPPVIVPFRNAPIVYSSQTSNIPQIHPPLPPPRFLAMPMQF-SG 1004

Query: 401  HPPKPEVGQRI 433
            HPP   +G  I
Sbjct: 1005 HPPPVIMGPPI 1015


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +2

Query: 221  DASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPLPIPDYIARAIEYIRT 400
            D   A + +S +  P+  P+ + +      Y    +++P    PLP P ++A  +++   
Sbjct: 946  DEQPASESTSAFDIPEHPPVIVPFRNAPIVYSSQTSNIPQIHPPLPPPRFLAMPMQF-SG 1004

Query: 401  HPPKPEVGQRI 433
            HPP   +G  I
Sbjct: 1005 HPPPVIMGPPI 1015


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 314 QPSGAHLPTTPAPLPIPDYIARAIE-YIRTHPPKPEVGQR 430
           +PS    P+ P P P+P+ I   ++  +   P KP V +R
Sbjct: 47  EPSSPTRPSEPIPPPLPEPIPELVQILLAAEPNKPSVPKR 86


>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 116 SQDADVFPDKYQYQYQTSNGISGQEQGALVNEGREDASI 232
           S  + VFP + +YQY+   G+   EQ  L + G  D ++
Sbjct: 558 SSSSTVFPTRSKYQYRPGKGLERAEQDYL-SRGNGDITL 595


>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 109 LGISFASAHDVRNVSDGYR--DQSEEDVSSHF 20
           LGI++  +H VRN++DG     QSE D +  F
Sbjct: 304 LGINYYLSHIVRNLNDGEEPASQSERDAAYAF 335


>AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical
           protein F41E6.11 protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 311 YQPSGAHLPTTPAPLPIPDYIARAIEYIRTHPPKPEVGQ 427
           YQP+   +P  PAP   P Y   A   +  + P P   Q
Sbjct: 181 YQPTYCAVPPCPAPAATPVYAQPAPRPMPVYAPAPACAQ 219


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +2

Query: 101  DAQIVSQDAD---VFPDKYQYQYQTSNGISGQEQGALVNEGREDASIAVQGSSGYTAPDG 271
            D QI+S DA    V+PD        +  + G+    ++  G +  ++    S     PDG
Sbjct: 2984 DGQILSTDASGNYVYPDPGLDSQILTTDVYGKPIYTVI--GPDGTALPTDASGAAIGPDG 3041

Query: 272  TPIQITYIADANGYQPSGAHLPT 340
            TPI      +       G+ LPT
Sbjct: 3042 TPISTDETGEP--LDKDGSILPT 3062


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
            protein K07E12.1a protein.
          Length = 13100

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +2

Query: 101  DAQIVSQDAD---VFPDKYQYQYQTSNGISGQEQGALVNEGREDASIAVQGSSGYTAPDG 271
            D QI+S DA    V+PD        +  + G+    ++  G +  ++    S     PDG
Sbjct: 3029 DGQILSTDASGNYVYPDPGLDSQILTTDVYGKPIYTVI--GPDGTALPTDASGAAIGPDG 3086

Query: 272  TPIQITYIADANGYQPSGAHLPT 340
            TPI      +       G+ LPT
Sbjct: 3087 TPISTDETGEP--LDKDGSILPT 3107


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
            protein.
          Length = 13100

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +2

Query: 101  DAQIVSQDAD---VFPDKYQYQYQTSNGISGQEQGALVNEGREDASIAVQGSSGYTAPDG 271
            D QI+S DA    V+PD        +  + G+    ++  G +  ++    S     PDG
Sbjct: 3029 DGQILSTDASGNYVYPDPGLDSQILTTDVYGKPIYTVI--GPDGTALPTDASGAAIGPDG 3086

Query: 272  TPIQITYIADANGYQPSGAHLPT 340
            TPI      +       G+ LPT
Sbjct: 3087 TPISTDETGEP--LDKDGSILPT 3107


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 164  TSNGISGQEQGALVNEGREDASIAVQG 244
            T + +S ++QG L+  GR+D+ + V+G
Sbjct: 1088 TGDEVSKRKQGGLIFMGRKDSQVKVRG 1114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,834,140
Number of Sequences: 27780
Number of extensions: 209527
Number of successful extensions: 675
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)