Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31214
(347 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17KV2 Cluster: Phd finger protein; n=1; Aedes aegypti|... 47 8e-05
UniRef50_A7S6Q6 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 46 1e-04
UniRef50_UPI0000D56B1D Cluster: PREDICTED: similar to CG1845-PA;... 46 2e-04
UniRef50_UPI0000519F9B Cluster: PREDICTED: similar to CG1845-PA;... 46 2e-04
UniRef50_Q7JVP4 Cluster: GH12223p; n=4; Diptera|Rep: GH12223p - ... 46 2e-04
UniRef50_UPI00015B4AFA Cluster: PREDICTED: similar to ENSANGP000... 44 7e-04
UniRef50_A0NGV8 Cluster: ENSANGP00000030595; n=1; Anopheles gamb... 44 7e-04
UniRef50_P55201 Cluster: Peregrin; n=39; Bilateria|Rep: Peregrin... 44 7e-04
UniRef50_Q4RX72 Cluster: Chromosome 11 SCAF14979, whole genome s... 42 0.004
UniRef50_Q803M2 Cluster: Bromodomain and PHD finger containing, ... 41 0.005
UniRef50_Q9ULD4 Cluster: Bromodomain and PHD finger-containing p... 41 0.005
UniRef50_Q4T5W6 Cluster: Chromosome undetermined SCAF9067, whole... 39 0.027
UniRef50_Q5RFV0 Cluster: Novel protein similar to vertebrate bro... 38 0.048
UniRef50_Q675W8 Cluster: Brpf1 protein-like protein; n=1; Oikopl... 37 0.083
UniRef50_O95696 Cluster: Bromodomain-containing protein 1; n=15;... 36 0.15
UniRef50_Q4P1I4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.25
UniRef50_Q75BS8 Cluster: ACR193Cp; n=2; Saccharomycetaceae|Rep: ... 35 0.34
UniRef50_Q6FMU0 Cluster: Similar to tr|Q12311 Saccharomyces cere... 34 0.59
UniRef50_A7TMA4 Cluster: Putative uncharacterized protein; n=1; ... 33 1.0
UniRef50_Q5KFB7 Cluster: Bromodomain and PHD finger-containing p... 33 1.4
UniRef50_Q86X06 Cluster: BRD1 protein; n=22; Euteleostomi|Rep: B... 33 1.8
UniRef50_A7EGB2 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_A6SKH0 Cluster: Putative uncharacterized protein; n=3; ... 32 3.1
UniRef50_UPI0000F30D36 Cluster: UPI0000F30D36 related cluster; n... 31 5.5
UniRef50_A5G3Z1 Cluster: Glycosyl transferase, family 2; n=1; Ge... 31 5.5
UniRef50_P63484 Cluster: Uncharacterized oxidoreductase Rv2298/M... 31 5.5
UniRef50_P12475 Cluster: Non-structural RNA-binding protein 53; ... 31 5.5
UniRef50_UPI0000DAE420 Cluster: hypothetical protein Rgryl_01000... 31 7.2
UniRef50_Q59UG0 Cluster: Potential RNAseP/MRP complex component;... 31 7.2
UniRef50_A0QAC5 Cluster: Periplasmic solute binding protein fami... 30 9.5
UniRef50_Q8IE44 Cluster: Putative uncharacterized protein MAL13P... 30 9.5
UniRef50_Q4QBW0 Cluster: Putative uncharacterized protein; n=3; ... 30 9.5
UniRef50_Q9VDY1 Cluster: Putative DNA helicase Ino80; n=2; Sopho... 30 9.5
>UniRef50_Q17KV2 Cluster: Phd finger protein; n=1; Aedes
aegypti|Rep: Phd finger protein - Aedes aegypti
(Yellowfever mosquito)
Length = 1142
Score = 47.2 bits (107), Expect = 8e-05
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPNT 69
QWL RCLQSPSR V+CVLCPNT
Sbjct: 310 QWLCRRCLQSPSRSVDCVLCPNT 332
>UniRef50_A7S6Q6 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 813
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RCLQSPSR+V+CVLCPN
Sbjct: 298 QWLCRRCLQSPSRVVDCVLCPN 319
>UniRef50_UPI0000D56B1D Cluster: PREDICTED: similar to CG1845-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG1845-PA - Tribolium castaneum
Length = 1031
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RCLQSPSR V+CVLCPN
Sbjct: 280 QWLCRRCLQSPSRAVDCVLCPN 301
