Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31197
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.049
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.049
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.049
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.049
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.086
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   1.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   2.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   2.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   5.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   9.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   9.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    19   9.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.049
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = +1

Query: 7    REIEYKK-QRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
            RE+  KK ++++EE++++ EEA  KR+A  +++ G  Q  G
Sbjct: 1062 REVAVKKTKKELEEEKKQAEEA--KRKAKQKSLLGFLQSGG 1100


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.049
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = +1

Query: 7    REIEYKK-QRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
            RE+  KK ++++EE++++ EEA  KR+A  +++ G  Q  G
Sbjct: 1062 REVAVKKTKKELEEEKKQAEEA--KRKAKQKSLLGFLQSGG 1100


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.049
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = +1

Query: 7    REIEYKK-QRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
            RE+  KK ++++EE++++ EEA  KR+A  +++ G  Q  G
Sbjct: 1062 REVAVKKTKKELEEEKKQAEEA--KRKAKQKSLLGFLQSGG 1100


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.049
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = +1

Query: 7    REIEYKK-QRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
            RE+  KK ++++EE++++ EEA  KR+A  +++ G  Q  G
Sbjct: 1062 REVAVKKTKKELEEEKKQAEEA--KRKAKQKSLLGFLQSGG 1100


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.086
 Identities = 26/100 (26%), Positives = 44/100 (44%)
 Frame = +1

Query: 10   EIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLER 189
            E+  KK+ D EE+ +     + KR+A  +     ++    N   ++  +   +S     R
Sbjct: 863  EVVVKKEVDEEERLENHTSVKIKREA--EDRDEDERSFHSNGAKEEDEDKPSVSPLTSPR 920

Query: 190  NKTKGAAGRGEKNLPVHSH*AADHRGSLRSTNSDRKARNS 309
               +  AG   +N    S  ++D  G+ RSTN DRK   S
Sbjct: 921  QPAETHAGSPCRNSA--SPASSDRSGTPRSTNGDRKPGGS 958


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -3

Query: 318 CTPRVPGLSVG-VCRTK 271
           CTPR PG++ G VC ++
Sbjct: 101 CTPREPGVAGGDVCSSE 117


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 246 MRMNREIFFSSSSCSLGLVALQLGIAQTEVFALLLDGEVGSRSL 115
           +R   E+F S  SC   +      +   EVF  + + +V  RSL
Sbjct: 88  LRYFEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAFRSL 131


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 246 MRMNREIFFSSSSCSLGLVALQLGIAQTEVFALLLDGEVGSRSL 115
           +R   E+F S  SC   +      +   EVF  + + +V  RSL
Sbjct: 88  LRYFEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAFRSL 131


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 222 FSSSSCSLGLVALQLGIAQTEVFALLLDG 136
           F  + CSLG+       A T  + + +DG
Sbjct: 513 FDGNDCSLGINPWANCTASTRCWEVFMDG 541


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 93  PGHERMPARTGTQLHHPKEE 152
           P ++RM  R    LH P+++
Sbjct: 85  PPYDRMDIRDRRSLHGPQQQ 104


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 224 FSPLPAAPLVLLRSSWALLKPKFSL 150
           ++P    PL+ L  +W  L P++ L
Sbjct: 489 WNPKDCDPLITLIETWMPLLPQWIL 513


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B
          protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 33 ALFLIFDFAH 4
          ALFL FD  H
Sbjct: 14 ALFLFFDLCH 23


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A
          protein.
          Length = 717

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 33 ALFLIFDFAH 4
          ALFL FD  H
Sbjct: 14 ALFLFFDLCH 23


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 109 CQQGPGPNFTIQKKSENFGLSNAQLE 186
           C    GPN T+Q  +    LS+   E
Sbjct: 18  CNWSSGPNATLQSSACTDDLSSCWSE 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.128    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,376
Number of Sequences: 336
Number of extensions: 1295
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)