Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31206
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 33 0.29
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 31 0.89
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 31 0.89
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 31 1.2
SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3) 30 1.5
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 30 2.0
SB_27989| Best HMM Match : Involucrin2 (HMM E-Value=1.2) 30 2.0
SB_18944| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 30 2.0
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 2.7
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 2.7
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 29 3.6
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 3.6
SB_29515| Best HMM Match : TolA (HMM E-Value=0.031) 24 4.2
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 29 4.7
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 29 4.7
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 4.7
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 28 6.2
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 28 6.2
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 6.2
SB_49859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 28 6.2
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 28 6.2
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 28 8.3
SB_58197| Best HMM Match : Ribosomal_L5_C (HMM E-Value=3) 28 8.3
SB_48507| Best HMM Match : TolA (HMM E-Value=1) 28 8.3
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.095
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 518 IEEKRQRLEEAEKKRQAMLQAMKDA 592
+EE+R+RLE EK+RQA QAM++A
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEA 343
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
++E + E KR++++R +E+ K+ E RKQR +EE + K E++ KRK
Sbjct: 449 EEEERREEEERKREEEERKQREEEEKKREEEERKQREEEERKQKEK-EEEKKRK 501
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/43 (27%), Positives = 29/43 (67%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+R+++++ +E+ K+ E RKQ+ KEE++ ++ E++ K +
Sbjct: 468 QREEEEKKREEEERKQREEEERKQKEKEEEKKRKEEERKHKEE 510
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 521 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFPSKRRA 631
EE+RQ+ EEA K+R+ L A K++SK+ SK R+
Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNKRKSKERS 1379
>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 251 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAK 415
PA ++EGEG+P+ +R+ Q + ++Q K + +K ++ DE ++ + +
Sbjct: 56 PANEEEGEGEPKPKRRKAQPSAPKEKQTKSRKRDKKKDKSALTDESDEEVDSEIR 110
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 290 IKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
+KR++Q + ++ ++ E ++E KQR K+ E +++ +Q RK+
Sbjct: 145 LKRREQWQKEMKQKKDEQVDEREKQREKQRQE--KIMREQMSRKI 187
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQD---QKRSD-LDEQLKEYINEWRKQRAKEEDELKRLIEKQ 409
++E +G + ++Q +KR++ L+++L + NE K +AK DE++ LIE+Q
Sbjct: 896 EKEADGQRKVHEKQQNSYEKRNEGLEKKLMDEANERTKIKAKYNDEIQTLIEEQ 949
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/116 (19%), Positives = 49/116 (42%)
Frame = +2
Query: 251 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKVSX 430
P K + + + + Q ++ ++ EQ+ + E RK+ ++E + K+L E + ++++
Sbjct: 116 PVAKPKPKSKKQLLAEQRRRAKEM-EQIAMELEEKRKEEEEKEKQRKQL-EVEKQKRLEE 173
Query: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASK 598
+ EE+R+R +E EKKR+ + K K
Sbjct: 174 ERIRSQNEERKRREREQKEREKQQKLDMEKEERRRRQQEEEKKRREEEEKRKKVEK 229
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQ 409
KQE E ++ + Q+R + +EQ K+ E RK+R KEE + + +EKQ
Sbjct: 621 KQEEEERKRKMQMELQRRKEEEEQ-KKRDEEERKRREKEEKDRQFQLEKQ 669
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+ +++KR +E+ K + + QR KEE+E K+ E++ KR+
Sbjct: 614 EEEERKRKQEEEERKRKM-QMELQRRKEEEEQKKRDEEERKRR 655
>SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/55 (29%), Positives = 37/55 (67%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
KQE + + + ++++QK+ + +EQ K+ + E +KQ +EE K+ ++++ K++V
Sbjct: 149 KQEVQEEQKQEEQEEQKQEEQEEQ-KQEVQEEQKQEVQEEQ--KQEVQEEQKQEV 200
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/57 (24%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINE--WRKQRAKEEDELKRLIEKQAKRKV 424
KQE + + + +++QK+ + +EQ +E + +Q+ +E++E K+ ++++ K++V
Sbjct: 80 KQEEQEEQKQEVQEEQKQEEQEEQKQEEQKQEVQEEQKQEEQEEQKQEVQEEQKQEV 136
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
