Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31205
(566 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 223 3e-57
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 220 2e-56
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 185 6e-46
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 171 1e-41
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 146 3e-34
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 96 2e-32
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 132 7e-30
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 130 2e-29
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 126 3e-28
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 117 2e-25
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 113 2e-24
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 111 1e-23
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 105 7e-22
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 97 3e-19
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 75 9e-13
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 74 3e-12
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 69 6e-11
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 69 1e-10
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 59 8e-08
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 56 8e-07
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 55 1e-06
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 54 2e-06
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 54 2e-06
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 53 5e-06
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 52 7e-06
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 52 9e-06
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 51 2e-05
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 50 4e-05
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 49 7e-05
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 48 1e-04
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 48 1e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 2e-04
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 47 3e-04
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 47 3e-04
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 46 6e-04
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 42 0.008
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 40 0.031
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 40 0.041
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 40 0.054
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 40 0.054
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 38 0.12
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.29
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 36 0.50
UniRef50_Q855Z2 Cluster: Gp80; n=1; Mycobacterium phage Barnyard... 34 2.0
UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1; Tr... 34 2.0
UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,... 34 2.7
UniRef50_Q9HKW8 Cluster: Transposase related protein; n=2; Therm... 34 2.7
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 33 3.5
UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30; Bacter... 33 3.5
UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42; Lactob... 33 4.7
UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast ... 33 6.2
UniRef50_Q5KRC3 Cluster: Putative uncharacterized protein; n=2; ... 32 8.1
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 32 8.1
UniRef50_O44496 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 223 bits (544), Expect = 3e-57
Identities = 97/175 (55%), Positives = 127/175 (72%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL+G KV VVRCE++N+SG+F+RNK+K +++LRK CNVNPARGPFHFRAPS+I +K VRG
Sbjct: 29 LLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRG 88
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MIPHKT+RG+ AL RLR +DG P P+D L+ R YC VGRLSHE+G
Sbjct: 89 MIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVG 148
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
W Y+DV++ LE KRK K + + ++LK++T A E ++KA PF II+SYGY
