Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31208
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D13806-1|BAA02964.1|  994|Drosophila melanogaster poly(ADP-ribos...   160   1e-39
BT015238-1|AAT94467.1|  994|Drosophila melanogaster RE04933p pro...   160   1e-39
AY118947-1|AAM50807.1|  557|Drosophila melanogaster LD31274p pro...   160   1e-39
AF051548-1|AAC24518.1|  994|Drosophila melanogaster poly(ADP-rib...   160   1e-39
AF533701-1|AAM93435.1|  613|Drosophila melanogaster PARP-E prote...   132   3e-31
AE014298-959|AAF46203.1| 1123|Drosophila melanogaster CG4536-PA ...    29   3.7  
BT023192-1|AAY55608.1|   78|Drosophila melanogaster IP03162p pro...    28   6.4  
AY069325-1|AAL39470.1|  391|Drosophila melanogaster LD04449p pro...    28   6.4  
AE013599-1399|AAF58575.2|  391|Drosophila melanogaster CG12367-P...    28   6.4  
BT022301-1|AAY54717.1|  169|Drosophila melanogaster IP04634p pro...    28   8.4  
AE014134-435|AAF51234.1|  147|Drosophila melanogaster CG15394-PA...    28   8.4  

>D13806-1|BAA02964.1|  994|Drosophila melanogaster poly(ADP-ribose)
           polymerase protein.
          Length = 994

 Score =  160 bits (388), Expect = 1e-39
 Identities = 76/161 (47%), Positives = 107/161 (66%)
 Frame = +1

Query: 25  IADWGIDPASKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVY 204
           I  WG DP S++P++    KS+  S S+Y KS   +   K++DG AVDP S L++  HVY
Sbjct: 473 ICSWGTDPKSRIPKETT--KSL-NSNSIYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVY 529

Query: 205 TDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEKMK 384
            D     YSVVL L D+   KNS+YK+Q+LK +K+ +YW+FRSWGRIGT IG SK+E+  
Sbjct: 530 VDS-NNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFD 588

Query: 385 DLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEIDY 507
             ++A   F+ +Y +KT N ++ R+NFVK  GR +P+EI Y
Sbjct: 589 TSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQY 629


>BT015238-1|AAT94467.1|  994|Drosophila melanogaster RE04933p
           protein.
          Length = 994

 Score =  160 bits (388), Expect = 1e-39
 Identities = 76/161 (47%), Positives = 107/161 (66%)
 Frame = +1

Query: 25  IADWGIDPASKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVY 204
           I  WG DP S++P++    KS+  S S+Y KS   +   K++DG AVDP S L++  HVY
Sbjct: 473 ICSWGTDPKSRIPKETT--KSL-NSNSIYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVY 529

Query: 205 TDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEKMK 384
            D     YSVVL L D+   KNS+YK+Q+LK +K+ +YW+FRSWGRIGT IG SK+E+  
Sbjct: 530 VDS-NNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFD 588

Query: 385 DLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEIDY 507
             ++A   F+ +Y +KT N ++ R+NFVK  GR +P+EI Y
Sbjct: 589 TSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQY 629


>AY118947-1|AAM50807.1|  557|Drosophila melanogaster LD31274p
           protein.
          Length = 557

 Score =  160 bits (388), Expect = 1e-39
 Identities = 76/161 (47%), Positives = 107/161 (66%)
 Frame = +1

Query: 25  IADWGIDPASKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVY 204
           I  WG DP S++P++    KS+  S S+Y KS   +   K++DG AVDP S L++  HVY
Sbjct: 36  ICSWGTDPKSRIPKETT--KSL-NSNSIYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVY 92

Query: 205 TDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEKMK 384
            D     YSVVL L D+   KNS+YK+Q+LK +K+ +YW+FRSWGRIGT IG SK+E+  
Sbjct: 93  VDS-NNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFD 151

Query: 385 DLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEIDY 507
             ++A   F+ +Y +KT N ++ R+NFVK  GR +P+EI Y
Sbjct: 152 TSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQY 192


>AF051548-1|AAC24518.1|  994|Drosophila melanogaster
           poly(ADP-ribose) polymerase protein.
          Length = 994

 Score =  160 bits (388), Expect = 1e-39
 Identities = 76/161 (47%), Positives = 107/161 (66%)
 Frame = +1

Query: 25  IADWGIDPASKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVY 204
           I  WG DP S++P++    KS+  S S+Y KS   +   K++DG AVDP S L++  HVY
Sbjct: 473 ICSWGTDPKSRIPKETT--KSL-NSNSIYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVY 529