K++ + E K+++QK+ +EQ K+ + E +KQ +EE K+ ++++ K++V
Sbjct: 24 KEQKQEVQEEQKQEEQKQEVQEEQ-KQEVQEEQKQEVQEEQ--KQKVQEEQKQEV 75
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/54 (25%), Positives = 34/54 (62%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
KQE + + + ++++QK+ +EQ +E E +++ K+E + ++ E+Q ++K
Sbjct: 72 KQEVQKEQKQEEQEEQKQEVQEEQKQEEQEEQKQEEQKQEVQEEQKQEEQEEQK 125
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/55 (25%), Positives = 36/55 (65%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
KQE + + + +++QK+ + +EQ +E E +Q+ + ++E K+ ++++ K++V
Sbjct: 141 KQEVQEEQKQEVQEEQKQEEQEEQKQE---EQEEQKQEVQEEQKQEVQEEQKQEV 192
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQ 409
KQE + + + ++++QK+ +EQ K+ + E +KQ +EE K+ ++KQ
Sbjct: 157 KQEEQEEQKQEEQEEQKQEVQEEQ-KQEVQEEQKQEVQEEQ--KQEVQKQ 203
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Frame = +2
Query: 254 APKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEK--QAKRKVS 427
A KQE E E I + R+D+ E LK Y+ E K++ K E+E+KR+ + K+K
Sbjct: 3334 AAKQEIERLEETINKD---RNDMAE-LKRYLVESEKKKTKLEEEVKRVRRRLENLKQKAI 3389
Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGP 607
IEE R L+ E++R + D+ K P
Sbjct: 3390 ELERQKDDELCEVKGDKVSLEKEQWELREAIEELRATLKGVEEERDRYENELDDSRKQYP 3449
Query: 608 N 610
+
Sbjct: 3450 D 3450
>SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3)
Length = 274
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +2
Query: 290 IKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
+KR++Q + ++ ++ E ++E KQR K E +++ +Q RK+
Sbjct: 149 LKRREQWQKEMKQKKDEQVDEREKQREKHRQE--KIMREQMSRKI 191
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 299 QDQ-KRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
QD+ KR + + KE E R+QRAK E E +R E + +R+
Sbjct: 114 QDKLKREKEEREAKERAEEERRQRAKMEAEQRRQAELEKQRQ 155
>SB_27989| Best HMM Match : Involucrin2 (HMM E-Value=1.2)
Length = 192
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKVSXXXXXXXXXXXXXXX 472
K+ D+ + +E+ E + RK RA E ++ RLIE++ +++V
Sbjct: 9 KKDDESKRKEEEKRLEEMERQRKIRAAEREQ--RLIEEETQKRVEEMVAKRVEEQLAKRK 66
Query: 473 XXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMK 586
++Q LEE EK++Q ++ ++
Sbjct: 67 DEIDKEVMRRVEEAKKIMEQQMLEEFEKRKQEQIEQLR 104
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 278 DPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKR 418
D E +++++KR + E+ ++ R+QR EE+ KR+ E AKR
Sbjct: 11 DDESKRKEEEKRLEEMERQRKIRAAEREQRLIEEETQKRVEEMVAKR 57
>SB_18944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKVSXXXXXXXXXXXXXXX 472
K+ D+ + +E+ E + RK RA E ++ RLIE++ +++V
Sbjct: 19 KKDDESKRKEEEKRLEEMERQRKIRAAEREQ--RLIEEETQKRVEEMVAKRVEEQLAKRK 76
Query: 473 XXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMK 586
++Q LEE EK++Q ++ ++
Sbjct: 77 DEIDKEVMRRVEEAKKIMEQQMLEEFEKRKQEQIEQLR 114
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 278 DPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKR 418
D E +++++KR + E+ ++ R+QR EE+ KR+ E AKR
Sbjct: 21 DDESKRKEEEKRLEEMERQRKIRAAEREQRLIEEETQKRVEEMVAKR 67
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +2
Query: 515 DIEEKRQRLEEAEKKRQAMLQAMKDASKT 601
++EEK++RL+ E+ + ++ +A K+ASK+
Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKS 455
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/47 (29%), Positives = 31/47 (65%)
Frame = +2
Query: 284 EFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
E + ++++RS +E+ + +E RK++ +EE E R+++ + KRK+
Sbjct: 447 EEARLKEERRSKDEEENRRKADEERKRKEQEEAERNRVVQ-EEKRKI 492
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 269 GEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
GE E +R Q++SD EQ++ + + R+ AKE+ E + IE Q +++
Sbjct: 71 GEALEEERQRMLQEKSDWLEQVERQMEQEREVFAKEKAEFQDQIENQIEKE 121
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/43 (25%), Positives = 29/43 (67%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+ + +KR++L+++++ + RK+ + E ELK+ E++ +R+
Sbjct: 217 EEEARKRAELEDKMRRENEKKRKEEERAEAELKKKEEEERQRR 259
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYIN-EWRKQRAKEEDELKRLIEKQAKRK 421
+++++++ + +++ KE + E R++R K+E+ KR E+QA+RK
Sbjct: 287 EKEEKRKLEAEKKEKERVEREQREERRKQEE--KRRAEEQARRK 328
>SB_29515| Best HMM Match : TolA (HMM E-Value=0.031)
Length = 592
Score = 24.2 bits (50), Expect(2) = 4.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = +2
Query: 290 IKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
++R+ ++R + + E + R + E+E+KR E++ K++
