Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31208
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 108 2e-24
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 108 2e-24
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 57 6e-09
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 57 6e-09
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 57 6e-09
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 40 0.001
U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical pr... 33 0.091
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 1.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 1.5
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 29 1.5
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 1.5
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 29 2.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.6
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 29 2.6
Z81581-8|CAB04661.2| 244|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 27 6.0
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 6.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 6.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 6.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 6.0
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 27 6.0
AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical... 27 6.0
AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical... 27 6.0
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 27 6.0
AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H... 27 6.0
AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H... 27 6.0
Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z83105-4|CAB05486.1| 280|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical p... 27 7.9
Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H... 27 7.9
AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine re... 27 7.9
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 108 bits (260), Expect = 2e-24
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +1
Query: 145 IRDGNAVDPASELDEECHVYTDRYK-TTYSVVLSLADVVAQKNSFYKLQILKHNKENRYW 321
I+ G VD L + CHV+ + + Y LS D+ KNS+YK+Q+LK ++ Y+
Sbjct: 449 IKKGTVVDAKFALADRCHVFKNEIDGSLYQATLSFTDLTQNKNSYYKIQLLKDDQRENYY 508
Query: 322 LFRSWGRIGTTIGGSKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEI 501
+FRSWGR+GT +GG+K E + + A+ +FQ ++ EKT+N W R +F K+ G + +E
Sbjct: 509 VFRSWGRVGTEVGGNKHESYSNSNEAILKFQDVFHEKTKNDWIYRKHFRKMPGMFSYVET 568
Query: 502 DY 507
DY
Sbjct: 569 DY 570
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 108 bits (260), Expect = 2e-24
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +1
Query: 145 IRDGNAVDPASELDEECHVYTDRYK-TTYSVVLSLADVVAQKNSFYKLQILKHNKENRYW 321
I+ G VD L + CHV+ + + Y LS D+ KNS+YK+Q+LK ++ Y+
Sbjct: 449 IKKGTVVDAKFALADRCHVFKNEIDGSLYQATLSFTDLTQNKNSYYKIQLLKDDQRENYY 508
Query: 322 LFRSWGRIGTTIGGSKVEKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEI 501
+FRSWGR+GT +GG+K E + + A+ +FQ ++ EKT+N W R +F K+ G + +E
Sbjct: 509 VFRSWGRVGTEVGGNKHESYSNSNEAILKFQDVFHEKTKNDWIYRKHFRKMPGMFSYVET 568
Query: 502 DY 507
DY
Sbjct: 569 DY 570
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 57.2 bits (132), Expect = 6e-09
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +1
Query: 202 YTDRYKTTYSVVLSLADVVAQK---NSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKV 372
+ D + + V+++ D++ + ++FY++QI+K + LF +WGRIG+ +G +
Sbjct: 1754 FCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMGEFQT 1813
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEID 504