Sbjct: 149 WHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAEPFNKIIKSYGY 203
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 220 bits (537), Expect = 2e-56
Identities = 96/175 (54%), Positives = 123/175 (70%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
+L G KVVVVRCE + +SG+FFRNK+K +++LRK CNVNPARGPFHFRAPS++LWK VRG
Sbjct: 29 ILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKRCNVNPARGPFHFRAPSRMLWKAVRG 88
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
M+PHKT+RG NALKRL+ Y+G P PFD CL+P R +C VGR++HE+G
Sbjct: 89 MVPHKTKRGHNALKRLKVYEGIPSPFDRQKRLCVPTAMRQLCLRPDRKFCDVGRVAHEVG 148
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
WKYRDVV LE KRK K+ + KKLK++T A V+ +++ YGY
Sbjct: 149 WKYRDVVNNLEAKRKIKSRLSYLHSKKLKKLTWKARTAVADKVKDQDAVLRKYGY 203
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 185 bits (451), Expect = 6e-46
Identities = 84/175 (48%), Positives = 114/175 (65%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G +VV VR E+INISG+ FRNKLK +FL+K N NP RGPFHFR+P++ILW+T+RG
Sbjct: 26 LLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRG 85
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MIPHKT RG AL+RL+ ++G PPP+D LKPGR +C +GRL+ E+G
Sbjct: 86 MIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVG 145
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
W++ D+V +LE+KRK K+ A +K L + A V+ T + YG+
Sbjct: 146 WRHSDLVTRLEEKRKTKSAAFYARKKTLVNLRAKAAVAVASKTANIQKELDHYGF 200
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 171 bits (416), Expect = 1e-41
Identities = 78/153 (50%), Positives = 104/153 (67%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G +VVVVRCE+I +SG R K+K + FLRK N P+ GP HFRAPSKILW+T+RG
Sbjct: 32 LLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRG 91
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MIPHKT+RG AL RL+ Y+G PPP+D L+ G YC +G+LS E+G
Sbjct: 92 MIPHKTKRGAAALARLKVYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGKLSSEVG 151
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITK 459
W + D +++LEDKRK +A +V YE++ K++ K
Sbjct: 152 WNHYDTIKELEDKRKERA--QVTYERR-KQLAK 181
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 146 bits (354), Expect = 3e-34
Identities = 71/175 (40%), Positives = 102/175 (58%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G ++VVVR E INISG+ FRN++K FL K N NP RG HFRAPS+I W+ VRG
Sbjct: 98 LLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMNHNPRRGVQHFRAPSRIFWRAVRG 157
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
M+PHKT +G AL+RL+ ++G P P+D L+ R C +G LS +G
Sbjct: 158 MLPHKTPKGAAALERLKIFEGIPTPYDRVKKQVVVDALKVQRLRNSRPVCKLGDLSASVG 217
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
W + ++ KLE+KR+ +A + ++KK+K+ E + A + +GY
Sbjct: 218 WGKQTLIEKLEEKRRARA--KTYHDKKVKQADARKKELAAPALKAIKDKLAQFGY 270
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 96.3 bits (229), Expect(2) = 2e-32
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G KVVVV E INISGNF+RNKLK ++FL K N NP+RGP+ F+APS+I W T RGM+P
Sbjct: 29 GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNTNPSRGPYRFQAPSRIFWWTARGMLP 88
Query: 190 HKTERGKNALKRLRTY 237
HKT LK R +
Sbjct: 89 HKTNLKVVRLKPTRKF 104
Score = 65.7 bits (153), Expect(2) = 2e-32
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +1
Query: 307 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKA 486
LKP R + ++GRL+H++GWKY+ V LE+ RK KA +K+L R+ K A + V K
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKAKIHYWKKKQLMRLWKQAKKNVEKK 157
Query: 487 TTPFTTIIQSYG 522
T +T ++++G
Sbjct: 158 TDKYTEFLKTHG 169
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 132 bits (318), Expect = 7e-30
Identities = 68/175 (38%), Positives = 98/175 (56%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G++V +VRCE+ ISG F K + + K N N RGPFHFRAP++I+ +T+RG
Sbjct: 24 LLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNHLRGPFHFRAPAEIVRRTIRG 83
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MIP+KT RG +A+ RLR YDG PP CL+P R C VGR++HEIG
Sbjct: 84 MIPYKTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAMAYLCLRPERRRCEVGRVAHEIG 143
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
W++ V + E +R + K + ++ + +A EK ++ + YGY