Sbjct: 344 VERKRREREEAKRKQLEEAERLERVRLEAEEEMKRREEERRKKR 387
Score = 23.0 bits (47), Expect(2) = 4.2
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 521 EEKRQRLEEAEKKRQAMLQAMKDASK 598
EE+R++ EEAE++R+ + ++ K
Sbjct: 381 EERRKKREEAERERKRKEEEERNREK 406
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 251 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKR 394
P P + E P+ I ++QK+ + + Q E ++++ ++E ELK+
Sbjct: 619 PKPNLKEEKPPQKITSEEQKQKERNRQKHREEMERKREKLQKERELKK 666
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 302 DQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
DQ+ D D +L+ Y + Q+ + ++ KR IEK++ +K
Sbjct: 976 DQQNGDSDGELQSYFPDENYQKKRTVNKKKRHIEKRSIKK 1015
>SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +2
Query: 299 QDQKRSDLDEQLKEYINEWRKQRAKEE----DELKRLIEKQAKRK 421
Q+ +R +++++E +W++++ K+E ++KR +EKQA K
Sbjct: 296 QETERRLGEKEVQELTEKWKRRKRKQEWLKRRKIKRTLEKQAAEK 340
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 515 DIEEKRQRLEEAEKKRQAMLQAMKD 589
D+EEK + LEEA+ + +A+ MKD
Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 254 APKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIE 403
APK + G F+KR +++ +L E++ + IN K+ A+ E LK L++
Sbjct: 261 APKPKSGGKAGFVKRTQRRQREL-EEVADAIN-LAKRPAQPEKPLKFLVK 308
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +2
Query: 317 DLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+L E+ + +NE R+QRA+ E+ ++L +QAK++
Sbjct: 188 ELAEKHESQLNELREQRARLEELQQQLSAEQAKQR 222
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 308 KRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
KRS+ EQL +NE RKQ +D++KR + A R++
Sbjct: 4083 KRSN--EQLNNQVNEQRKQIINLQDQIKRERAELANRQL 4119
>SB_49859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 281 PEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
PE IK + SDL+ ++ + EW +Q ++ D + RL++ K +
Sbjct: 120 PEAIKDEYDDLSDLNGMQQDSLREWEQQFDEKYDLVGRLLKPGEKHQ 166
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 521 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFPSKRRAK 634
EE+RQ+ EEA K+R+ L K T + KRR K
Sbjct: 537 EERRQKREEARKRREEKL--AKKGPTTSTSSSRKRRRK 572
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 IKRQDQKRSDLD----EQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
IK + Q+R D E++++ E K + ++E+ELKRL+E+Q + +
Sbjct: 338 IKEEAQRRILEDRREVEEIEQQAAEQLKGQQEKEEELKRLLERQLEEE 385
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 290 IKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
++ +++ DLD+ K IN + + AK DEL L ++ ++ K
Sbjct: 656 LRDKEEDMEDLDKNSKNEINSLKAKLAKANDELSDLRDELSETK 699
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
KR+ +K ++ Q++E +K++ +EE+ +K +EKQ K K+
Sbjct: 278 KRKREKELEMLRQIEE-----KKRKLEEEERIKEEVEKQKKIKL 316
>SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 296 RQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
R+ ++R E+ ++ + E KQR K+E++ + L E + +RK
Sbjct: 7 REKEEREREIERHRQALLEEEKQRLKDEEDKRNLQEYEVQRK 48
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 518 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFPSKRRAKTSV*AMPS 658
+EE++QRL++ E KR ++ K PN P R + +M S
Sbjct: 24 LEEEKQRLKDEEDKRNLQEYEVQRKQKLSPN-PKSRETLDYIESMTS 69
>SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06)
Length = 337
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 452 RGAFLLRHEKPCAWPASL*GV 390
RGA L R+E PC W A L G+
Sbjct: 69 RGAALQRNEPPCMWIAILNGI 89
>SB_58197| Best HMM Match : Ribosomal_L5_C (HMM E-Value=3)
Length = 582
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 257 PKQEGEGDPEFIKRQDQKRSDLDEQLKEYINE----WRKQRAKEEDEL 388
P QE E DP++I R+D++ + E E +E +RK +AK +L
Sbjct: 20 PSQE-EADPDYIPRKDEEGAQQQENETEADDEEEKFYRKNKAKNWSKL 66
>SB_48507| Best HMM Match : TolA (HMM E-Value=1)
Length = 649
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 251 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYIN---EWRKQRAKEEDELKRLI 400
P P GE +PE I + LDE Y+ + RKQR EEDEL +++
Sbjct: 601 PPPTPHGE-EPEAI----ESLKSLDELELSYLKMKAQARKQRMTEEDELDKIL 648
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
++E E + E + ++++ + +E+ KE E ++ +EE+E + E++ +RK
Sbjct: 212 EEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEEEEEEEKRRRK 265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,232,431
Number of Sequences: 59808
Number of extensions: 314150
Number of successful extensions: 2473
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2449
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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