L+ A F+++++ K+ N W NF + +Y +E D
Sbjct: 1814 TPFNSLELAAKEFKSIFKSKSGNEWAPLANFRDMPKKYRLVETD 1857
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 57.2 bits (132), Expect = 6e-09
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +1
Query: 202 YTDRYKTTYSVVLSLADVVAQK---NSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKV 372
+ D + + V+++ D++ + ++FY++QI+K + LF +WGRIG+ +G +
Sbjct: 1792 FCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMGEFQT 1851
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEID 504
L+ A F+++++ K+ N W NF + +Y +E D
Sbjct: 1852 TPFNSLELAAKEFKSIFKSKSGNEWAPLANFRDMPKKYRLVETD 1895
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 57.2 bits (132), Expect = 6e-09
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +1
Query: 202 YTDRYKTTYSVVLSLADVVAQK---NSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKV 372
+ D + + V+++ D++ + ++FY++QI+K + LF +WGRIG+ +G +
Sbjct: 1754 FCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMGEFQT 1813
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEID 504
L+ A F+++++ K+ N W NF + +Y +E D
Sbjct: 1814 TPFNSLELAAKEFKSIFKSKSGNEWAPLANFRDMPKKYRLVETD 1857
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = +1
Query: 199 VYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEK 378
+ D Y V L ++ N FY +++L + L GRIG G ++++
Sbjct: 3 IINDENGRGYKVHLCKTNIAQNNNKFYDMELLDEGGDFIVKLIN--GRIGYR-GVTQLKD 59
Query: 379 MKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEI 501
DLD A F++ + EKT W++R++ + +Y +E+
Sbjct: 60 FDDLDRAKKFFESKFYEKTHLHWEERDD-EPVPNKYAVVEL 99
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = +1
Query: 199 VYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKHNKENRYWLFRSWGRIGTTIGGSKVEK 378
+ D Y V L ++ N FY +++L + L GRIG G ++++
Sbjct: 3 IINDENGRGYKVHLCKTNIAQNNNKFYDMELLDEGGDFIVKLIN--GRIGYR-GVTQLKD 59
Query: 379 MKDLDNALDRFQALYEEKTENRWKDRNNFVKIAGRYFPLEI 501
DLD A F++ + EKT W++R++ + +Y +E+
Sbjct: 60 FDDLDRAKKFFESKFYEKTHLHWEERDD-EPVPNKYAVVEL 99
>U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical
protein C18F10.2 protein.
Length = 711
Score = 33.5 bits (73), Expect = 0.091
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 455 LSFQRFSVFSSYSAWNLSKALSRSFIFSTLLPPI 354
L FQ F +F + SA+N+S +RSF+F +L P+
Sbjct: 3 LFFQHFLLFYAASAYNVSVNTNRSFLFGDVLEPL 36
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 173 RRNWTRSATCTRTATKQRTRSCSRSLMLSLKRTLSTNCR 289
RR+W+RS + +R+ + R RS SRS +R +N R
Sbjct: 397 RRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSR 435
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 ISPIGVLILPLSCPKILLMENRYLRVKACMXXXXXXXXXXXXATATLWTRRRNW-TRSAT 199
++P G +I LSC + + + W + W T + T
Sbjct: 2770 VTPDGTVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTET 2829
Query: 200 CTRTATKQRTRSCSR 244
C T+QR RSC++
Sbjct: 2830 CGSCGTQQRFRSCNK 2844
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 ISPIGVLILPLSCPKILLMENRYLRVKACMXXXXXXXXXXXXATATLWTRRRNW-TRSAT 199
++P G +I LSC + + + W + W T + T
Sbjct: 2770 VTPDGTVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTET 2829
Query: 200 CTRTATKQRTRSCSR 244
C T+QR RSC++
Sbjct: 2830 CGSCGTQQRFRSCNK 2844
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 ISPIGVLILPLSCPKILLMENRYLRVKACMXXXXXXXXXXXXATATLWTRRRNW-TRSAT 199
++P G +I LSC + + + W + W T + T
Sbjct: 2770 VTPDGTVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTET 2829
Query: 200 CTRTATKQRTRSCSR 244
C T+QR RSC++
Sbjct: 2830 CGSCGTQQRFRSCNK 2844
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 ISPIGVLILPLSCPKILLMENRYLRVKACMXXXXXXXXXXXXATATLWTRRRNW-TRSAT 199
