Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31206
(692 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23930.1 68416.m03006 expressed protein 43 2e-04
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 33 0.14
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.18
At4g13540.1 68417.m02111 expressed protein 32 0.41
At5g10010.1 68418.m01159 expressed protein 31 0.73
At1g06135.1 68414.m00644 expressed protein 31 0.73
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 30 1.3
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 30 1.3
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 30 1.7
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 29 2.2
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 26 2.7
At3g61350.1 68416.m06865 SKP1 interacting partner 4 (SKIP4) almo... 29 2.9
At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger) pr... 29 2.9
At2g29540.1 68415.m03588 DNA-directed RNA polymerase I(A) and II... 29 2.9
At1g03780.2 68414.m00358 targeting protein-related similar to mi... 29 2.9
At5g14390.1 68418.m01681 expressed protein 29 3.9
At4g31880.1 68417.m04531 expressed protein 29 3.9
At2g44200.1 68415.m05500 expressed protein 29 3.9
At1g74870.1 68414.m08677 expressed protein contains similarity t... 29 3.9
At1g02540.1 68414.m00205 hypothetical protein 29 3.9
At5g64910.1 68418.m08165 expressed protein ; expression support... 28 5.1
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 5.1
At3g21465.1 68416.m02707 expressed protein 28 5.1
At1g56660.1 68414.m06516 expressed protein 28 5.1
At5g64290.1 68418.m08076 oxoglutarate/malate translocator, putat... 28 6.8
At4g31570.1 68417.m04483 expressed protein 28 6.8
At3g47720.1 68416.m05199 expressed protein 28 6.8
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 28 6.8
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 6.8
At5g06930.1 68418.m00783 expressed protein 27 8.9
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 27 8.9
At3g28770.1 68416.m03591 expressed protein 27 8.9
At1g42560.1 68414.m04907 seven transmembrane MLO family protein ... 27 8.9
At1g08400.1 68414.m00929 chromosome structural maintenance prote... 27 8.9
>At3g23930.1 68416.m03006 expressed protein
Length = 224
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
K + G IK +D++ + QLKE EWRK+R K +E++RL +K +R+
Sbjct: 21 KDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKERKKLREEVRRLRKKLEERE 74
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 PKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRL-IEKQAKRKV 424
PK E EG +KR + + E+ K+ + E +++ ++++++K + EK+ K+K+
Sbjct: 440 PKSEKEGGETCLKRLIEALKEEKEEAKKKVEEEEEEKQRKKEKVKEIEAEKEKKKKI 496
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/117 (20%), Positives = 50/117 (42%)
Frame = +2
Query: 278 DPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKVSXXXXXXXXXX 457
+ E KR++++ ++ ++ +E + ++R +EE+E KR E++ KR+
Sbjct: 463 EEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEE 522
Query: 458 XXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFPSKRR 628
E +R+R EE E+KR+ ++ + +KRR
Sbjct: 523 REKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRR 579
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/54 (27%), Positives = 34/54 (62%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+++ E + E ++++++R +E K+ E R+++ +EE E KR E++ KR+
Sbjct: 506 RKKREEEAEQARKREEEREKEEEMAKKREEE-RQRKEREEVERKRREEQERKRR 558
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Frame = +2
Query: 293 KRQDQKRSDLDEQ------LKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+R+ + R +LDE+ LK EWRK+R + +E+KRL +K +++
Sbjct: 24 QRRRETRRELDEKERVILALKMAETEWRKERKRLREEVKRLRQKMEEKE 72
>At5g10010.1 68418.m01159 expressed protein
Length = 434
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
++E +GD E + +D K L+E + +E + + KEE E K + + KRK
Sbjct: 56 EEEAKGDQE--EEEDAKPDSLEEDEENQEDEVKAEEVKEEVEKKPVARRGGKRK 107
>At1g06135.1 68414.m00644 expressed protein
Length = 69
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 30 PLYTSGPPGCRNSARGSPRLH 92
P+ SGP GC N RG+PR H
Sbjct: 48 PVSGSGPNGCTNIPRGTPRCH 68
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor
3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+++DQ+R L+ + +E + Q+ EE E KRL + A+R+
Sbjct: 574 RKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAELAERR 616
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/38 (23%), Positives = 26/38 (68%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEK 406