>UniRef50_UPI0000519F9B Cluster: PREDICTED: similar to CG1845-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG1845-PA
- Apis mellifera
Length = 895
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RCLQSPSR V+CVLCPN
Sbjct: 237 QWLCRRCLQSPSRAVDCVLCPN 258
>UniRef50_Q7JVP4 Cluster: GH12223p; n=4; Diptera|Rep: GH12223p -
Drosophila melanogaster (Fruit fly)
Length = 1430
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RCLQSPS+ VNCVLCPN
Sbjct: 324 QWLCRRCLQSPSKPVNCVLCPN 345
>UniRef50_UPI00015B4AFA Cluster: PREDICTED: similar to
ENSANGP00000028929; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000028929 - Nasonia
vitripennis
Length = 987
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RCLQSPSR V+C LCPN
Sbjct: 257 QWLCRRCLQSPSRAVDCALCPN 278
>UniRef50_A0NGV8 Cluster: ENSANGP00000030595; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030595 - Anopheles gambiae
str. PEST
Length = 310
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 147 PAKQLITEEKMGAHLNGLHISTEYT*HSL 233
P+KQ +TEE M +H N LH+STEYT H +
Sbjct: 109 PSKQFLTEEVMSSHFNNLHLSTEYTAHDI 137
>UniRef50_P55201 Cluster: Peregrin; n=39; Bilateria|Rep: Peregrin -
Homo sapiens (Human)
Length = 1214
Score = 44.0 bits (99), Expect = 7e-04
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RCLQSPSR V+C LCPN
Sbjct: 314 QWLCRRCLQSPSRAVDCALCPN 335
>UniRef50_Q4RX72 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=7; Euteleostomi|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1523
Score = 41.5 bits (93), Expect = 0.004
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CLQSPSR V+CVLCPN
Sbjct: 268 QWLCRCCLQSPSRPVDCVLCPN 289
>UniRef50_Q803M2 Cluster: Bromodomain and PHD finger containing, 1;
n=6; Eukaryota|Rep: Bromodomain and PHD finger
containing, 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 899
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RC QSPSR V+C LCPN
Sbjct: 347 QWLCRRCPQSPSRAVDCALCPN 368
>UniRef50_Q9ULD4 Cluster: Bromodomain and PHD finger-containing
protein 3; n=28; Euteleostomi|Rep: Bromodomain and PHD
finger-containing protein 3 - Homo sapiens (Human)
Length = 1205
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CLQSPSR V+C+LCPN
Sbjct: 253 QWLCRCCLQSPSRPVDCILCPN 274
>UniRef50_Q4T5W6 Cluster: Chromosome undetermined SCAF9067, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF9067, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 716
Score = 38.7 bits (86), Expect = 0.027
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CLQSP + V+CVLCPN
Sbjct: 268 QWLCRCCLQSPQKPVDCVLCPN 289
>UniRef50_Q5RFV0 Cluster: Novel protein similar to vertebrate
bromodomain containing 1; n=4; Clupeocephala|Rep: Novel
protein similar to vertebrate bromodomain containing 1 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1145
Score = 37.9 bits (84), Expect = 0.048
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CL SP++ NC+LCPN
Sbjct: 240 QWLCRHCLHSPTQPANCILCPN 261
>UniRef50_Q675W8 Cluster: Brpf1 protein-like protein; n=1;
Oikopleura dioica|Rep: Brpf1 protein-like protein -
Oikopleura dioica (Tunicate)
Length = 1062
Score = 37.1 bits (82), Expect = 0.083
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL RC SPSR V+CVLCP+
Sbjct: 356 QWLCRRCQFSPSRPVDCVLCPS 377
>UniRef50_O95696 Cluster: Bromodomain-containing protein 1; n=15;
Tetrapoda|Rep: Bromodomain-containing protein 1 - Homo
sapiens (Human)
Length = 1058
Score = 36.3 bits (80), Expect = 0.15
