Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31214
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.22 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   3.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   8.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.3  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 162 SIVLQVSGTVALQSVLAVTIPPCQLCIMSQYCQVCVK 52
           SIV  V GT+ + +    T+    LC   QYCQ+  K
Sbjct: 63  SIVAMVMGTI-VNAFSCYTVLAPVLCKRQQYCQLMSK 98


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 41  TKFYLTQTWQYWD 79
           T F L Q W  WD
Sbjct: 278 TPFILAQLWATWD 290


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 97  LSTVYYVPILPGLC 56
           LSTVY+  +  GLC
Sbjct: 396 LSTVYWFTVEFGLC 409


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1

Query: 73  LGHNTQLT 96
           LGHN+QLT
Sbjct: 425 LGHNSQLT 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,077
Number of Sequences: 336
Number of extensions: 1950
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)