Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31197
(323 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29515| Best HMM Match : TolA (HMM E-Value=0.031) 35 0.017
SB_36946| Best HMM Match : ResIII (HMM E-Value=0.47) 33 0.070
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.093
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.093
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 31 0.16
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 31 0.28
SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.28
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 31 0.28
SB_35941| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.38
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.38
SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.66
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 29 0.66
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.66
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.66
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 29 0.66
SB_9788| Best HMM Match : Seryl_tRNA_N (HMM E-Value=4.9) 29 0.66
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.87
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 29 0.87
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.87
SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.87
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.87
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 1.1
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.5
SB_38433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.5
SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 28 2.0
SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58) 28 2.0
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 28 2.0
SB_14692| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_5750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 28 2.0
SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 27 2.6
SB_19577| Best HMM Match : SERTA (HMM E-Value=7.8e-10) 27 2.6
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 27 2.6
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_48517| Best HMM Match : DUF866 (HMM E-Value=1.9) 27 3.5
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_21439| Best HMM Match : LicD (HMM E-Value=4.5e-08) 27 3.5
SB_17568| Best HMM Match : Ldl_recept_a (HMM E-Value=0.04) 27 3.5
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_7313| Best HMM Match : IQ (HMM E-Value=0.00059) 27 4.6
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 27 4.6
SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22) 27 4.6
SB_18786| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 26 6.1
SB_49384| Best HMM Match : GNT-I (HMM E-Value=0) 26 6.1
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 26 6.1
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 26 6.1
SB_24800| Best HMM Match : DUF866 (HMM E-Value=4) 26 6.1
SB_24366| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 26 6.1
SB_44274| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012) 26 6.1
SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39) 26 6.1
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 26 6.1
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_2860| Best HMM Match : IncA (HMM E-Value=0.41) 26 6.1
SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17) 26 8.1
SB_45896| Best HMM Match : ApoC-I (HMM E-Value=4) 26 8.1
SB_45045| Best HMM Match : Kinesin (HMM E-Value=0) 26 8.1
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 26 8.1
SB_27235| Best HMM Match : ApoC-I (HMM E-Value=4) 26 8.1
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 26 8.1
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_21999| Best HMM Match : ApoC-I (HMM E-Value=4) 26 8.1
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 26 8.1
SB_3246| Best HMM Match : ApoC-I (HMM E-Value=4) 26 8.1