++P G +I LSC + + + W + W T + T
Sbjct: 2770 VTPDGTVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTET 2829
Query: 200 CTRTATKQRTRSCSR 244
C T+QR RSC++
Sbjct: 2830 CGSCGTQQRFRSCNK 2844
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 366 TAADRCAD-PTPRTEQPVSVLFIMFQDLQFVERVLLSDNISEREHDRVRCFVAVRVHVAL 190
T +D C + P P + P I+F DL ++ + + H+ + CF + ++ L
Sbjct: 817 TTSDNCEEIPDPSSIDPNKKTLIIFDDLMLEKQNKIEQYYTRGRHNNIDCFYISQNYIKL 876
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 366 TAADRCAD-PTPRTEQPVSVLFIMFQDLQFVERVLLSDNISEREHDRVRCFVAVRVHVAL 190
T ++ C D P P + P I+F DL ++ + + H+ + CF + ++ L
Sbjct: 781 TTSENCEDIPDPSSIDPNKKTLIIFDDLMLEKQNKIEQYYTRGRHNNIDCFYISQNYIKL 840
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 121 EKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKH 300
E+S +K + +G+++ ELDE ++ +D + TYS+V + + N + + K
Sbjct: 726 ERSPMKKENTNGSSMH--DELDENDYLKSDIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 301 NKENRYWL 324
+N WL
Sbjct: 784 LYKNSSWL 791
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 64 QDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTT 225
+D+ + + +PK K++ K+EKS + + N + PA + + TD+ K T
Sbjct: 12855 KDVSEIEEVPKKKTIKKKTEKSDSSIS-QKSNVLKPADDDKSKSDDVTDKSKKT 12907
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 64 QDIIDGKSIPKSKSMYVKSEKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTT 225
+D+ + + +PK K++ K+EKS + + N + PA + + TD+ K T
Sbjct: 12855 KDVSEIEEVPKKKTIKKKTEKSDSSIS-QKSNVLKPADDDKSKSDDVTDKSKKT 12907
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 121 EKSAVKLKIRDGNAVDPASELDEECHVYTDRYKTTYSVVLSLADVVAQKNSFYKLQILKH 300
E+S +K + +G+++ ELDE ++ +D + TYS+V + + N + + K
Sbjct: 726 ERSPMKKENTNGSSMH--DELDENDYLKSDIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 301 NKENRYWL 324
+N WL
Sbjct: 784 LYKNSSWL 791
>Z81581-8|CAB04661.2| 244|Caenorhabditis elegans Hypothetical
protein T02E1.6 protein.
Length = 244
Score = 27.9 bits (59), Expect = 4.5
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 52 SKLPQDIIDGKSIPKSKSMYVKSEKSAVKLKIRDG---NAVDPASELDEECHVYT-DRYK 219
S P + G S PKS+S+ VK E+ K R+G N S+L + + R+K
Sbjct: 7 SSKPISVTKGLSPPKSRSLKVKREREKSPTKGRNGSMQNKPTDTSDLAIDATQWEFSRFK 66
Query: 220 TTYSVVLSLADVVAQKNS 273
V D+V KN+
Sbjct: 67 DEVGTVFEDPDIV-MKNT 83
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 118 SEKSAVKLKIRDGNAVDPASELDEECH-VYTDRYKTTYSVVLSLADVVAQKNSFYKLQIL 294
++K + K+ + V S + H V++ YKTT V +L + +N+ LQI
Sbjct: 7 NDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIW 66
Query: 295 KHNKENRY 318
+ ++RY
Sbjct: 67 DISGQDRY 74
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDR 456
EK +DLD+ L + + EEK E+R K++
Sbjct: 924 EKSRDLDDKLRKMELTDEEKEEDRKKEQ 951
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDR 456
EK +DLD+ L + + EEK E+R K++
Sbjct: 924 EKSRDLDDKLRKMELTDEEKEEDRKKEQ 951
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDR 456
EK +DLD+ L + + EEK E+R K++
Sbjct: 684 EKSRDLDDKLRKMELTDEEKEEDRKKEQ 711
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 373 EKMKDLDNALDRFQALYEEKTENRWKDR 456
EK +DLD+ L + + EEK E+R K++
Sbjct: 924 EKSRDLDDKLRKMELTDEEKEEDRKKEQ 951
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 118 SEKSAVKLKIRDGNAVDPASELDEECH-VYTDRYKTTYSVVLSLADVVAQKNSFYKLQIL 294
++K + K+ + V S + H V++ YKTT V +L + +N+ LQI
Sbjct: 7 NDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIW 66
Query: 295 KHNKENRY 318
+ ++RY
Sbjct: 67 DISGQDRY 74
>AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical
protein Y18D10A.6b protein.