Sbjct: 144 WQHAADVERYEKRRLEECDKWYQDKIQIDKKIAEAAEKDAELQR-INAELAKYGY 197
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 130 bits (314), Expect = 2e-29
Identities = 69/177 (38%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G K+ VVRCEQ+NI+G RNK+K + +LRK NP +GPFH RAPS + +TVR
Sbjct: 45 LLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNPTKGPFHHRAPSDVFVRTVRS 104
Query: 181 MIPHKTERGKNALKRLRTYDGCPP-PFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEI 357
M+P T+RG AL L Y+G PP C + R Y +G + +
Sbjct: 105 MLPRYTKRGMKALNSLVAYEGIPPNVVRTGGRVVIPRAQRHVCYRSERPYTVLGNMCKHV 164
Query: 358 GWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDA-GEKVSKATTPFTTIIQSYGY 525
GWKY DVV LE R KA + + KL+ K A E ++K +++ +GY
Sbjct: 165 GWKYSDVVANLEKARVEKASRHHEKQAKLRDAWKSARKEALAKMPKHNVEVLKKFGY 221
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 126 bits (305), Expect = 3e-28
Identities = 62/175 (35%), Positives = 93/175 (53%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL+G VVVVR E I +SG R ++ + K N NP +GP+H+ +PS++ WKTVRG
Sbjct: 25 LLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMNTNPKKGPYHYTSPSRLFWKTVRG 84
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
M+PHKT RG A +R + Y+G P P+D L G +C +G +IG
Sbjct: 85 MLPHKTVRGAAAFERFKAYEGIPAPYDKVKRAVVPEALKVLRLGEGHRFCVLGDFCEQIG 144
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
WK+ +V++LE KR+ A + A +K+ A + +I++ GY
Sbjct: 145 WKHGAIVKELEAKRQTAASEYWAQKKEANSKFAAAKAAANAQLGDLQQLIEATGY 199
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 117 bits (281), Expect = 2e-25
Identities = 64/161 (39%), Positives = 88/161 (54%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL+G KVVVVRCE+I ++G FL K N NP GPFH RAP +I + VRG
Sbjct: 25 LLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNPRDGPFHQRAPHEIFARAVRG 84
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MIP+KT RG +A L+ Y+G P + + + R +GRLS +G
Sbjct: 85 MIPYKTHRGADAFANLQCYEGIPAKYVSYKRLVIPHALRCVSIHTDRPTTKLGRLSTTMG 144
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 483
WKY +VV +LE++RK ++ K +K + A EKV+K
Sbjct: 145 WKYGNVVAQLEEQRKAESAKYFEAKKAAQDKRAAAIEKVNK 185
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 113 bits (273), Expect = 2e-24
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 2/153 (1%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
+L+G+K++++R E +I+G RN K S +K N NP RGPFHF++PSKIL++T++
Sbjct: 24 ILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNTNPRRGPFHFKSPSKILYQTIKR 83
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MIPHKT RG ALK L+ ++G P F +K R ++G++ +G
Sbjct: 84 MIPHKTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAFRYKVIKNYRKTVNLGKVCEVLG 143
Query: 361 WKYRDVVRKLEDK--RKGKAVKRVAYEKKLKRI 453
WK R + + D+ GK V + E K RI
Sbjct: 144 WKNRKFIEQKSDQLAALGKVVLKKKKEIKKFRI 176
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 111 bits (266), Expect = 1e-23
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = +1
Query: 109 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXX 288
N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+ AL RL+ Y+ PP+D
Sbjct: 42 NTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPD 101
Query: 289 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVR 384
L+PG YC +G+LS E+GW Y D +R
Sbjct: 102 ALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 133
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 105 bits (252), Expect = 7e-22
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = +1
Query: 304 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 483
CLKPGR YCHVGRLSHE+GWKY+ V+ LE KR+ K + +K+KR+TK A +K+ K
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVKVAIKARKHRKMKRLTKKASKKIEK 63
Query: 484 ATTPFTTIIQSYGYN 528
P+T +I+SYGYN
Sbjct: 64 QVAPYTAVIKSYGYN 78
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 97.1 bits (231), Expect = 3e-19
Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LLEG +V VV E+ G+ R K +L K C VNP RGPFHFR P L K +R
Sbjct: 27 LLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNPRRGPFHFREPRMHLAKIIRR 86
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
MI +K RGK A+ RL TY+G P + + P R Y +G+L G
Sbjct: 87 MISYKKPRGKAAMSRLATYEGIPRELEGQPRYKVTCAFVKYTGNPNR-YVTLGKLLSMFG 145