++ +Q+ S ++ Q K ++W +Q+ EE+++ +L+++
Sbjct: 257 RKYEQQYSQIESQTKTEKSKWEEQKKNEEEDMDKLLKE 294
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +2
Query: 290 IKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKR 418
+++QD R +EQ+++ + ++R KEE+ L R +++ +R
Sbjct: 350 LEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQREEER 392
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 257 PKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEW 355
PK+E EG+ E + + +K +++KE +EW
Sbjct: 232 PKKENEGEVEEVDEEKEKDGKKKKKIKEVSHEW 264
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 25.8 bits (54), Expect(2) = 2.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 248 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA-KEEDELKRLIEKQAKRK 421
T PK + E IKR + + E+ ++ E K++A KE ++K+ E + K+K
Sbjct: 436 TLMPKSDEEDADICIKRLVKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKK 494
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 515 DIEEKRQRLEEAEKKRQ 565
+ EEK+++ EE EKK +
Sbjct: 488 EAEEKKKKTEEDEKKEK 504
>At3g61350.1 68416.m06865 SKP1 interacting partner 4 (SKIP4) almost
idential to SKP1 interacting partner 4 GI:10716953 from
[Arabidopsis thaliana], 42 aa extension at N-terminal;
contains Pfam profiles PF01344: Kelch motif, PF00646:
F-box domain
Length = 358
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 203 IPPRQTCWLFIECRTGRSRSLSHSALVLGPAAQRRWNV-EPRRPSCR 66
+PP T + C T + ++ L L P A+R W++ +P +C+
Sbjct: 154 VPPLSTKRCYFACETLDGKIIAIGGLGLNPNAKRTWDIYDPLTRTCK 200
>At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger)
protein-related contains weak hit to Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger); weak
similarity to RING finger protein 8 (Swiss-Prot:O76064)
[Homo sapiens]
Length = 738
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +2
Query: 260 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+ E + E IK ++ + + ++ KEY +WR+++ +E L ++ E+Q ++
Sbjct: 539 QDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKE 592
>At2g29540.1 68415.m03588 DNA-directed RNA polymerase I(A) and
III(C) 14 kDa subunit (RPAC14) identical to RNA
polymerase I(A) and III(C) 14 kDa subunit (AtRPAC14)
[Arabidopsis thaliana] GI:1184686
Length = 122
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 251 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKR 394
PA + + E ++ RS D+ + EY +E +++ EE+ELKR
Sbjct: 62 PAREVFKDACQELMQMNRHVRSVFDKAVAEYKDEQKRKEEAEEEELKR 109
>At1g03780.2 68414.m00358 targeting protein-related similar to
microtubule-associated protein / targeting protein for
Xklp2 ((TPX2) GI:8926138) {Homo sapiens}; similar to
Restricted expression proliferation associated protein
100 (p100) (Differentially expressed in lung cells 2)
(DIL-2) (Targeting protein for Xklp2) (C20orf1 protein)
(C20orf2 protein) (Protein FLS353)(SP:Q9ULW0) {Homo
sapiens}
Length = 725
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 290 IKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
++ + +R+D D ++KE N++++ R EE E +++E++ K
Sbjct: 618 VEHRAVERADFDHKIKEKENQYKRYR--EESEAAKMVEEERALK 659
>At5g14390.1 68418.m01681 expressed protein
Length = 369
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 515 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFPSKRR 628
D+E RQ ++ EK RQ++ + K+ GP+ SK R
Sbjct: 280 DLEMPRQSVDRREKPRQSVDKREKEKPPKGPSKKSKLR 317
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 272 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAK 415
+GD E + ++QK S LDE E Q +EED + K+AK
Sbjct: 644 DGDQEILYLKNQKWSPLDESELSQDEEAADQTGQEEDASTVPLTKKAK 691
>At2g44200.1 68415.m05500 expressed protein
Length = 493
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +2
Query: 302 DQKRSDLDEQLKE---YINEWRKQRAKEEDELKRLIEKQAKRKVS 427
+++RSDLD++ K + + +QR+ +DE KR E Q KR+ S
Sbjct: 293 ERRRSDLDDESKRRESHDKHFERQRSDLDDEYKRR-ESQDKRRRS 336
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 293 KRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKR 394
K +++RSDLD++ K ++ +++R+ +DE KR
Sbjct: 311 KHFERQRSDLDDEYKRRESQDKRRRSDIDDEPKR 344
>At1g74870.1 68414.m08677 expressed protein contains similarity to
hypothetical proteins
Length = 289
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 308 KRSDLDEQLKEYINEWRKQRAKEED---ELKRLIEKQAKRK 421
K+ +D + K++I++W+K EE+ L+ L+EK +K
Sbjct: 32 KQWKIDARRKQWISQWKKANVDEEEIGRRLRSLLEKLTDQK 72