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CLQS +R +CVLCPN
Sbjct: 255 QWLCRHCLQSRARPADCVLCPN 276
>UniRef50_Q4P1I4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1227
Score = 35.5 bits (78), Expect = 0.25
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL +C SP R V+C+LCP+
Sbjct: 196 QWLCRKCTVSPDRAVSCILCPH 217
>UniRef50_Q75BS8 Cluster: ACR193Cp; n=2; Saccharomycetaceae|Rep:
ACR193Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 729
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCP-NTARF 60
QWL RC+ S +R +NC+ CP NT F
Sbjct: 288 QWLCRRCMISKNRKINCLFCPSNTGAF 314
>UniRef50_Q6FMU0 Cluster: Similar to tr|Q12311 Saccharomyces
cerevisiae YPR031w; n=1; Candida glabrata|Rep: Similar
to tr|Q12311 Saccharomyces cerevisiae YPR031w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 761
Score = 34.3 bits (75), Expect = 0.59
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPNT 69
QWL RC S ++ VNCV CP+T
Sbjct: 298 QWLCRRCFISRNKQVNCVTCPST 320
>UniRef50_A7TMA4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 725
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CL S +R VNC LCP+
Sbjct: 275 QWLCRLCLVSKNRKVNCALCPS 296
>UniRef50_Q5KFB7 Cluster: Bromodomain and PHD finger-containing
protein 3, putative; n=2; Filobasidiella neoformans|Rep:
Bromodomain and PHD finger-containing protein 3,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1064
Score = 33.1 bits (72), Expect = 1.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL +C SP V+C+ CPN
Sbjct: 165 QWLCRKCTVSPENPVSCIFCPN 186
>UniRef50_Q86X06 Cluster: BRD1 protein; n=22; Euteleostomi|Rep: BRD1
protein - Homo sapiens (Human)
Length = 1189
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 137 QWLFSRCLQSPSRLVNCVLCPN 72
QWL CLQS +R +CVLC N
Sbjct: 255 QWLCRHCLQSRARPADCVLCHN 276
>UniRef50_A7EGB2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 197
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 171 EKMGAHLNGLHISTEYT*HSLACEDMMDVGMDRPVPSTCTANIP 302
EK H G HI+T YT HSL C + + PST + + P
Sbjct: 24 EKTFHHFCG-HITTTYTQHSLLCSSSQNQVITNQTPSTSSGSSP 66
>UniRef50_A6SKH0 Cluster: Putative uncharacterized protein; n=3;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 610
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 321 LLISRS*VCWQCRLKVQVCPYLHPSYLRRLESVMYTLLIYGVRLD 187
LL S+S CW CRL+ + C PS ES+ T YG + D
Sbjct: 4 LLRSKS-GCWTCRLRKKKCDERKPSPCSTCESLAITCYGYGTKPD 47
>UniRef50_UPI0000F30D36 Cluster: UPI0000F30D36 related cluster; n=1;
Bos taurus|Rep: UPI0000F30D36 UniRef100 entry - Bos
Taurus
Length = 62
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 52 LNTNLAVLGHNTQLTRRDGDCKHRLKSH 135
L+ L GH Q T R+GDC+ R SH
Sbjct: 19 LSAVLGPWGHRAQSTAREGDCRQRRHSH 46
>UniRef50_A5G3Z1 Cluster: Glycosyl transferase, family 2; n=1;
Geobacter uraniumreducens Rf4|Rep: Glycosyl transferase,
family 2 - Geobacter uraniumreducens Rf4
Length = 376
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 173 FFSYQLFCRSQVQWLFSRCLQSPSRLVNCVLCPNTARFVLSKILYPEYYLIS 18
FFSYQ FC ++WL L S + N L N+ + + +L+ +Y I+
Sbjct: 277 FFSYQYFCHKLLRWLVPLFLFS-ALAANAALSLNSGGYSVLLLLHLAFYGIA 327
>UniRef50_P63484 Cluster: Uncharacterized oxidoreductase
Rv2298/MT2355; n=11; Mycobacterium|Rep: Uncharacterized
oxidoreductase Rv2298/MT2355 - Mycobacterium
tuberculosis
Length = 323
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -3
Query: 264 PYLHPSYLRRLESVMYTLLIYGVRLDARPFFLQLSIVLQVSGTVALQSVLAV 109