Query: 361 WKYRDVVRKLEDKRKGK----AVKRVAYEKKLKRITKD 462
WK+ + + L D+ K + ++++ +KK++ + D
Sbjct: 146 WKHAEAAKSLTDELKERESLASLQKKDLDKKIEELKTD 183
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 75.4 bits (177), Expect = 9e-13
Identities = 40/121 (33%), Positives = 58/121 (47%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LLEGN+V ++ CE++ ISG + FL+ ++P GP+H R P I+ + +RG
Sbjct: 20 LLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPEHGPYHPRRPDTIMTRMIRG 79
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
M+P K GK A RLR Y G P + +P NY + L +G
Sbjct: 80 MLPRKKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGAE---ITRPTANYTTMADLGETVG 136
Query: 361 W 363
W
Sbjct: 137 W 137
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 73.7 bits (173), Expect = 3e-12
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGN--FFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTV 174
LLEG +VV+V E+ I+GN +K K + LR NP RGPF+ + +I+ +T+
Sbjct: 22 LLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTL--TNPRRGPFYPKRSDEIVRRTI 79
Query: 175 RGMIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 354
RGM+P KT+RG+ A +RL+ Y G P F + +P Y VG ++
Sbjct: 80 RGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEAHVSRLSRP--KYVTVGEVAKF 137
Query: 355 IGWKY 369
+G K+
Sbjct: 138 LGGKF 142
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 69.3 bits (162), Expect = 6e-11
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
L +G++V +V CE+I SG + FL +NP GP H+R P I+ K +R
Sbjct: 34 LKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINSIINPKHGPVHYRRPDTIITKMIRQ 93
Query: 181 MIPH-KTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEI 357
M+P+ + GK ++KRLR Y G P + K NY +G L I
Sbjct: 94 MLPYDRKPSGKESIKRLRAYIGSPKELKSLEKIQFEKAKIK---KSPSNYTTMGELCRVI 150
Query: 358 GW 363
GW
Sbjct: 151 GW 152
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 68.5 bits (160), Expect = 1e-10
Identities = 40/122 (32%), Positives = 63/122 (51%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
+L+G ++ V+ E+ I+G +N +K +L+K +P +GPF+ R P I + VRG
Sbjct: 36 ILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPKKGPFYPRRPDLIFRRVVRG 92
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
M+P KT+RG+ A KRLR Y G P + Y +G LS E+G
Sbjct: 93 MLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADMSRLGHLWYVTLGELSEELG 152
Query: 361 WK 366
++
Sbjct: 153 YQ 154
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G ++VVV E+ I+G+ + + + K + +GP+ R P +I +TVRG
Sbjct: 37 LLNGERIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKEKGPYFPRHPERIFKRTVRG 93
Query: 181 MIPHKTERGKNALKRLRTYDGCP 249
M+P K+ RG++A +RLR + G P
Sbjct: 94 MLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 55.6 bits (128), Expect = 8e-07
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLK-LMSFLRKXCNVNPA-RGPFHFRAPSKILWKTV 174
LL+G++VVVV E+I I+G R K L ++ NP RGP + + P ++ + V
Sbjct: 28 LLKGDRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTYYNPELRGPKYPKTPDRLFKRMV 87
Query: 175 RGMIPHKTERGKNALKRLRTYDGCPPPFDN 264
RGM+P + G+++LKRL Y G P + N
Sbjct: 88 RGMLPMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
L G +V +V E+ I+G+ N +K +L+K + +GPF+ + P IL + +RG
Sbjct: 27 LKRGYRVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDYYKGPFYPKRPDNILKRVIRG 83
Query: 181 MIPHKTERGKNALKRLRTYDGCP 249
M+P KT RG+ LK ++ Y G P
Sbjct: 84 MLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
+L+G V VV E+ I+GN + M + GP++ + P +I + +RG
Sbjct: 30 VLDGETVAVVNAERAVITGN----EEATMETYHTRAELGSDSGPYYPKRPDRIFKRAIRG 85
Query: 181 MIPHKTERGKNALKRLRTYDGCP 249
M+P+KTE G+ AL +R Y G P
Sbjct: 86 MLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 LLEGN-KVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVR 177
LL G+ KV ++ E+ ISG+ L + GP+ + P +IL +T+R
Sbjct: 22 LLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGATEFGPYFPKRPDRILKRTIR 78
Query: 178 GMIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEI 357
GM+P+K RG++A+ RL+ Y G P++ L Y +G +S ++
Sbjct: 79 GMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADADMRLLSSNKYVELGEVSQKM 136
Query: 358 GWKY 369
G K+
Sbjct: 137 GSKF 140
