Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31198
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    24   1.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.9  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   2.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.8  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   5.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   8.9  

>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
          acetylcholinesterase protein.
          Length = 50

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 40 N*WIPRAAGIRHEGD 84
          N W+P+   IRH GD
Sbjct: 17 NIWVPQRLRIRHHGD 31


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 330 SSPENERPSTVCSEPSPLSAP 268
           +SPE +    V  EP+PL++P
Sbjct: 78  TSPEPDPEIPVAPEPAPLASP 98


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 336 RCSSPENERPSTVCSEPSPLSAPQWQCHCC 247
           +C S +NE P   C E  P+  P   C  C
Sbjct: 81  QCRSIKNECPEPTCDE--PVHRPGRCCKTC 108


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 426 FGSEHPQLDKVVQVLPFVPH 485
           FGS+   ++ +VQ +P VP+
Sbjct: 881 FGSDDTSINMIVQEVPEVPY 900


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 601 PDSGAGWCCQRPWVRP 554
           PD+   WC +R W  P
Sbjct: 113 PDAMGKWCPRREWSSP 128


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 601 PDSGAGWCCQRPWVRP 554
           PD+   WC +R W  P
Sbjct: 269 PDAMGKWCPRREWSSP 284


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 356 QVPQLLGGGGKTKWTSRPR 412
           QVPQL GGG +    +R R
Sbjct: 320 QVPQLAGGGRRGPGPARSR 338


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 350 CSSEPGVVLRRTSDR 306
           C SEPG+ L+R   R
Sbjct: 208 CDSEPGIPLKRKQRR 222


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 646 CSAEICTG*KKRSQIPDSGAGWCCQRP 566
           C    CTG ++ + IP   AG+  + P
Sbjct: 125 CMCRPCTGVEESAVIPQEIAGYADEGP 151


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +2

Query: 140 NHPRSIVNPGYCWRVDENGYDSELKGGPLNND 235
           +HP ++++ GY   +    YD     G +  +
Sbjct: 125 SHPYTVISNGYSSPMSSGSYDPYSPNGKIGRE 156


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 96  LTREVTLVPNSCSPGDPLVIERPP 25
           LT + T  P++     P+V+ +PP
Sbjct: 173 LTTKFTTKPSTKPTNKPVVVTKPP 196


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 377 LPEVVVLALCSSEPGVVL 324
           +P  + LALC +EP V L
Sbjct: 4   VPLAIFLALCHAEPIVEL 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,462
Number of Sequences: 336
Number of extensions: 4455
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)