Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31212
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57834| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_46682| Best HMM Match : Fibrinogen_C (HMM E-Value=0.022) 31 0.59
SB_4970| Best HMM Match : IBV_3C (HMM E-Value=2.2) 30 1.4
SB_21829| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077) 30 1.8
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_11312| Best HMM Match : Ank (HMM E-Value=2.1e-18) 29 3.1
SB_33861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024) 28 7.2
>SB_57834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 405 ENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTYRVDYTADENGF 551
EN L + GK + + + I G+YEY GP + RV AD GF
Sbjct: 154 ENSTLTQNCGKW-GISSSSVEINRWGYYEYTGPKRMYARVIVWADHLGF 201
>SB_46682| Best HMM Match : Fibrinogen_C (HMM E-Value=0.022)
Length = 395
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 396 YETENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTYRVDYTADENGF 551
+ ++N L + GK + + + I G+YEY GP + RV AD GF
Sbjct: 315 FTSKNSTLTQNCGKW-GISSSSVEINRWGYYEYTGPKRMYARVIVWADHLGF 365
>SB_4970| Best HMM Match : IBV_3C (HMM E-Value=2.2)
Length = 1094
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 149 VGTKED--LSKYLGDAYKGSSIVPLPVVKPTIPVPVHTH 259
V TK+D LS DAY GS+ LP++ PT P PV+ H
Sbjct: 454 VRTKKDKKLSTTEEDAYTGSA-QDLPLLPPTHPSPVYCH 491
>SB_21829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 252 TPTYVASKVVTPTYVA-SKVVPP 317
TP YVA V PTYVA S V PP
Sbjct: 284 TPPYVAPSYVAPTYVAPSYVAPP 306
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 252 TPTYVASKVVTPTYVASKVVPPS 320
TPT+VA VTP YV V PS
Sbjct: 229 TPTFVAPPYVTPPYVTPPYVSPS 251
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 255 PTYVASKVVTPTYVASKVVPPSGAGYDY 338
PTYVA V P YVA V PS Y
Sbjct: 295 PTYVAPSYVAPPYVAPLYVAPSYVAQPY 322
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 255 PTYVASKVVTPTYVASKVVPP 317
PTYVA +TPT+VA V P
Sbjct: 220 PTYVALPYITPTFVAPPYVTP 240
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 255 PTYVASKVVTPTYVASKVVPPSGAGYDY 338
PT+VA VTP YVA V P+ Y
Sbjct: 275 PTFVAPPYVTPPYVAPSYVAPTYVAPSY 302
>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
Length = 677
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +1
Query: 208 CSPARREA--YHSRAS----SHPHTLPARWSHPHTLPARWSH 315
C P + +A YH + +HP A W HP+ A W H
Sbjct: 262 CHPTKTQANWYHPTKTQANLNHPIKTQANWCHPNKTQANWCH 303
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP A W+HP A W+H
Sbjct: 313 HPTKTQANWNHPSKTQANWNH 333
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 214 PARREAYHSRASSHPHTLPARWSHPHTLPARWSH 315
P++ +AY HP A W+HP A W+H
Sbjct: 414 PSKTQAY----LCHPTKTHANWNHPSKTWANWNH 443
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP A W+HP A W H
Sbjct: 383 HPTKTQANWNHPSKTQANWYH 403
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP+ A W HP+ A W+H
Sbjct: 218 HPNKTQANWYHPNKTQANWNH 238
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 214 PARREAYHSRASSHPHTLPARWSHPHTLPARWSH 315
P++ +AY HP A W+HP A W+H
Sbjct: 169 PSKTQAY----LCHPTKTQANWNHPSKTRANWNH 198
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP+ A W+HP A W H
Sbjct: 228 HPNKTQANWNHPTKTQANWYH 248
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Frame = +1
Query: 208 CSPARREA--YHSRASS----HPHTLPARWSHPHTLPARWSH 315
C P + +A YH + HP A W HP A W H
Sbjct: 457 CHPTKTQANWYHPSKTQANWYHPTKTQANWYHPSKTKANWYH 498
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP A W+HP A W+H
Sbjct: 78 HPTKTHANWNHPSKTRANWNH 98
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Frame = +1
Query: 208 CSPARREA--YHSRAS----SHPHTLPARWSHPHTLPARWSH 315
C P + +A YH + +HP A W HP A W H
Sbjct: 217 CHPNKTQANWYHPNKTQANWNHPTKTQANWYHPTKTQANWYH 258
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP A W HP A W+H
Sbjct: 528 HPTKTQANWCHPTKTQANWNH 548
>SB_11312| Best HMM Match : Ank (HMM E-Value=2.1e-18)
Length = 516
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 270 SKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENKILAEEAGKVENV 449
+ ++ P V +K P G DY Y + D +A YH L E +E++
Sbjct: 183 ANIIAPISVVNKF--PPGTVVDYAYNVFYQDRKIAHTPYHALTVGERDCYNARRDMLEHL 240
Query: 450 G 452
G
Sbjct: 241 G 241
>SB_33861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1205
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +3
Query: 348 IIRYDNDVAPEGYHYLYETENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTYRVD 527
I+RYD + P Y E++I E K +++ G+ GF+E +G D
Sbjct: 491 IVRYDRNKVPSLYQLFKFIESRIEFELRTKHKSIFGYALGVIFAGFFEGIGMFKPKLG-D 549
Query: 528 YTADENGFVA 557
+ENG VA
Sbjct: 550 SKLNENGHVA 559
>SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 236 IPVPVHTHIRCQQGGHTHIR 295
+P+ HTHIR HTHIR
Sbjct: 205 LPLTQHTHIRLPSTQHTHIR 224
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 236 IPVPVHTHIRCQQGGHTHIR 295
+P HTHIR HTHIR
Sbjct: 145 LPSTQHTHIRLHSTQHTHIR 164
>SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024)
Length = 180
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 253 HPHTLPARWSHPHTLPARWSH 315
HP A W+HP A W+H
Sbjct: 158 HPTKTHANWNHPSKTRANWNH 178
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,290
Number of Sequences: 59808
Number of extensions: 289376
Number of successful extensions: 1148
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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