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 52.8 bits (121), Expect = 5e-06
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +1
Query: 346 SHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 525
+HE+GW+Y+ +V KLE+KRK K +K ++ + A EK T + +++ YGY
Sbjct: 1 AHEVGWQYQGIVEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKAKTAVYDKVLEQYGY 60
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 52.4 bits (120), Expect = 7e-06
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = +1
Query: 16 KVVVVRCEQINISGNFFRNKLKLMSFLRKXC----NVNPAR-GPFHFRAPSKILWKTVRG 180
++VVV E++ I+G+ K+ + F RK + NP + GP R P ++ + VRG
Sbjct: 46 RIVVVNAEKLVITGD---EKMVIEWFKRKISEWRTHYNPEKAGPKVPRRPDRVFKRIVRG 102
Query: 181 MIPHKTERGKNALKRLRTYDGCP 249
M+P K+E G++ALKRLR Y P
Sbjct: 103 MLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 52.0 bits (119), Expect = 9e-06
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +1
Query: 4 LEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGM 183
L+G V VV E+ I+G + +++ K ++ G F+ + P I +T+RGM
Sbjct: 31 LDGETVAVVNAERAVITGR----EEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGM 86
Query: 184 IPHKTERGKNALKRLRTYDGCP 249
+PHK +RG+ A + +R Y G P
Sbjct: 87 LPHKKQRGREAFESVRVYLGNP 108
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWK 168
LL G K+V+VRCE + + G ++ + RK N NP RG FH R+P++++ K
Sbjct: 32 LLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNTNPTRGAFHHRSPAEMVRK 87
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/106 (26%), Positives = 46/106 (43%)
Frame = +1
Query: 85 MSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALKRLRTYDGCPPPFDN 264
+ + + NP+ GPF F P I TV+ ++P+K + + L+ L+ +D +
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFDKTKQMIIS 65
Query: 265 XXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKR 402
CL G L++E GWKY+ V LE K+
Sbjct: 66 VQICVSEATSRFACL---------GYLTYESGWKYQVVTNTLEKKK 102
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 49.2 bits (112), Expect = 7e-05
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPAR-GPFHFRAPSKILWKTVR 177
L EG KV++V E+ ISG R L NP R G R+P I+ +T+R
Sbjct: 30 LKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNPYRNGIRRPRSPINIVKRTIR 89
Query: 178 GMIPHKTERGKNALKRLRTYDGCPPPFD 261
GM+P K+ +G+ LK ++ Y G P F+
Sbjct: 90 GMLP-KSSKGRRMLKNVKIYVGVPKEFE 116
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 KVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIPH- 192
+V+++ E ++G ++++ L + RK +P +GPF R P IL +TVRGM+P+
Sbjct: 38 RVIIINAEMAIVTGP--KDRI-LADYDRKYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQ 94
Query: 193 KTERGKNALKRLRTYDGCP 249
K G+ A+K LR G P
Sbjct: 95 KKSSGRQAVKDLRVMIGTP 113
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 48.4 bits (110), Expect = 1e-04
Identities = 31/151 (20%), Positives = 60/151 (39%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
L +G + V+RC+ + SG + +++ NP +GP+ F PS +L K V+G
Sbjct: 25 LKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRTNPNKGPYFFSNPSSLLKKIVKG 84
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 360
M+ + K + ++ P + + LKP + + + + G
Sbjct: 85 MLNKLNKSHTLLFKSVECFNDTPNRYIYNYKLFLKNSHKNYKLKPDSKFTKLYEILPKFG 144
Query: 361 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRI 453
W+ R + K ++ KKL +
Sbjct: 145 WQDRSSCTESNSKNGIRSTIYSFNSKKLNNL 175
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 202 RGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 354
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 LEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPAR-GPFHFRAPSKILWKTVRG 180
L G ++ VV E+ ++GN K + + NP + GP + R P I+ + +RG
Sbjct: 23 LSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNPKKMGPKYPRRPDDIVRRVIRG 82
Query: 181 MIPHKTERGKNALKRLRTYDGCP 249
M+P+K RG A K+++ G P
Sbjct: 83 MLPYKKPRGVEAFKKIKIEVGVP 105
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 47.2 bits (107), Expect = 3e-04
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARG----PFHFRAPSKILWK 168
LL G +V VV E+I +SG+ ++ + S+ V P R P ++
Sbjct: 31 LLAGWRVNVVNAEKIVLSGD---PRMVVESYRTTVLGVKSHFSHKWRPKRPRTPQRLFKH 87
Query: 169 TVRGMIPHKTERGKNALKRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLS 348
VRGM+P RG+ AL RLR Y G P D + +Y +G ++