SB_59533| Best HMM Match : ApoC-I (HMM E-Value=4) 26 8.1
SB_52528| Best HMM Match : HLH (HMM E-Value=3.9e-18) 26 8.1
SB_44773| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_31678| Best HMM Match : ApoC-I (HMM E-Value=4) 26 8.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 26 8.1
>SB_29515| Best HMM Match : TolA (HMM E-Value=0.031)
Length = 592
Score = 34.7 bits (76), Expect = 0.017
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQ 180
R +E+E K++ E KR++LEEAE+ + L+A + ++ ++++E +
Sbjct: 340 RRQEVERKRREREEAKRKQLEEAERLERVRLEAEEEMKRREEERRKKREEAERERKRKEE 399
Query: 181 LERNKTKGAAGRGEK 225
ERN+ K R E+
Sbjct: 400 EERNREKQEKARLER 414
>SB_36946| Best HMM Match : ResIII (HMM E-Value=0.47)
Length = 979
Score = 32.7 bits (71), Expect = 0.070
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 322 TMHSQSSWPFCRSLSNEETLDGQRLN 245
T+HS S+ P C+SL N + LD RLN
Sbjct: 792 TIHSASAVPACQSLKNYKKLDSSRLN 817
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 32.3 bits (70), Expect = 0.093
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQ 84
RE E +KQR+ EE++Q+ +E EKKR+
Sbjct: 476 REEEERKQREEEERKQKEKEEEKKRK 501
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQ 84
R RE E +KQR+ EE+++R EE K+R+
Sbjct: 459 RKREEEERKQRE-EEEKKREEEERKQRE 485
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLE 186
R E +++R+ EE++QR EE EKKR+ + + ++ +KK + + + E
Sbjct: 453 RREEEERKREEEERKQR-EEEEKKREEEERKQREEEERKQKEKEEEKKRKEEERKHKEEE 511
Query: 187 RNKTK 201
KT+
Sbjct: 512 EKKTE 516
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQ 84
R + E +K+R+ EE++QR EE K+++
Sbjct: 466 RKQREEEEKKREEEERKQREEEERKQKE 493
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 32.3 bits (70), Expect = 0.093
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +1
Query: 16 EYKKQRD--IEEKRQRLEEAEKKRQAMLQAMK 105
E +K +D +EE+R+RLE EK+RQA QAM+
Sbjct: 310 EKQKLQDKILEEERKRLENLEKERQAAQQAMQ 341
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 31.5 bits (68), Expect = 0.16
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 4 VREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQL 183
V + +K+R +EE++ RL+E E++R+ + K + G P+ +++ S G ++
Sbjct: 587 VHAVADQKERLLEEEKVRLKEEEEERKKQEERKKAKEAGRRPS-PVKRVSRIPGNDQPRV 645
Query: 184 ERNKT---KGAAGRGEKNLPVHSH*AADHRGSLRSTNSDRKAR 303
R + K + G+KN S + R +++ S AR
Sbjct: 646 SREDSRTRKSSRDNGDKNQEGRSRTLSRGREPTKTSLSKSPAR 688
Score = 29.1 bits (62), Expect = 0.87
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQ 84
+++E ++ +EE+R+R EEAEKKR+
Sbjct: 242 KKLEEEEANLMEEERKRKEEAEKKRE 267
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSE 156
R +E ++QR+ EE+R++ EEAE++R+ + K Q+ +QK+ +
Sbjct: 623 RQQEQMLQRQREEEERRRQQEEAERQRREQEEVFKQ-QEQQRQQLELQKRQQ 673
>SB_30819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKR 81
R REIE +Q +EE++QRL++ E KR
Sbjct: 12 REREIERHRQALLEEEKQRLKDEEDKR 38
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAML 93
R R + +K R + ++QRL E E+KRQAM+
Sbjct: 652 RKRREKEEKDRQFQLEKQRLAEEEQKRQAMI 682
Score = 29.1 bits (62), Expect = 0.87
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
R +E E +K+RD EE+++R E+ EK RQ L+ +
Sbjct: 637 RRKEEEEQKKRDEEERKRR-EKEEKDRQFQLEKQR 670
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/32 (34%), Positives = 24/32 (75%)
Frame = +1
Query: 10 EIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
E+E +K+R+ EE++++ EE E+KR+ ++ +
Sbjct: 607 ELE-RKRREEEERKRKQEEEERKRKMQMELQR 637
>SB_35941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 322 TMHSQSSWPFCRSLSNEETLDGQRLN 245
T+HS + P C+SL N + LD RLN
Sbjct: 95 TIHSALAVPACQSLKNYKKLDSSRLN 120
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 22 KKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKS 153
+KQR+ EEK++R E EK Q K Q G P FT Q +S
Sbjct: 1589 EKQREEEEKKRRTE--EKAAQRGDAKFKKNQPGKAPRFTKQHQS 1630
>SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +1
