Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31200
         (392 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re...    45   6e-04
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    31   6.0  

>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
           Troponin I - Drosophila melanogaster (Fruit fly)
          Length = 269

 Score = 44.8 bits (101), Expect = 6e-04
 Identities = 20/24 (83%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
 Frame = +3

Query: 3   DKKPDWSKGKPGDQKVKEE-EVEA 71
           +KKPDWSKGKPGD KVKEE E EA
Sbjct: 246 EKKPDWSKGKPGDAKVKEEVEAEA 269


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 354 GGARYPIRPIVSR 392
           GGARYPIRPIVSR
Sbjct: 261 GGARYPIRPIVSR 273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,300,158
Number of Sequences: 1657284
Number of extensions: 5998938
Number of successful extensions: 7704
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7704
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)