P LRR+E ++ TL V +DA+P + L+ ++ + G VA+ +V
Sbjct: 223 PLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGVVAIPGASSV 274
>UniRef50_P12475 Cluster: Non-structural RNA-binding protein 53;
n=71; Rotavirus|Rep: Non-structural RNA-binding protein
53 - Bovine rotavirus (strain RF)
Length = 491
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 205 IWSPFRCAPIFSSVINCFAGLRYSGSSVGACSHHPALSTVYYVPILPGLC 56
+W FR I+++V++ L S +VG CS S Y+P L +C
Sbjct: 335 VWEDFRLRKIYNNVMDFIRALMKSNGNVGHCSSQE--SVYKYIPDLFLIC 382
>UniRef50_UPI0000DAE420 Cluster: hypothetical protein
Rgryl_01000288; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000288 - Rickettsiella
grylli
Length = 375
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = -2
Query: 184 APIFSSVIN---CFAGLRYSGS--SVGACSHHPALSTVYYVPILPGLC*VKFCTPSI 29
AP+F+ +I CF GLR SGS SVG + + ++++ + L + F T +I
Sbjct: 319 APVFALIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFIIVADALFSILFSTLNI 375
>UniRef50_Q59UG0 Cluster: Potential RNAseP/MRP complex component;
n=3; Candida albicans|Rep: Potential RNAseP/MRP complex
component - Candida albicans (Yeast)
Length = 779
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 197 TPYINRVYMTLSSLRRYDGCRYGQTCTFNLHCQHTYEREIKRTHNN 334
+P + ++ +LS ++ D G T TFNL ++R K HN+
Sbjct: 382 SPDLKNIWASLSKIKDSDLVPVGTTFTFNLQDPRIWQRPTKLRHNH 427
>UniRef50_A0QAC5 Cluster: Periplasmic solute binding protein family
protein; n=2; Mycobacterium avium|Rep: Periplasmic
solute binding protein family protein - Mycobacterium
avium (strain 104)
Length = 311
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -2
Query: 301 GMLAVQVEGTGLSIPTSIISSQARECHVYSVDIWSPFRCAPIFSSVINCFAGLRYSGSSV 122
G +A V G +++ SI+S ++ H Y SP A I + + F G Y G
Sbjct: 53 GSVARAVAGGHVAV-ASILSGSDQDPHSYEA---SPSDAAAIADAGLVVFNGGGYDGWVD 108
Query: 121 GACSHHPALSTVYYVPILP 65
+HHP ++ V +LP
Sbjct: 109 DVLAHHPGVARVDAYALLP 127
>UniRef50_Q8IE44 Cluster: Putative uncharacterized protein
MAL13P1.150; n=3; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.150 - Plasmodium
falciparum (isolate 3D7)
Length = 500
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 173 KNGRASKRTPYINRVYMTLSSLRRYDGCRYGQTCTFNLHCQHTYEREIKR 322
K G+ + Y+ +Y L S R + C +NL C+H+Y R +KR
Sbjct: 262 KKGQHFLKINYLKNMYFLLLSKRMKE-------CLYNLKCKHSYRRLMKR 304
>UniRef50_Q4QBW0 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 250
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = -2
Query: 283 VEGTGLSIPTSIISSQARECHVYSVDIWSPFRCAPI---FSSVINCFAGLRYSGSSVGAC 113
VE +S+ T Q R CH ++ + R I +++ N FAG S+
Sbjct: 107 VEARSISLDTQNEEGQDRSCHDIPREVPAGKRATAITGNMATLPNTFAGDHQLYRSLNCI 166
Query: 112 SHHPALSTVYYVPIL 68
HP LS + P++
Sbjct: 167 HRHPRLSNLLLAPLV 181
>UniRef50_Q9VDY1 Cluster: Putative DNA helicase Ino80; n=2;
Sophophora|Rep: Putative DNA helicase Ino80 - Drosophila
melanogaster (Fruit fly)
Length = 1638
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 148 GLRYSGSSVGACSHHPALSTVYYVP 74
G+ S SSVG S+HP LS YVP
Sbjct: 1404 GITSSASSVGTDSNHPTLSQETYVP 1428
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,853,297
Number of Sequences: 1657284
Number of extensions: 6744291
Number of successful extensions: 17896
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 17324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17892
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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