Query: 22 KKQRDIEEKRQRLEEAE-KKRQAMLQAMKGCQQGPGPNFTIQ 144
+++R+ +EK+Q+ EEAE +K+QA+L+ ++ + F I+
Sbjct: 57 RRRREEQEKKQKEEEAERRKKQAILEKLEVIKMATNNLFIIK 98
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 29.5 bits (63), Expect = 0.66
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLE-EAEKKRQAMLQAMK 105
R +E K+R EE+RQR + EAE++RQA L+ +
Sbjct: 119 REKEEREAKERAEEERRQRAKMEAEQRRQAELEKQR 154
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
R RE E + R IEEK+++LEE E+ ++ + + K
Sbjct: 279 RKREKELEMLRQIEEKKRKLEEEERIKEEVEKQKK 313
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 4 VREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQ 117
++EI Y +Q+D +E + E K A+ Q M+GC++
Sbjct: 308 IQEITYGRQKDSQESTETNIENANKDIAVEQGMEGCKK 345
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGP 129
++RE+E K Q D EE+ ++ E+ ++ +A +AM+ P P
Sbjct: 182 QIRELETKLQ-DAEERAEKAEQKVQELEAQAEAMEAVLAFPSP 223
>SB_9788| Best HMM Match : Seryl_tRNA_N (HMM E-Value=4.9)
Length = 149
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFT---IQKKSENFGLS 171
R+ EYK+ + ++++R+ L ++KK++ +G P + +++K E
Sbjct: 61 RINNAEYKESQAVKKRRKLLRGSKKKKKKGRNTKEGGPPSANPGYAPACVREKKEEGAKE 120
Query: 172 NAQLERNKTK 201
A+ E+ K
Sbjct: 121 EAKREKKLEK 130
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 29.1 bits (62), Expect = 0.87
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQ 180
R RE E +++R+ E +R+R E E+KR A + + +G N K +
Sbjct: 250 RERERERERERERERERERERERERKRYACVS--ETSTRGEPSNLNGSDKCIDLFGDLPP 307
Query: 181 LERNKTKGAAGRGEK 225
LE ++++G + E+
Sbjct: 308 LESSESRGEKRKAEE 322
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 16 EYKKQRDIEEKRQRLEEAEKKRQAM 90
E ++QR+I+ +RQ L++ E KRQAM
Sbjct: 561 EERRQREIQRRRQELQDIE-KRQAM 584
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQ 117
+++E +KQ+ +EE+R R + E+KR+ Q + QQ
Sbjct: 161 KQLEVEKQKRLEEERIRSQNEERKRREREQKEREKQQ 197
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQ 84
RE + K + EE+R+R +E EKKR+
Sbjct: 193 REKQQKLDMEKEERRRRQQEEEKKRR 218
>SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 13 IEYKKQRDIEEKRQRLEEAEKKRQAM 90
IE ++QR +EEK+++ +E KK QAM
Sbjct: 78 IESEEQRKVEEKQEKEKEEFKKLQAM 103
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQA 99
R+ ++E ++Q+ +EE++++ EE E KR A L+A
Sbjct: 771 RMEQLEIQRQKKVEEQKKKREEKE-KRVAELRA 802
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
RV E+ ++QR++ EK+++L E +K + + K
Sbjct: 796 RVAELRAERQRELMEKKKQLLEKDKLISTLTEKAK 830
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
REI D+EEK + LEEA+ + +A+ MK
Sbjct: 513 REITDTVSTDLEEKAKELEEAKSENEAISGKMK 545
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 22 KKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
+++RD+E KRQ + E +++ + MLQ ++
Sbjct: 909 EQERDLERKRQEIAEHKRQEREMLQKLE 936
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 322 TMHSQSSWPFCRSLSNEETLDGQRLN 245
T+HS + P C+SL N + L+ RLN
Sbjct: 6678 TIHSALAVPACQSLKNYKKLNSSRLN 6703
>SB_38433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKR--QAMLQAMKGCQQ 117
RE E K QR EKRQ+ +E EK+R +A L +G Q+
Sbjct: 53 REEEKKSQR---EKRQKEKEEEKRRKEEAALSTWRGTQE 88
>SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 581
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGP 123
R+ EYK +RDI++KR+++ ++KR+ + K Q+GP
Sbjct: 538 RIYGAEYK-ERDIQKKRRKVLRGQRKRK---EDKKQQQEGP 574
>SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58)
Length = 696
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
+ + +Q+D EEK +RL E + +R+ + ++K
Sbjct: 550 KRLSLHQQKDFEEKIRRLTERDSQRKGQVDSLK 582
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 40 EEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLERNKTKGAAGRG 219
EE+RQ+ EEA K+R+ L + + +K E G + + ++ TKG
Sbjct: 1344 EERRQKREEARKRREEKLAKKESSKSS-----NKRKSKERSGNPSFKRIKSTTKGRETEV 1398
Query: 220 EKNLPV 237
K+ PV
Sbjct: 1399 TKDSPV 1404
>SB_14692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGP 123