Query: 205 TDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEKMK 384
            D     YSVVL L D+   KNS+YK+Q+LK +K+ +YW+FRSWGRIGT IG SK+E+  
Sbjct: 530 VDS-NNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFD 588

Query: 385 DLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEIDY 507
             ++A   F+ +Y +KT N ++ R+NFVK  GR +P+EI Y
Sbjct: 589 TSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQY 629


>AF533701-1|AAM93435.1|  613|Drosophila melanogaster PARP-E protein
           protein.
          Length = 613

 Score =  132 bits (319), Expect = 3e-31
 Identities = 64/137 (46%), Positives = 90/137 (65%)
 Frame = +1

Query: 25  IADWGIDPASKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVY 204
           I  WG DP S++P++    KS+  S S+Y KS   +   K++DG AVDP S L++  HVY
Sbjct: 473 ICSWGTDPKSRIPKETT--KSL-NSNSIYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVY 529

Query: 205 TDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEKMK 384
            D     YSVVL L D+   KNS+YK+Q+LK +K+ +YW+FRSWGRIGT IG SK+E+  
Sbjct: 530 VDS-NNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFD 588

Query: 385 DLDNALDRFQALYEEKT 435
             ++A   F+ +Y +KT
Sbjct: 589 TSESAKRNFKEIYADKT 605


>AE014298-959|AAF46203.1| 1123|Drosophila melanogaster CG4536-PA
           protein.
          Length = 1123

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 314 DTGCSVRGVGSAQRSAAVKSRR*KISITLWTDSKRCTKKKLRTVGKTGITLSRL 475
           D+G  VRGV   +  +  ++++ K +++ W    R T   L+  G TG  + RL
Sbjct: 704 DSGFEVRGVMVIKSKSKTRAKQRKGAVSNWKRVGRVTLTALKKRGMTGEEMRRL 757


>BT023192-1|AAY55608.1|   78|Drosophila melanogaster IP03162p
           protein.
          Length = 78

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 334 TNGTTSICSLYYVSRSAVCRKSSFERQHQRARARPSTLFC 215
           T GTTS    +  + + +CR+      H+R R+ PS L C
Sbjct: 2   TKGTTSFGKRHNKTHT-ICRRCGNSSYHRRNRSAPSRLSC 40


>AY069325-1|AAL39470.1|  391|Drosophila melanogaster LD04449p
           protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 103 SMYVKSEKSAVKLKIRDGNAVDPASEL-DEECHVYTDRYKTTYSVVLS 243
           S Y++S  S +K++I  GN  D + EL D +  +  +  +  Y  VL+
Sbjct: 94  SDYIRSRASPLKVQILQGNVADSSEELRDTDAVIAIELIEHVYDDVLA 141


>AE013599-1399|AAF58575.2|  391|Drosophila melanogaster CG12367-PA
           protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 103 SMYVKSEKSAVKLKIRDGNAVDPASEL-DEECHVYTDRYKTTYSVVLS 243
           S Y++S  S +K++I  GN  D + EL D +  +  +  +  Y  VL+
Sbjct: 94  SDYIRSRASPLKVQILQGNVADSSEELRDTDAVIAIELIEHVYDDVLA 141


>BT022301-1|AAY54717.1|  169|Drosophila melanogaster IP04634p
           protein.
          Length = 169

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +1

Query: 43  DPASKLPQDIIDGKSIPKS--KSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRY 216
           DP   L + +++  ++P+       V+S K+ +  ++   +A+D    L+  C+ Y DR+
Sbjct: 101 DPLQSLKKALLEELNLPELVVSLKVVRSGKNRLVFELP--SALDALFTLNSFCNRYRDRH 158

Query: 217 KTTYSVV 237
             TY ++
Sbjct: 159 DLTYEII 165


>AE014134-435|AAF51234.1|  147|Drosophila melanogaster CG15394-PA
           protein.
          Length = 147

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +1

Query: 43  DPASKLPQDIIDGKSIPKS--KSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRY 216
           DP   L + +++  ++P+       V+S K+ +  ++   +A+D    L+  C+ Y DR+
Sbjct: 79  DPLQSLKKALLEELNLPELVVSLKVVRSGKNRLVFELP--SALDALFTLNSFCNRYRDRH 136

Query: 217 KTTYSVV 237
             TY ++
Sbjct: 137 DLTYEII 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.134    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,691,350
Number of Sequences: 53049
Number of extensions: 374330
Number of successful extensions: 1303
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)