Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31197
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   0.92 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   0.92 
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   0.92 
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   0.92 
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   0.92 
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   0.92 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   0.92 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   0.92 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   0.92 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   6.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   6.5  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 13  IEYKKQRDIEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQK 147
           ++  KQ  +EE RQR  +A    + ++ A K   + P    T+QK
Sbjct: 44  VKQTKQSVLEEARQRANDAGLTEEEVVLA-KTIAECPESENTVQK 87


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   RVREIEYKKQRD--IEEKRQRLEEAEKKRQAMLQAMKGCQQGPGPNFTIQKKSENFGLSN 174
           R +E   +++R+  I+++R+R  E  KK+  +   ++  ++      +  +  E+ G SN
Sbjct: 30  RTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSN 89

Query: 175 A 177
           A
Sbjct: 90  A 90


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 122  GPCWHPFM 99
            GPCWH  M
Sbjct: 1464 GPCWHAVM 1471


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 147 EERKLRFEQCPAGAQQDQGSSWKRRKKSPCSFAL 248
           E+R L      AG QQ    +    KKS  +FAL
Sbjct: 283 EQRILSGYHAIAGGQQRPDENVVTDKKSKVNFAL 316


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 19  YKKQRDIEEKRQRLEEAEKKR 81
           YK +R+  + R+R +E  + R
Sbjct: 283 YKNEREYRKYRERSKERSRDR 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.128    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,203
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)