Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31210
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVL9 Cluster: Putative uncharacterized protein MSV223...    33   6.5  
UniRef50_Q8IBS6 Cluster: Queuine tRNA-ribosyltransferase; putati...    33   8.6  

>UniRef50_Q9YVL9 Cluster: Putative uncharacterized protein MSV223;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV223 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 171

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -3

Query: 462 FYVTKYKTDTLKIVYCFCIIYGIPELNLILIYLFMYYSFIKL 337
           +Y+  Y    L ++Y FC+I GI   +  ++Y+ + Y FI +
Sbjct: 55  YYIIFYTISGLSLIYLFCLINGIDHGS--IVYIILVYCFISI 94


>UniRef50_Q8IBS6 Cluster: Queuine tRNA-ribosyltransferase; putative;
           n=3; Plasmodium|Rep: Queuine tRNA-ribosyltransferase;
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 751

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -2

Query: 586 LNF*KAKLHYFYSNRKILLTRFMVMFRNIFTILVETHVM-TNILCNKI*NRYIENSVLFL 410
           L + KA LHY  S R   +T  ++   NI+  L   H+M   I  NK+ N++I     FL
Sbjct: 581 LKYTKAALHYLISKRN-TITNVLLTLHNIYFTLYMCHLMRVAIFSNKL-NQFI---TTFL 635

Query: 409 YN 404
           YN
Sbjct: 636 YN 637


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,548,552
Number of Sequences: 1657284
Number of extensions: 9790708
Number of successful extensions: 19071
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19059
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)