Sbjct: 88 AVRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRFPEADASRLSSHYIELGAVA 144
Query: 349 HEIGWK 366
++GWK
Sbjct: 145 RQLGWK 150
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 25 VVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHF 141
+VRCE+I ISG R K+K M FLR+ N P+ GP F
Sbjct: 21 LVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 42.3 bits (95), Expect = 0.008
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRG 180
LL G + +V ++ I+G R + + F + +GP++ + +IL +++
Sbjct: 22 LLNGESITIVNASKVVITG---RKEFIIDKFNNLRNTGSIRKGPYYPKTADRILKRSIGD 78
Query: 181 MIPHKTERGKNALKRLRTYDGCPPPFDN 264
M+P K G ALKR Y P +N
Sbjct: 79 MLPKKKTHGMEALKRCMVYANVPKSLEN 106
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 40.3 bits (90), Expect = 0.031
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G+ VVVV ++I +SGN KL R R P +I+ K ++GM+P
Sbjct: 52 GDFVVVVNADKIRVSGNKANQKLYRRHSGRPGGMKVETFQALQDRLPERIVEKAIKGMLP 111
Query: 190 HKTERGKNALKRLRTYDGCPPP 255
H G+ ++L+ Y G P
Sbjct: 112 HNA-LGRQLFRKLKVYRGPEHP 132
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 39.9 bits (89), Expect = 0.041
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLR-KXCNV-NPARGPFHFRAPSKILWKTVRGM 183
G VVV+ ++I ++GN KL +R K ++ H R P++++ K ++GM
Sbjct: 110 GVNVVVINADKIVVTGNKANQKLYYTLGVRGKPGSMKEETYASLHARQPARVIEKAIKGM 169
Query: 184 IPHKTERGKNALKRLRTYDGCPPP 255
+P K G+ L+ Y G P
Sbjct: 170 LP-KNRMGRETFTHLKVYAGADHP 192
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 39.5 bits (88), Expect = 0.054
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G+ VVVV E+I +SG + KL R R P +I+ K ++GM+P
Sbjct: 52 GDFVVVVNAEKIQVSGKKPQQKLYRRHSGRPGGMKVETFESLQERIPERIVEKAIKGMLP 111
Query: 190 HKTERGKNALKRLRTYDGCPPP 255
H G+ ++L+ Y G P
Sbjct: 112 HNA-LGRQMYRKLKVYKGTEHP 132
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 39.5 bits (88), Expect = 0.054
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPAR-GPFHFRAPSKILWKTVR 177
L G KV VV E+ ISG R NP R G R P I+ +TVR
Sbjct: 28 LKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNPYRQGIRRPRNPINIVKRTVR 87
Query: 178 GMIPHKTERGKNALKRLRTYDGCP 249
GM+P K + GK + L+ Y G P
Sbjct: 88 GMLP-KNKLGKQIYRNLKAYIGIP 110
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 38.3 bits (85), Expect = 0.12
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 LEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHF--RAPSKILWKTVR 177
+ N V+++ Q+ I+GN +N K+ +H R P++IL + V+
Sbjct: 50 MSANFVIIINSRQVAITGN--KNTQKVYKRYSAKPGATKTESFYHLKKRIPNRILEQAVK 107
Query: 178 GMIPHKTERGKNALKRLRTYDGCPPP 255
GM+P K+ GK L+ Y G P
Sbjct: 108 GMLP-KSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 37.1 bits (82), Expect = 0.29
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -1
Query: 224 LLRAFLPRSVLCGIMPLTVFHRILDGALKWKGPRAGFTLHXLRRNDISLSLFLKKLPEML 45
+LR F R+ L FHR L+W+ R+G + + + +S S F+KK+P
Sbjct: 1 MLRYFSQRNSLAACSSSGCFHR-----LEWRACRSGESPYKFQSLSVSRSKFIKKVPSGR 55
Query: 44 ICSQRTTTTLFPSR 3
+ SQ T+ P R
Sbjct: 56 VISQSTSAFWLPFR 69
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 36.3 bits (80), Expect = 0.50
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRK-XCNVNPARGPFHFRAPSKILWKTVRGMI 186
G+ VVV C++I ++G F K R + + +IL K V GM+
Sbjct: 54 GDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGML 113
Query: 187 PHKTERGKNALKRLRTYDGCPPPF 258
P K + K L RL+ +DG P+
Sbjct: 114 P-KNKLRKQRLDRLKVFDGSENPY 136
>UniRef50_Q855Z2 Cluster: Gp80; n=1; Mycobacterium phage
Barnyard|Rep: Gp80 - Mycobacterium phage Barnyard
Length = 1111
Score = 34.3 bits (75), Expect = 2.0
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +1
Query: 310 KPGRNYCHVG-----RLSHEI--GWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT-KDA 465
KP R C G +LS EI GWKYR R +RK + VKR+ YE K+ IT KD
Sbjct: 296 KPLRFVCDKGLTAKQQLSREIAKGWKYRVAQRPDMARRKAEYVKRLQYEFKI--ITDKDF 353
Query: 466 GE 471
G+
Sbjct: 354 GD 355
>UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 8
- Tribolium castaneum (Red flour beetle)
Length = 379
Score = 34.3 bits (75), Expect = 2.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 58 NFFRNKLKLMSFLRKXCNVNPARGPFHFRAP--SKILWKTVRGMI 186
