Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31196
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724...    31   0.67 
04_04_1054 + 30437468-30437763,30438647-30438779,30439099-304391...    29   2.7  
07_01_0878 + 7288950-7289231                                           28   4.7  
02_01_0428 - 3127098-3129254                                           28   4.7  
03_01_0403 - 3133568-3134440,3135131-3135494,3136341-3136408,313...    27   8.2  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    27   8.2  

>09_02_0322 -
           7240125-7241568,7242043-7243253,7245782-7246144,
           7246502-7246522
          Length = 1012

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 356 QHCSPARREAYHSPCQSHPHTLPARWS 436
           +H   + RE  H   Q HP  LP+RWS
Sbjct: 712 KHPPDSHREIAHDKQQQHPDVLPSRWS 738


>04_04_1054 +
           30437468-30437763,30438647-30438779,30439099-30439159,
           30439370-30439483,30439813-30439971,30440124-30440206,
           30440423-30440549,30440872-30440951,30441027-30441113,
           30441316-30441440,30441543-30441603,30441806-30441859,
           30441946-30442023,30442449-30442554,30442655-30442803,
           30442945-30443052
          Length = 606

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +1

Query: 1   ITTGNACLFGNLPV----SDSGAGRRNWKVH 81
           ++TG  CL G+ PV      SG+G  NW VH
Sbjct: 250 VSTGAVCLDGSPPVYHFSPGSGSGANNWLVH 280


>07_01_0878 + 7288950-7289231
          Length = 93

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 105 KLGLYWKGVYFPVSAASATVRDRQIAKKTRISRC 4
           K G   +   FPVSA +  V  R++A   R+SRC
Sbjct: 42  KAGAGARAAAFPVSAQAQMVVQRELAAVGRLSRC 75


>02_01_0428 - 3127098-3129254
          Length = 718

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 421 ASKVVTPTYVASXVVPPSGAGYDYKYGIIRYDNDVAPEGY 540
           A  ++ PTY++S    P+   + Y+Y I+R + +VA  G+
Sbjct: 523 ARVLILPTYMSSKKDLPALKDWKYEYRILRAEVNVARNGF 562


>03_01_0403 -
           3133568-3134440,3135131-3135494,3136341-3136408,
           3137184-3137857,3138093-3138105
          Length = 663

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 57  WPPKLESTLLSSTTRVYSTVSPFVYKPGRY 146
           WPP L  +    T   Y TV+P     GRY
Sbjct: 581 WPPALSFSPYRDTASYYVTVAPAKLSRGRY 610


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 472 WVGPXCWQRMWV*P 431
           W    CWQRMWV P
Sbjct: 14  WPTASCWQRMWVHP 27


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,533
Number of Sequences: 37544
Number of extensions: 266015
Number of successful extensions: 838
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)