Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31195
(370 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 8e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 177 2e-45
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 177 2e-45
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 4e-45
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 4e-45
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 147 3e-36
SB_54| Best HMM Match : Actin (HMM E-Value=0) 133 4e-32
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 3e-25
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 108 2e-24
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 68 2e-12
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 61 3e-10
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 47 5e-06
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 40 5e-04
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.13
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.17
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.89
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 1.6
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 27 3.6
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 4.8
SB_59126| Best HMM Match : zf-A20 (HMM E-Value=4.4) 27 6.3
SB_44810| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 6.3
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 27 6.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 26 8.3
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 26 8.3
SB_32653| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_7863| Best HMM Match : Pentaxin (HMM E-Value=1.8) 26 8.3
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 26 8.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_43523| Best HMM Match : GRP (HMM E-Value=0.013) 26 8.3
SB_20138| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 26 8.3
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 179 bits (435), Expect = 8e-46
Identities = 89/122 (72%), Positives = 94/122 (77%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 141 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK A ++ GQVITIGNERFRCPEA
Sbjct: 201 TTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEA 260
Query: 363 LF 368
+F
Sbjct: 261 MF 262
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 177 bits (431), Expect = 2e-45
Identities = 88/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 141 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIGNERFRCPEA
Sbjct: 201 TTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEA 260
Query: 363 LF 368
+F
Sbjct: 261 MF 262
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 177 bits (431), Expect = 2e-45
Identities = 88/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEA 261
Query: 363 LF 368
+F
Sbjct: 262 MF 263
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 176 bits (429), Expect = 4e-45
Identities = 87/122 (71%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF
Sbjct: 104 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 163
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIGNERFRCPEA
Sbjct: 164 TTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEA 223
Query: 363 LF 368
+F
Sbjct: 224 MF 225
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 176 bits (429), Expect = 4e-45
Identities = 87/122 (71%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEA 261
Query: 363 LF 368
+F
Sbjct: 262 MF 263
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 147 bits (356), Expect = 3e-36
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSF
Sbjct: 20 SLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSF 79
Query: 183 TTTAEREIVRDIK 221
TTTAEREIVRDIK
Sbjct: 80 TTTAEREIVRDIK 92
Score = 29.9 bits (64), Expect = 0.67
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 218 QEKLCYVALDFEQEM 262
+EKLCYVALDF QE+
Sbjct: 92 KEKLCYVALDFYQEI 106
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 133 bits (322), Expect = 4e-32
Identities = 65/122 (53%), Positives = 79/122 (64%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
+LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF
Sbjct: 2186 ALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
+TAE++I+RD+K R+ GQ I IG+ERFR E
Sbjct: 2246 QSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEP 2305
Query: 363 LF 368
LF
Sbjct: 2306 LF 2307
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 110 bits (265), Expect = 3e-25
Identities = 53/122 (43%), Positives = 73/122 (59%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F
Sbjct: 145 TLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAF 204
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TA+ E VR +K ++ + G+V+ + ERF PEA
Sbjct: 205 NHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEA 264
Query: 363 LF 368
LF
Sbjct: 265 LF 266
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 108 bits (259), Expect = 2e-24
Identities = 48/79 (60%), Positives = 65/79 (82%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F
Sbjct: 167 SLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
Query: 183 TTTAEREIVRDIKRNSAMS 239
+++E EIVR IK S S
Sbjct: 227 HSSSELEIVRTIKEESMES 245
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 72.5 bits (170), Expect = 1e-13
Identities = 53/121 (43%), Positives = 58/121 (47%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIV+DS G + H + I ERGYSF
Sbjct: 142 SLYASGRTTGIVMDS------------GDGVSHTV---------------PIYEERGYSF 174
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIGNERFRCPEA
Sbjct: 175 TTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEA 234
Query: 363 L 365
L
Sbjct: 235 L 235
Score = 61.7 bits (143), Expect = 2e-10
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +2