>At1g02540.1 68414.m00205 hypothetical protein
Length = 290
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 281 PEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEED 382
PEF + RS LD+ ++EY ++ K +EE+
Sbjct: 90 PEFPLQSHDSRSTLDKHMEEYADDLEKMLDEEEE 123
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 248 TPAPKQEGEGDPEFIKRQDQKRSDLDEQ-LKEYINEWRKQRAKEEDE 385
+PAP++EG+ + E + Q+++ + ++ + +E NE + KEE++
Sbjct: 58 SPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNEEEAKEDKEEEK 104
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 263 QEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRK 421
+E E + E +K DQK +E+ ++ + K++ KEE+ + ++ K K
Sbjct: 348 EEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGKKKEVVKGK 400
>At3g21465.1 68416.m02707 expressed protein
Length = 388
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 302 DQKRSDLDEQLKEYINEWRKQRAKEEDE 385
D+K+S L+ + K+ +NEW K ++E
Sbjct: 318 DEKKSALEAEFKKLVNEWSVDIIKHQNE 345
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +2
Query: 260 KQEGE-GDPEFIKRQDQKRSD-LDEQLKEYINEWRKQRAKEE---DELKRLIEKQAKRK 421
K++GE GD E + +K D D+++KE ++ K++ K+E +E K+ +K+ K K
Sbjct: 216 KEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEK 274
>At5g64290.1 68418.m08076 oxoglutarate/malate translocator, putative
similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
translocator, chloroplast precursor. [Spinach]{Spinacia
oleracea}
Length = 563
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 56 LQEFGTRVAAAPHSNVAVLPVQEPVPS 136
+ F TR+AAAP N P P PS
Sbjct: 62 IPRFSTRIAAAPQDNAPPPPPPSPSPS 88
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 284 EFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEK 406
EF+K+++QK + + E+L + + K ++ D LK+ IE+
Sbjct: 1849 EFLKQEEQKSASVREKLNVAVRK-GKALVQQRDSLKQTIEE 1888
>At3g47720.1 68416.m05199 expressed protein
Length = 316
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +2
Query: 248 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKVS 427
TP +++G + + ++ SD D+Q NE+ ++D++ LI + + K++
Sbjct: 9 TPINEEQGSTNSSESRSNEELFSDCDQQHSSIANEFGLTELPKDDKVYELIYRHCQSKLT 68
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 263 QEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEK 406
+ G+ D E K +D++ D +QL E + E R++R +E ELKR E+
Sbjct: 135 RHGDDDVEK-KTRDEQVEDEQKQLAEEV-EKRRRRVQEWQELKRQNEE 180
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 518 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFPSKRR 628
+E+K+++LEE EKK Q + +++ + N S+ +
Sbjct: 1018 LEDKKKKLEETEKKGQQLQESLTRMEEKCSNLESENK 1054
>At5g06930.1 68418.m00783 expressed protein
Length = 657
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 272 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRL 397
E D E + +++KRSD+++ L + I + K E+EL+ +
Sbjct: 169 ESDNETLVYKEKKRSDVEKVLAQKIETMEARIEKLEEELREV 210
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 272 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKRLIEKQAKRKV 424
E DPE ++ ++ + + +E+ KE E ++ +EE+E + EK+ + V
Sbjct: 76 EQDPENVEEEESEEEEKEEEEKE--EEEEEEGEEEEEEEEEEEEKEEEENV 124
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 263 QEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAKEEDELKR 394
Q+G G+ K+ ++K + +E K+ IN KQ+ K++ + K+
Sbjct: 907 QKGSGESVKYKKDEKKEGNKEEN-KDTINTSSKQKGKDKKKKKK 949
>At1g42560.1 68414.m04907 seven transmembrane MLO family protein /
MLO-like protein 9 (MLO9) nearly identical to membrane
protein Mlo9 [Arabidopsis thaliana] GI:14091588; similar
to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221
[Hordeum vulgare][Barley]
Length = 467
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 308 KRSDLDEQLKEYINEWRKQRAKEEDELKRLIEK 406
KRS DEQ + + +W K+ K+ + L + K
Sbjct: 435 KRSVFDEQTSKALEQWHKKARKKNENLYTIFGK 467
>At1g08400.1 68414.m00929 chromosome structural maintenance
protein-related contains weak similarity to
RAD50-interacting protein 1 [Homo sapiens]
gi|11967435|gb|AAG42101
Length = 804
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 391 FELILLLGPLFAPFVDVFLQLFIQVRPLLVLTLDEFWISLTLLFRSG 251
FEL+ + FA VD FLQ I L+ + E W+S + SG
Sbjct: 321 FELVYKVTRDFADGVDDFLQPLIDRAMLVSCSAKEAWVSAMVQMLSG 367
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,890,733
Number of Sequences: 28952
Number of extensions: 209069
Number of successful extensions: 930
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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