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG9186-PB, isoform B - Apis mellifera
Length = 309
Score = 33.9 bits (74), Expect = 2.7
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 222 LKSILATLCFVW--DHASYSLP*NLRWSSKMERSTSRIHVAXLTQE*HKLEFVPKEVARD 49
+KS L T VW HA + P N + S H + +TQ HK++F+ K V D
Sbjct: 55 VKSKLPTEVPVWIISHAGHVQPPNNLAITMPSNSNWTEHYSLMTQVQHKIDFIKKYVPED 114
Query: 48 VDLFAANHN 22
V + H+
Sbjct: 115 VKIHLIGHS 123
>UniRef50_Q9HKW8 Cluster: Transposase related protein; n=2;
Thermoplasmatales|Rep: Transposase related protein -
Thermoplasma acidophilum
Length = 350
Score = 33.9 bits (74), Expect = 2.7
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 334 VGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 483
+G+ + I KY+ + +KL+ K+K K +K++ + + RI +D KVSK
Sbjct: 157 LGKKAEHIHNKYKAIRKKLQKKKKYKLLKKI--KDRESRIVRDLNHKVSK 204
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 33.5 bits (73), Expect = 3.5
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKL-KLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMI 186
G+ VVVV +++ ++G K+ + + R R P +IL + VRGM+
Sbjct: 51 GDFVVVVNADKVEVTGRKAEQKVYRWHTGYPGGLRERSYRQMLRKR-PEEILRQAVRGMM 109
Query: 187 PHKTERGKNALKRLRTYDGCPPP 255
P KT + LK+LR Y G P
Sbjct: 110 P-KTRLARRQLKKLRIYAGPEHP 131
>UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30;
Bacteria|Rep: 50S ribosomal protein L13 - Nitrosomonas
europaea
Length = 144
Score = 33.5 bits (73), Expect = 3.5
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G+ +VV+ +++ ++GN +K H R P++ L K V+GM+P
Sbjct: 51 GDYIVVINADKLRVTGNKAEDKKYYRHSGYPGGIYETTFKKMHERFPTRPLEKAVKGMLP 110
Query: 190 HKTERGKNALKRLRTYDGCPPP 255
K G +K+L+ Y G P
Sbjct: 111 -KGPLGYAMIKKLKIYAGDTHP 131
>UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42;
Lactobacillales|Rep: 50S ribosomal protein L13 -
Streptococcus mutans
Length = 148
Score = 33.1 bits (72), Expect = 4.7
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G+ V+V+ E++ ++G NK+ + + G + +++ K+V+GM+P
Sbjct: 53 GDFVIVINAEKVKLTGKKAANKIYYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLP 112
Query: 190 HKTERGKNALKRLRTYDG 243
H T G+ +L+ + G
Sbjct: 113 HNT-LGRAQGMKLKVFVG 129
>UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast
precursor; n=47; cellular organisms|Rep: 50S ribosomal
protein L13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 241
Score = 32.7 bits (71), Expect = 6.2
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G V+VV E++ +SG KL R R P +I+ VRGM+P
Sbjct: 141 GAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP 200
Query: 190 HKTERGKNALKRLRTYDGCPPPFD 261
K G+ L+ Y G P +
Sbjct: 201 -KGRLGRALFNHLKVYKGPDHPHE 223
>UniRef50_Q5KRC3 Cluster: Putative uncharacterized protein; n=2;
Corynebacterium glutamicum|Rep: Putative uncharacterized
protein - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 118
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 389 LKTRGRARLLRELPMKRNLRGSPRMLVRRCRRR---QHHSLPS 508
L TR RL+ LP R+L+GS RML++ + Q HS PS
Sbjct: 27 LSTRQPYRLVAALPPARSLKGSSRMLIQNGPKNLADQSHSSPS 69
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 32.3 bits (70), Expect = 8.1
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 10 GNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRGMIP 189
G+ V+V+ +++ ISG F K R + R P +I+ K V+GM+P
Sbjct: 107 GDYVIVINADKVVISGAKFYQKEYFRHSGRPGGVTVESFEQLQARIPERIVEKAVKGMLP 166
Query: 190 HKTERGKNALKRLRTYDG 243
K G+ + L+ + G
Sbjct: 167 -KGPLGREQFRHLKVFAG 183
>UniRef50_O44496 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 664
Score = 32.3 bits (70), Expect = 8.1
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 322 NYCHVGRLS--HEIGWKYRDVVRKLEDKRKGKAVK-RVAYEKKLKRITKDAGEKV 477
+YC G+ S H I WKYRD V ++ K K A++ R A E K I D +KV
Sbjct: 284 DYC-TGKTSILHRIQWKYRDAV-IVQAKEKMSAIELRRAIEAKTNVILHDVEQKV 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,739,058
Number of Sequences: 1657284
Number of extensions: 11204992
Number of successful extensions: 30209
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 29311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30189
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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