R+ EYK +RDI++KR+++ ++KR+ + K Q+GP
Sbjct: 196 RIYGAEYK-ERDIQKKRRKVLRGQRKRK---EDKKQQQEGP 232
>SB_5750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGP 123
R+ EYK +RDI++KR+++ ++KR+ + K Q+GP
Sbjct: 237 RIYGAEYK-ERDIQKKRRKVLRGQRKRK---EDKKQQQEGP 273
>SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 351
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGP 123
R+ EYK +RDI++KR+++ ++KR+ + K Q+GP
Sbjct: 308 RIYGAEYK-ERDIQKKRRKVLRGQRKRK---EDKKQQQEGP 344
>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 147 EERKLRFEQCPAGAQQDQGSSWKRRKKSPCS 239
+E K + + CPA ++ S+W+R P S
Sbjct: 617 QEEKCQTKACPANRSGNRSSNWRRHLHPPSS 647
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAE--KKRQAMLQAMKGCQQGP 123
+V E++ KK++ +E + Q LEE K+++ + A K ++ P
Sbjct: 5196 KVEEVKPKKEKPMEREAQHLEEKPLLKEKELPVSAEKAIEEKP 5238
>SB_19577| Best HMM Match : SERTA (HMM E-Value=7.8e-10)
Length = 543
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 113 SKDRDPTSPSKRRAKTSV*AMPSWSATRPRE-QLEEEKKISLFIRIK 250
+K RD S KRRA S P W A + E + + L R K
Sbjct: 136 AKQRDTASAGKRRASASTATQPVWLAVEEDSINILEGESLRLMCRYK 182
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 10 EIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSE 156
E E +++ D E KR+ EEAE+ R + K Q+G +K+ E
Sbjct: 460 EEENRRKADEERKRKEQEEAERNRVVQEEKRKIEQEGKQRKKESRKQEE 508
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 1 RVREIEYKKQ--RDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
RV E++ K Q + IEE+ Q+ +EAE+K+ ++ + ++ +K++E +
Sbjct: 304 RVEEMQRKTQEKKRIEEEEQKRKEAEEKKAKEIEQRRMEEEIKKEEEKKRKEAEEKRVKE 363
Query: 175 AQLERNKTK 201
Q+ K +
Sbjct: 364 EQIRLEKER 372
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQ 84
R RE++ KK+RD E+KR++ EE ++ +
Sbjct: 995 RERELQRKKERD-EQKRKKEEEKREREE 1021
>SB_48517| Best HMM Match : DUF866 (HMM E-Value=1.9)
Length = 434
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + KR+ L KK++ + +G PG
Sbjct: 391 RVRLAEYKSKEASKRKRKVLRGKRKKKEDKKKQAEGSLYDPG 432
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQ 180
R +E+E + +D+ EKR R + + +L A + CQ + +QK+ F +
Sbjct: 1027 RTQEVEPQWMKDLSEKR-RKGQGRRFSAEILSADEQCQPTLSRDDEVQKEVPGFLKEFEK 1085
Query: 181 LERNK 195
RNK
Sbjct: 1086 KRRNK 1090
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQ 180
R +E E +K+R +EK ++ E EK++Q + + +Q +K+ E L +
Sbjct: 327 REKEKEREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQKE---LERKE 383
Query: 181 LERNKTK 201
L+R K +
Sbjct: 384 LQRQKER 390
>SB_21439| Best HMM Match : LicD (HMM E-Value=4.5e-08)
Length = 362
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 303 PGLSVGVCR-TKRPSMVSGLMRMNREIFFSSSSCSLGLVALQLGIAQTEVFALLLDG 136
P + G R + +M+S LMR R +F C L + + LG +T L+ G
Sbjct: 28 PNANAGKGRLVEEENMISNLMRKQRVLFLCLLLCILLVTFINLGALKTPTRFLVSQG 84
>SB_17568| Best HMM Match : Ldl_recept_a (HMM E-Value=0.04)
Length = 189
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
R EIE KQ+ +E+ R +LE+ +K+ A LQA K
Sbjct: 136 RRHEIELAKQKKLEDLRLQLEQ-KKQVVAELQATK 169
>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQ 84
R REI +++R+ EE +++ EEA +R+
Sbjct: 724 REREIREREEREWEENKRKHEEARLQRE 751
>SB_7313| Best HMM Match : IQ (HMM E-Value=0.00059)
Length = 104
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +1
Query: 10 EIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKG 108
+ E ++Q++ EE+++R EEA+++ + + A G
Sbjct: 61 QAEKERQKEEEERKRRKEEAKRRARILEAAFDG 93
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 127 PNFTIQKKSENFGLSNAQLERNKTK 201
P T + EN GLSN L ++KTK
Sbjct: 498 PTPTSSQTQENIGLSNGTLTQDKTK 522
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 26.6 bits (56), Expect = 4.6
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +1
Query: 16 EYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLERNK 195
E + Q +EEKR E+ K+++ Q G ++ G +KK E S+ +L +
Sbjct: 1226 EKEMQALLEEKRLEEEKNAKRKRPGQQGGPGSKEKKGHEEKKEKKPEK---SSDKLSSGR 1282
