Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31195
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   4.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   7.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   9.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   9.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   9.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   9.2  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -3

Query: 221 LDVTNDFPLSGGGERVTPLGEDFHEVVGQVATSQVQTEDGVGQSVTFV 78
           LD+  +FP +   +  + LG  +H V   VA  +V  E+       FV
Sbjct: 151 LDLAWEFPENKPKKIRSKLGSIWHSVKKTVAGDKVLDENAAEHREQFV 198


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 55  VSPTPYPSTKVTLCPTPSSVWT 120
           +SP  +P+T   +   P+SV T
Sbjct: 450 ISPEVFPNTNNAIMTPPASVQT 471


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 55  VSPTPYPSTKVTLCPTPSSVWT 120
           +SP  +P+T   +   P+SV T
Sbjct: 398 ISPEVFPNTNNAIMTPPASVQT 419


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -1

Query: 241 GDIAEFLLMSRTISLSAVVVNE*PLSVRIFMR 146
           GD+  F   +    L ++++N    +  IF+R
Sbjct: 8   GDVETFAFQAEIAQLMSLIINTFYSNKEIFLR 39


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 262 GHRWRLHLPREVLRA 306
           GH W+  +  E +RA
Sbjct: 117 GHEWQADVSEEAVRA 131


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 113 SGLGWSRLDRLPHENPHR 166
           S +GWS       ++PHR
Sbjct: 83  SSVGWSPAGHEEAQSPHR 100


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 93  ERNLRRWVRCG 61
           ERN   WVR G
Sbjct: 154 ERNSNHWVRSG 164


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 93  ERNLRRWVRCG 61
           ERN   WVR G
Sbjct: 110 ERNSNHWVRSG 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,560
Number of Sequences: 336
Number of extensions: 1647
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)