Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31208
(509 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 73 2e-13
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 56 1e-08
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 34 0.076
05_01_0265 + 2037518-2037608,2038101-2038348,2038425-2038551,203... 31 0.41
01_06_1462 + 37530509-37530874,37531012-37531099,37531352-375314... 30 1.2
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 29 1.6
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 29 1.6
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 29 1.6
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 29 2.9
08_01_1056 + 10752363-10752503,10752711-10752771,10753483-107536... 29 2.9
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 28 3.8
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 28 5.0
12_01_0574 - 4697425-4698312 27 6.6
05_01_0145 + 950312-950505,950998-951482,951532-951913,952127-95... 27 6.6
04_01_0556 - 7156851-7157096,7157288-7157530,7158112-7158153,715... 27 6.6
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 27 6.6
01_04_0068 + 15693131-15693533,15693604-15693803,15693879-156941... 27 6.6
05_07_0340 + 29389314-29389627,29389966-29390112,29390654-293907... 27 8.8
>07_03_0061 +
12972944-12973054,12974509-12974536,12974701-12974870,
12975878-12976043,12976122-12976425,12977155-12977350,
12977464-12977622,12978311-12978371,12978904-12978967,
12979099-12979346,12980039-12980250,12980344-12980456,
12980547-12980623,12980710-12980873,12981493-12981564,
12981565-12981760,12981813-12981854,12982358-12982440,
12982534-12982671,12982942-12983124,12983216-12983263
Length = 944
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Frame = +1
Query: 94 KSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNS 273
K ++ S+ + +K++ +AV +S L + H+ D K+ Y+ L+++D+ + N
Sbjct: 448 KVEAALESSKGGTMTVKVKGRSAVHESSGLQDTGHILEDG-KSIYNTTLNMSDLTREDNG 506
Query: 274 FYKLQILKHNKENRYWLFRSWGRIGT-TIGGSKVEKMKDLDNALDRFQALYEEKTEN--- 441
+ ++FR WGR+G IGG+K+E+M + +A+ F+ L+ EKT N
Sbjct: 507 ------------SDCYVFRKWGRVGNEKIGGTKLEEMSKI-HAIQEFRRLFLEKTGNPWE 553
Query: 442 RWKDRNNFVKIAGRYFPLEIDY 507
W+ + NF K G+++PL+IDY
Sbjct: 554 AWEQKTNFQKQPGKFYPLDIDY 575
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 226 YSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVE-KMKDLDNAL 402
Y ++ +V N FY +Q L+ + + ++ WGR+G G K+ + A+
Sbjct: 195 YDATMNQTNVGDNNNKFYIIQALESDAGGSFMVYNRWGRVGAR-GQDKLHGPFSSREQAI 253
Query: 403 DRFQALYEEKTENRWKDRNNFVKIAGRYFPLEIDY 507
F+ + KT N W DR +F A +Y LE+DY
Sbjct: 254 YEFEGKFHGKTNNHWSDRKSFECYARKYTWLEMDY 288
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 33.9 bits (74), Expect = 0.076
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 226 YSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGT 351
Y ++ +V N FY +Q L+ + + ++ WGR+GT
Sbjct: 157 YDATMNQTNVGGNNNKFYIIQALESDAGGNFMVYSRWGRVGT 198
>05_01_0265 +
2037518-2037608,2038101-2038348,2038425-2038551,
2038671-2038944,2038984-2039025,2039026-2039158,
2039256-2039342,2039631-2039762
Length = 377
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3
Query: 384 FHLLDFTAADRCADPTPRTEQPVSV 310
FH L + A R ADPTPR QPV V
Sbjct: 26 FHSLQGSDAYRTADPTPRGPQPVKV 50
>01_06_1462 +
37530509-37530874,37531012-37531099,37531352-37531484,
37531567-37532326
Length = 448
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 190 ECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNK 306
+C++ +R K+TY + L L++VV + + L +H K
Sbjct: 131 QCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRK 169
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 82 KSIPKSKSMYVKSEKSAVKLKIRDGN---AVDPASELDEECHVY 204
K P+ +VK EK+ L + GN AV A E+D++ H Y
Sbjct: 634 KGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWY 677
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 82 KSIPKSKSMYVKSEKSAVKLKIRDGN---AVDPASELDEECHVY 204