Query: 196 TKGAAGRGEKNLPVHSH*AADHRGSLRSTNSD 291
A + + NL + A S RS +SD
Sbjct: 1283 VTAVASQAQ-NLEAQTRGGAPSVISERSDSSD 1313
>SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22)
Length = 350
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/32 (34%), Positives = 23/32 (71%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQ 96
R++ E +++ EE+R R+EE +++++ MLQ
Sbjct: 107 RIQAEEEARRKAEEEERIRIEEIKRQQEKMLQ 138
>SB_18786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 234 REIFFSSSSCSLGLVALQLGIAQTEVFALLLDGEVGSRSLLAS 106
+++F + ++ S GLV+ AQ+ V LL G+V S L S
Sbjct: 722 QKVFVTQAAASTGLVSSSGKPAQSVVTTRLLSGQVPSSGLTTS 764
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
R E KKQ D E+++++ AEK+++A + G ++ G
Sbjct: 247 RAAESKKQEDEEKEKEKQLVAEKRQKAFWLSGTGREKSGG 286
>SB_49384| Best HMM Match : GNT-I (HMM E-Value=0)
Length = 361
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 212 PAAPLVLLRSSWALLKPKFSLFFW 141
P +L +S W LKPK+ L FW
Sbjct: 218 PGLGWMLTKSIWNELKPKWPLGFW 241
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 320 DALPEFLAFLSEFVERRDPRWSAA 249
++L L+ L E ++RRD RWSAA
Sbjct: 900 ESLKAQLSELQEEMKRRDSRWSAA 923
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 10 EIEYKKQRDIEEKRQRLEEAEKKRQA 87
E E KK+RD ++ R EEAE ++QA
Sbjct: 1063 ETETKKERDQTDQAIRDEEAELEKQA 1088
>SB_24800| Best HMM Match : DUF866 (HMM E-Value=4)
Length = 393
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L+ KK++ + +G PG
Sbjct: 350 RVRLAEYKSKEASKRRRKVLKGKRKKKEDKKKQAEGSLYDPG 391
>SB_24366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEK-RQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNA 177
+V+ +++ ++ + E+ R LEE E+K+Q + + + ++G +KK N +SN
Sbjct: 93 KVKRLDFLREESMHEQARMFLEEREEKKQELSEVI---EEGRKRKRNRRKKG-NGNVSNM 148
Query: 178 QLERNKTKGAAGRGEKNLPVHS 243
+ + G +N +HS
Sbjct: 149 TEKVTRLDGECNNTTRNHILHS 170
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 40 EEKRQRLEEAEKKRQAMLQAMKG 108
EE+RQ+ EEA K+R+ L A KG
Sbjct: 537 EERRQKREEARKRREEKL-AKKG 558
>SB_44274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 34 DIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLERNKTK 201
D+ + LE K ++ +Q +K C P P + +K N LS+ + + K
Sbjct: 311 DLGAEHVLLESMPKHKELWMQWLKQCPHTPKPLKKMNEKEVNKWLSSTEFQEFSKK 366
>SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)
Length = 1119
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 13 IEYKKQRDIEEKRQRLEEAEKKRQA 87
IE +Q++ E +R R E EK+RQA
Sbjct: 351 IEDMRQKEAERQRVREAEEEKRRQA 375
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 1 RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQ 96
R R+ K++ D +++KR R EE +++RQ LQ
Sbjct: 647 RFRQESLKREADELMQQKRIREEELQRRRQQALQ 680
>SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39)
Length = 258
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 113 SKDRDPTSPSKRRAKTSV*AMPSWSATRPR-EQLEEEKKISLFIRIK 250
S + PT P+ R+A+ S+ PS+S +R + Q + + + + R K
Sbjct: 196 SAEASPTQPTVRKAEHSIEPNPSYSKSRGKTAQASQHSRGASYFRKK 242
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQA 87
+E E KK+++ EE+R+ +E K+QA
Sbjct: 932 KEEEEKKEKEAEERRRAEDEERIKKQA 958
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQ 117
R R+ + ++QR + +RQR + +++RQ Q ++ Q+
Sbjct: 57 RQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRLRQRQR 95
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPN 132
R R+ + ++QR + +RQR + ++RQ + Q + QQ N
Sbjct: 67 RQRQRQRQRQRQRQRQRQRQRQRLRQRQRLRQRQRQRQQQRNDN 110
>SB_2860| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 417
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 10 EIEYKKQRDIEEKRQRLEE----AEKKRQAMLQAMKGCQQG--PGPNFTIQKKSENFGLS 171
E+E K RD+E+++QRL E AEK+ Q ++ P +Q + + +
Sbjct: 185 EMERSKVRDLEQQKQRLVEQLYAAEKRYQDKENEFMTHKERELSKPEVKLQSELDFLRVE 244
Query: 172 NAQLER 189
A+LER
Sbjct: 245 KAELER 250
>SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17)
Length = 714
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +1
