Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31201
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.71 
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   3.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   3.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   3.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   6.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   8.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   8.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   8.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   8.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
 Frame = +2

Query: 29  VSDSGAGRRNWERYTPFQYNRVYSTVSPFGYKPGR-YVADPSRYDPSRDN-----CWPLH 190
           V++   GRR W++Y    Y+   S+ S       R Y A  S  DP   N       PLH
Sbjct: 36  VAEELMGRRRWKQYQDTLYSGTRSSESLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLH 95

Query: 191 LPDNS 205
            P +S
Sbjct: 96  PPASS 100


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +2

Query: 26  PVSDSGAGRRNWERYTPFQYNRVYSTVS 109
           P+S++     N+  Y    YN++Y  ++
Sbjct: 87  PLSNNYNYNNNYNNYNKHNYNKLYYNIN 114


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 154 TAWISYIAAWFIA 116
           T  + +IAAWFIA
Sbjct: 3   TLGVLFIAAWFIA 15


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 154 TAWISYIAAWFIA 116
           T  + +IAAWFIA
Sbjct: 3   TLGVLFIAAWFIA 15


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 154 TAWISYIAAWFIA 116
           T  + +IAAWFIA
Sbjct: 3   TLGVLFIAAWFIA 15


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 59  WERYTPFQY 85
           WERY P  Y
Sbjct: 77  WERYQPISY 85


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 374 HAGQGNNGGSLVSITKV 324
           H G G N G  + ITK+
Sbjct: 148 HTGVGRNVGYKIPITKL 164


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 374 HAGQGNNGGSLVSITKV 324
           H G G N G  + ITK+
Sbjct: 148 HTGVGRNVGYKIPITKL 164


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 374 HAGQGNNGGSLVSITKV 324
           H G G N G  + ITK+
Sbjct: 148 HTGVGRNVGYKIPITKL 164


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 155 NGLDQLHSGLVYS 117
           NGLD LH  L +S
Sbjct: 98  NGLDNLHEYLKFS 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,603
Number of Sequences: 438
Number of extensions: 1818
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)