K P+ +VK EK+ L + GN AV A E+D++ H Y
Sbjct: 634 KGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWY 677
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 82 KSIPKSKSMYVKSEKSAVKLKIRDGN---AVDPASELDEECHVY 204
K P+ +VK EK+ L + GN AV A E+D++ H Y
Sbjct: 634 KGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWY 677
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 495 QREVSPRNLDKVIPVFPTVLSFFFVQRL 412
+R+ PR+ +K IP+ P+V +FF V +L
Sbjct: 644 KRQFKPRSPEKKIPIDPSVRNFFRVPQL 671
>08_01_1056 +
10752363-10752503,10752711-10752771,10753483-10753620,
10754667-10754883,10755760-10755861,10756030-10756133,
10756383-10756483,10756563-10756607,10756724-10756855
Length = 346
Score = 28.7 bits (61), Expect = 2.9
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Frame = +1
Query: 10 MKEYNIADWGIDPASKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIR------DG----- 156
MKEYN A D + + I D S+P+S ++ SA++ KI D
Sbjct: 123 MKEYNEASRLADDINSM---IADRGSLPQSGPEIIR-HTSAIRRKITILCTRLDSLEALL 178
Query: 157 NAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSW 336
+ + P S D+E H D S +A N + +L NK+ + R
Sbjct: 179 SKIPPKSLSDKELHKRQDTLSNLKSKTKQMATSFNMSNFANREDLLGQNKKAADDMSRVA 238
Query: 337 GRIGTTIGGSKVEKMKDLDNALDRFQ 414
G I G + + MK+ D L++ +
Sbjct: 239 GLDNQGIVGLQRQIMKEQDEGLEKLE 264
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 184 DEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSW 336
+E+ H+ T R + +LSL ++ Q YKL+I HN + F SW
Sbjct: 1728 EEQAHIQTLRGRIL-ETILSLRFLIFQYGIVYKLKIASHNTSLAVYGF-SW 1776
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 495 QREVSPRNLDKVIPVFPTVLSFF 427
+R+ PR L+K IP+ P+V +FF
Sbjct: 255 KRQFKPRCLEKKIPIDPSVRNFF 277
>12_01_0574 - 4697425-4698312
Length = 295
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -3
Query: 357 DRCADPTPRTEQPVSVLFIMFQDLQFVERVLLSDNISEREHDRVRCFVAV 208
DR A P P T + L QDL +VL +ER D RC++AV
Sbjct: 100 DRRA-PAPATTAATAGLRGRLQDLTAGVQVLRRQVSAERRGDAARCYLAV 148
>05_01_0145 +
950312-950505,950998-951482,951532-951913,952127-952229
Length = 387
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 403 DRFQALYEEKTENRWKDRNNFVK 471
DRF AL++E+ + WKD +++
Sbjct: 332 DRFAALFQERPKWEWKDLQPYIR 354
>04_01_0556 -
7156851-7157096,7157288-7157530,7158112-7158153,
7158324-7158425,7159209-7159342,7161071-7161131,
7161192-7161284,7161557-7161639,7161984-7162239
Length = 419
Score = 27.5 bits (58), Expect = 6.6
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 223 TYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEKMKDLDNAL 402
+YS+ + V N+ K + K W RSW GTTI + + + D
Sbjct: 210 SYSISVHRPFHVKHPNASKKYMVACIGKSLTMWELRSWRPYGTTINLMRHKWARPCDVGA 269
Query: 403 DRFQALYEEKTENRWKDRNNFVK 471
RF + T N + NN +K
Sbjct: 270 RRFGFM----TSNMAESFNNMLK 288
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 230 RSCSRSLMLSLKRTLSTNCRS*NIIKRTDTG--CSVRGVG 343
RS + ++L+ RT++ NC S +++ T+TG C + +G
Sbjct: 984 RSLAADVLLAGLRTITKNCYSAILLEATETGQLCMLHDIG 1023
>01_04_0068 +
15693131-15693533,15693604-15693803,15693879-15694162,
15694251-15694428
Length = 354
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -3
Query: 495 QREVSPRNLDKVIPVFPTVLSFF 427
+R++ PR+ +K IP+ P+V +FF
Sbjct: 138 KRQLKPRSPEKKIPIDPSVKNFF 160
>05_07_0340 +
29389314-29389627,29389966-29390112,29390654-29390789,
29391098-29391199,29391801-29391920,29392033-29392113,
29392578-29392918,29393069-29393314,29394195-29394519,
29395123-29395356,29395437-29395691
Length = 766
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 370 VEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIAG 480
VEK K L N LD +Q YE R + F+ G
Sbjct: 245 VEKKKKLQNWLDYYQLKYERNPSKRPTTKTGFLGCFG 281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,542,359
Number of Sequences: 37544
Number of extensions: 225295
Number of successful extensions: 778
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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