Query: 7 REIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMK 105
RE +K+R++E +RQR+++ E+ +++ ++
Sbjct: 156 REARAEKERELEMERQRIKKKEQDLNRLMKIVE 188
>SB_45896| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 104
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 61 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 102
>SB_45045| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1260
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/79 (20%), Positives = 34/79 (43%)
Frame = +1
Query: 10 EIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLER 189
E+E+ ++ EKR+ L +++R + Q++ G G + K + + LS
Sbjct: 675 ELEHLRRELQAEKRRSLALEQRERDILEQSIAGGSHGLSETEDVHKDAGDIELSEGHRTN 734
Query: 190 NKTKGAAGRGEKNLPVHSH 246
++ +P+ SH
Sbjct: 735 CQSPEHLAPQFPQIPIDSH 753
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 174 CPAGAQQDQGSSWKRRKKSPC 236
CPAG + G W R + PC
Sbjct: 2458 CPAGFYHNAGRIWNRTQCMPC 2478
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 19 YKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGP 123
YK Q+++EEKRQR A+ + A Q G Q P
Sbjct: 570 YKIQKELEEKRQRRLLAQMRTTAAPQV--GQNQAP 602
>SB_27235| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 158
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 115 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 156
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/72 (19%), Positives = 37/72 (51%)
Frame = +1
Query: 13 IEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSNAQLERN 192
IE +++ E ++++L+E+ + ++++ G K+ + +SN Q ++
Sbjct: 532 IEDNEKKRKETEKKKLKESIESFDTSVESIGSNSTGSPGRDKSDKQRKITQISNGQEDKE 591
Query: 193 KTKGAAGRGEKN 228
G+ GRG+++
Sbjct: 592 LRTGSQGRGDED 603
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQ 84
R RE E KK RD EKR+R E K R+
Sbjct: 216 RKREKEEKK-RDKSEKRERSRERSKDRK 242
>SB_21999| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 104
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 61 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 102
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 116 KDRDPTSPSKRRAKTSV*AMPSWSATRPREQLEEEKK 226
+D+ T P+ R KTS A RPRE + K+
Sbjct: 178 QDKQATRPTSHRIKTSKLQDQDKQAARPREASHKTKR 214
>SB_3246| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 75
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 32 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 73
>SB_59533| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 75
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 32 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 73
>SB_52528| Best HMM Match : HLH (HMM E-Value=3.9e-18)
Length = 138
Score = 25.8 bits (54), Expect = 8.1
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQA--MKGCQQGPGPNFTIQKKSENFGLSN 174
R+ + +++ E +R R+++ + + ++ ++ P TI+ +
Sbjct: 29 RLTGVSKQRRTANERERNRVQQVNAAFETLRNKIPLRALEKKPSKIDTIRLATRYIQDLT 88
Query: 175 AQLERNKTKGA-AGRGEKNLPVHSH*AADHRGSLRSTNSDRKARNSGSAS 321
L +T+G N V+S ADH GSL S+ +D+ + +S
Sbjct: 89 QLLSLAETEGRITSPSSSNGSVYSSTIADHDGSLYSSTTDQDGKTDEDSS 138
>SB_44773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 61 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 102
>SB_31678| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 298
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 1 RVREIEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPG 126
RVR EYK + + +R+ L KK++ + +G PG
Sbjct: 255 RVRLAEYKSKEASKRRRKVLRGKRKKKEDKKKQAEGSLYDPG 296
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 16 EYKKQRDIEEKRQRLEEAEKK 78
E+ QRD E+RQ+ E+ EK+
Sbjct: 582 EFHLQRDATERRQKAEQLEKE 602
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,486,438
Number of Sequences: 59808
Number of extensions: 183399
Number of successful extensions: 814
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 438034835
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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