Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31201
         (390 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM083078-1|CAL07224.1|  101|Homo sapiens immunoglobulin heavy ch...    31   1.3  
U27699-1|AAA87029.1|  614|Homo sapiens pephBGT-1 betaine-GABA tr...    29   5.3  
L42300-1|AAA66574.1|  614|Homo sapiens betaine/GABA transporter ...    29   5.3  
BC126217-1|AAI26218.1|  614|Homo sapiens solute carrier family 6...    29   5.3  
BC126215-1|AAI26216.1|  614|Homo sapiens solute carrier family 6...    29   5.3  
X99699-1|CAA68030.1|  317|Homo sapiens XIAP associated factor-1 ...    29   7.1  
BC073156-1|AAH73156.1|  301|Homo sapiens XIAP associated factor-...    29   7.1  
BC064590-1|AAH64590.1|  306|Homo sapiens Yip1 domain family, mem...    28   9.3  

>AM083078-1|CAL07224.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 56  NWERYTPFQYNRVYSTVSPFGYKPGRYVADPSRYDPSRDN 175
           NW R TP +  +  STVS FG K     +   R+  SRDN
Sbjct: 38  NWVRQTPGKGLQWVSTVSAFGDKEDNADSGKGRFTISRDN 77


>U27699-1|AAA87029.1|  614|Homo sapiens pephBGT-1 betaine-GABA
           transporter protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 65  RYTPFQYNRVYSTVSPFGYKPGRYVA 142
           +YTP +YN VY    P+GY  G ++A
Sbjct: 519 KYTPLKYNNVY-VYPPWGYSIGWFLA 543


>L42300-1|AAA66574.1|  614|Homo sapiens betaine/GABA transporter
           protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 65  RYTPFQYNRVYSTVSPFGYKPGRYVA 142
           +YTP +YN VY    P+GY  G ++A
Sbjct: 519 KYTPLKYNNVY-VYPPWGYSIGWFLA 543


>BC126217-1|AAI26218.1|  614|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, betaine/GABA), member 12
           protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 65  RYTPFQYNRVYSTVSPFGYKPGRYVA 142
           +YTP +YN VY    P+GY  G ++A
Sbjct: 519 KYTPLKYNNVY-VYPPWGYSIGWFLA 543


>BC126215-1|AAI26216.1|  614|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, betaine/GABA), member 12
           protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 65  RYTPFQYNRVYSTVSPFGYKPGRYVA 142
           +YTP +YN VY    P+GY  G ++A
Sbjct: 519 KYTPLKYNNVY-VYPPWGYSIGWFLA 543


>X99699-1|CAA68030.1|  317|Homo sapiens XIAP associated factor-1
           (ZAP-1) protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 258 LDPVLLEVPEEPTSEPRQDLIKY--LGDAYKGSTIVPLPGVN 377
           LDP+L+  P+  TS PR D   Y  L    +   ++PLP +N
Sbjct: 239 LDPLLMSEPKPRTSSPRGDKAAYDILRRCSQCGILLPLPILN 280


>BC073156-1|AAH73156.1|  301|Homo sapiens XIAP associated factor-1
           protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 258 LDPVLLEVPEEPTSEPRQDLIKY--LGDAYKGSTIVPLPGVN 377
           LDP+L+  P+  TS PR D   Y  L    +   ++PLP +N
Sbjct: 239 LDPLLMSEPKPRTSSPRGDKAAYDILRRCSQCGILLPLPILN 280


>BC064590-1|AAH64590.1|  306|Homo sapiens Yip1 domain family, member
           1 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 151 AWISYIAAWFIAEWRNSRVNSVV 83
           AW+  +A W    WRNS+V ++V
Sbjct: 172 AWLVPLALWGFLMWRNSKVMNIV 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,705,561
Number of Sequences: 237096
Number of extensions: 861454
Number of successful extensions: 2172
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)