Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31219
         (537 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    27   0.40 
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    25   1.2  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    25   1.2  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   2.8  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   3.7  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   3.7  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   3.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.6  

>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = +1

Query: 298 TKNSGKRSDCTTRKATVTFPRRACARSSGNWTSS*LTMNSMASSKRSTLTEAAPPTSTSS 477
           +++ G ++  T R  T T   R    ++ +W ++  T  +  ++K  T T  + PT+ S 
Sbjct: 90  SQSPGDQTTTTLRPTTTTL--RPTTTTTTDWITT-TTTEATTTTKFPTTTTTSAPTTPSQ 146

Query: 478 W 480
           W
Sbjct: 147 W 147


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query: 263 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWL---PHHSQDISHEVTG 126
           +GQ+  + +F   RF   DL++KF+  +  E+L   P H +      +G
Sbjct: 130 AGQNIAITQFFGYRFTEKDLIHKFVSSWWSEYLDARPEHVRKYPSSYSG 178


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query: 263 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWL---PHHSQDISHEVTG 126
           +GQ+  + +F   RF   DL++KF+  +  E+L   P H +      +G
Sbjct: 130 AGQNIAITQFFGYRFTEKDLIHKFVSSWWSEYLDARPEHVRKYPSSYSG 178


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 388 WTSS*LTMNSMASSKRSTLTEAAPP---TSTSSW 480
           WT S  T  + AS+  +T ++  PP   T+T+ W
Sbjct: 189 WTDSTATTTTPASTTTTTWSDLPPPPPTTTTTVW 222


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +1

Query: 355 PRRACARSSGNWTSS*LTMNSMASSKRSTLTEAAPP---TSTSSW 480
           PR     ++  WT S  T  + A +  +T ++  PP   T+T+ W
Sbjct: 178 PRPPTTTTTTVWTDSTATTTTHAPTTTTTWSDLPPPPPTTTTTVW 222


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 467 EVGGAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 363
           E+  AA+VSV+++ EAI     +L  Q   +  QA
Sbjct: 278 ELAAAANVSVEVIKEAIRVRQQELRAQKQYEKQQA 312


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -2

Query: 467 EVGGAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 363
           E+  AA+VSV+++ EAI   V Q  ++ PE + +A
Sbjct: 285 ELAAAANVSVEVIKEAIR--VRQQELRGPEAVREA 317


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -2

Query: 263 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWLPHHSQDISHEV 132
           S Q++ +  +  T F+G D L +FL      ++ +H + +S ++
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDL 377


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -2

Query: 263 SGQSYELGEFQTTRFVGVDLLNKFLEDFLVEWLPHHSQDISHEV 132
           S Q++ +  +  T F+G D L +FL      ++ +H + +S ++
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDL 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,813
Number of Sequences: 2352
Number of extensions: 9941
Number of successful extensions: 30
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)