Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31211
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q823K9 Cluster: CBS domain protein; n=7; Chlamydiaceae|...    33   5.4  
UniRef50_Q654P6 Cluster: Aminotransferase-like; n=24; Oryza sati...    33   5.4  
UniRef50_A0DL53 Cluster: Chromosome undetermined scaffold_55, wh...    33   5.4  
UniRef50_Q54SN2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_Q823K9 Cluster: CBS domain protein; n=7;
           Chlamydiaceae|Rep: CBS domain protein - Chlamydophila
           caviae
          Length = 404

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
 Frame = -2

Query: 464 VSLR*PKLKYIMFKNTLIFRMRNTIIRKRYHNFAGNFCAGFKLN*GMTSYNMGLDNRRCD 285
           VS    +L+Y + K+    R  N +IR+ Y  F G    G  +     +  +G ++ R +
Sbjct: 30  VSFNRVRLQYYLTKDHKKARYINFLIRRPYRLF-GTVMLGVNI-----ALQVGSESAR-N 82

Query: 284 VYKACRDSPDYPPMSSI---VNI*QLYPL---HNIPLSLLFEDSYGAGFAHYRHH 138
            YKA   SPDY P + I   V   +L+PL     IP  L     +GA   +Y H+
Sbjct: 83  CYKALGFSPDYAPFTQIFLVVIFAELFPLTISRKIPERLAL---WGAPILYYSHY 134


>UniRef50_Q654P6 Cluster: Aminotransferase-like; n=24; Oryza
           sativa|Rep: Aminotransferase-like - Oryza sativa subsp.
           japonica (Rice)
          Length = 889

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 245 WVDNLDCH--DMPYRHHIYGYPGPYYMMSFLNLI*IPRKNYPQNY 373
           W+D    H  D P+ H ++ +P P  ++   NL+ IP  ++  +Y
Sbjct: 108 WLDPFSSHEIDFPFSHRVFFFPIPLDLLHLSNLVAIPSLSHENHY 152


>UniRef50_A0DL53 Cluster: Chromosome undetermined scaffold_55, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_55,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 772

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -1

Query: 627 AIIFDLIARIFTAIHYVTNLYFTTAKPPTYYLVLKMELQCIRNIYTI 487
           +I+   + ++ T + +V N+YF   +P  YY+V+   + CI    +I
Sbjct: 468 SIVISSLTKLSTTLFFVMNIYFYYWQPYAYYVVIICNIVCIATCISI 514


>UniRef50_Q54SN2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 182

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -1

Query: 600 IFTAIHYVTNLYFTTAKPPTYYLVLKMEL 514
           IF+ + ++   Y T+ +PPT+YLVL++ L
Sbjct: 77  IFSVLLFIYGTYITSKEPPTFYLVLEVVL 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,762,261
Number of Sequences: 1657284
Number of extensions: 14649820
Number of successful extensions: 35343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35288
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)