Length = 655
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 425 SYSA--WNLSKALSRSFIFSTLLPPIVVPIRPHERNNQYLFS 306
SYS W+ +ALS F LLPPI+ + N Y FS
Sbjct: 129 SYSRRDWSEIEALSPDVFFLVLLPPIIFE-NAYNLNKGYFFS 169
>AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical
protein Y18D10A.6a protein.
Length = 681
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 425 SYSA--WNLSKALSRSFIFSTLLPPIVVPIRPHERNNQYLFS 306
SYS W+ +ALS F LLPPI+ + N Y FS
Sbjct: 155 SYSRRDWSEIEALSPDVFFLVLLPPIIFE-NAYNLNKGYFFS 195
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 440 FSVFSSYSAWNLSKALSRSFIFSTLLPPIVVPIRPHERNNQYLFSLL--CF 294
F +F YSA + ++ + + P I + H R +LFS+L CF
Sbjct: 216 FPIFGIYSASFILFQVTTLIYYICIAPSITISKDTHHRQKVFLFSILLQCF 266
>AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H
exchanger isoform 8b protein.
Length = 655
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 425 SYSA--WNLSKALSRSFIFSTLLPPIVVPIRPHERNNQYLFS 306
SYS W+ +ALS F LLPPI+ + N Y FS
Sbjct: 129 SYSRRDWSEIEALSPDVFFLVLLPPIIFE-NAYNLNKGYFFS 169
>AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H
exchanger isoform 8a protein.
Length = 681
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 425 SYSA--WNLSKALSRSFIFSTLLPPIVVPIRPHERNNQYLFS 306
SYS W+ +ALS F LLPPI+ + N Y FS
Sbjct: 155 SYSRRDWSEIEALSPDVFFLVLLPPIIFE-NAYNLNKGYFFS 195
>Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 440 FSVFSSYSAWNLSKALSRSFIFSTLLPPIVV 348
F+ F+ Y W + L F LLPPIV+
Sbjct: 20 FAGFTIYELWTVDLFLHPDLFFLYLLPPIVL 50
>Z83105-4|CAB05486.1| 280|Caenorhabditis elegans Hypothetical
protein F14H3.4 protein.
Length = 280
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 EECHVYTDRYKTTYSVVLSLADVVAQKNSFY--KLQILKHNKENRYWLFRSWGRI 345
+EC +Y+T Y VLS QK Y +LQ L+H++ F+ R+
Sbjct: 112 DECETRLKQYRTDYERVLSQRKPSIQKIQQYEAELQQLQHDRRTHEAAFQLLRRV 166
>Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical
protein C27A7.8 protein.
Length = 81
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 164 WTRRRNW-TRSATCTRTATKQRTRSCS 241
W W T S TC T+QRTR+C+
Sbjct: 10 WATWGEWSTCSDTCGNCGTQQRTRTCT 36
>Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 440 FSVFSSYSAWNLSKALSRSFIFSTLLPPIVV 348
F+ F+ Y W + L F LLPPIV+
Sbjct: 20 FAGFTIYELWTVDLFLHPDLFFLYLLPPIVL 50
>AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H
exchanger isoform 1 protein.
Length = 479
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 440 FSVFSSYSAWNLSKALSRSFIFSTLLPPIVV 348
F+ F+ Y W + L F LLPPIV+
Sbjct: 19 FAGFTIYELWTVDLFLHPDLFFLYLLPPIVL 49
>AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine
receptor, class z protein20 protein.
Length = 326
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 477 RNLDKVIPVFPTVLSFFFVQRLESV----QSVIEIFHLLDFT 364
R LDK IP+FP V F+ V R+ + + IF +L +T
Sbjct: 52 RVLDKEIPIFPFVNHFYSVIRMVQIIFLCMCTVIIFIILAYT 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,830,485
Number of Sequences: 27780
Number of extensions: 201843
Number of successful extensions: 831
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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