Query: 218 QEKLCYVALDFEQEMGTAGASTSLEKSYELPDG 316
+EKLCYVALDFEQEM TA +S+S+EKSYELPDG
Sbjct: 187 KEKLCYVALDFEQEMQTAASSSSIEKSYELPDG 219
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 68.1 bits (159), Expect = 2e-12
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYS 179
SLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG++
Sbjct: 771 SLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHN 830
Query: 180 FTTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPE 359
FT+++ +IV DIK ++ + GQ+I+IG E E
Sbjct: 831 FTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSME 890
Query: 360 ALF 368
LF
Sbjct: 891 PLF 893
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 60.9 bits (141), Expect = 3e-10
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 27 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 206
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMET 121
Query: 207 VRDIK 221
+ IK
Sbjct: 122 AKTIK 126
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +3
Query: 9 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 167
+A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 40.3 bits (90), Expect = 5e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 315 GQVITIGNERFRCPEALF 368
GQVI+IGNERFRCPEA+F
Sbjct: 19 GQVISIGNERFRCPEAMF 36
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.13
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 27 TGIVLDSGDGVSHTVPI 77
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 31.9 bits (69), Expect = 0.17
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 203 FPLSGGGERVTPLGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 36
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 35 DTGGTTGGVQ 6
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 29.5 bits (63), Expect = 0.89
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 167 LGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 24
L E +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 110 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 12
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.5 bits (58), Expect = 3.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 215 VTNDFPLSGGGE-RVTPLGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVE 39
V++D + E RV+ G + +G+V+ +DGVG+ D GVGD +G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 38 HDTGG 24
D GG
Sbjct: 145 SDDGG 149
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 4.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 61 PTPYPSTKVTLCPTPSSVW 117
PTP+P+T V +P S+W
Sbjct: 1373 PTPFPTTPVPPTTSPPSIW 1391
>SB_59126| Best HMM Match : zf-A20 (HMM E-Value=4.4)
Length = 860
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 184 PPPLRGKSFVTSRETLLCRPRLRAGNGHRWR 276
P P RG T ET LCRP G R R
Sbjct: 42 PVPCRGCGIGTQSETRLCRPCGANREGQRMR 72
>SB_44810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 113 TEDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 12
++DGVG VDG G G V D GG G
Sbjct: 30 SDDGVGGGYNGVDGDGDGSDGGVVNGDNGGGDNG 63
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2
Query: 53 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHENPHREGLLVHHHR*EGNRS 211
WC H+ R PR P G WS PH+ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 128 SRLDRLPHENPHREGLLVHHHR*EGNRS*HQEKLCYVALDFEQ 256
+R DR+ H++ RE +VH H R H+E V + EQ
Sbjct: 598 TREDRITHDHARREIGIVHDHTTREVRVAHEEATREVRVAHEQ 640
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 242 GRHSRVSLDVTNDFPLSGGG 183
GRH + D++ND L+GGG
Sbjct: 333 GRHDNFNDDISNDGNLNGGG 352
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 26.2 bits (55), Expect = 8.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 62 PHRTHLRRLRSAPRHPPSGLGW 127
PH + R+ + P HPP G+ W
Sbjct: 669 PHFSMAPRVAAQPPHPPPGVQW 690
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 58 SPTPYPSTKVTLCPTPS 108
+PTP P K T PTPS
Sbjct: 223 APTPPPPVKTTAAPTPS 239
>SB_32653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 132 DLTDYLMKILTERGYSFTTTAEREIVRDIKRN 227
D+T LM+I++ GY T TA+ ++ N
Sbjct: 220 DVTKALMEIISRHGYPETITADNNPFNSVEMN 251
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 58 SPTPYPSTKVTLCPTPSS 111
+PTPYP TK CP +S
Sbjct: 260 NPTPYPCTKGHYCPKGTS 277
>SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 26.2 bits (55), Expect = 8.3
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = -3
Query: 194 SGGGERVTPLGEDFHEVVGQVATSQVQTEDGVGQSV--TFVDGYGVGDTIS--GVEHDTG 27
SG G+D+ + G A + V +G +V DG G G + S G E D G
Sbjct: 65 SGAARTGGGTGDDWANIDGCGAATCVGAVLDIGTAVGGANTDGGGAGGSTSVGGAETDGG 124
Query: 26 GTTGG 12
G GG
Sbjct: 125 GADGG 129
>SB_7863| Best HMM Match : Pentaxin (HMM E-Value=1.8)
Length = 604
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 98 GQSVTFVDGYGVGDTISGVEH-DTGGTTGGV 9
G S++ +D G+T+S ++H D G T G+
Sbjct: 419 GNSLSEIDNSDNGNTLSEIDHSDNGNTLSGI 449
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -3
Query: 62 GDTISGVEH-DTGGTTGGV 9
G+T+SGVEH D G T G+
Sbjct: 467 GNTLSGVEHSDNGNTLSGI 485
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 149 EVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEH 36
+VV Q+ Q++ D + + F+D +GD G H
Sbjct: 759 DVVSQLMDKQIEVNDVIDEGNKFLDDTSIGDDERGDIH 796
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 68 GVGDTISGVEHDTGGTTGGV 9
G G T SGV +G TTGGV
Sbjct: 598 GSGTTTSGVNTGSGTTTGGV 617
>SB_43523| Best HMM Match : GRP (HMM E-Value=0.013)
Length = 446
Score = 26.2 bits (55), Expect = 8.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 110 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTT 18
+DG G DG GVG G HD GG T
Sbjct: 262 DDGDGSGHDDGDGSGVGFRNDGDGHDGGGET 292
>SB_20138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 860
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = -3
Query: 227 VSLDVTNDFPLSGGGERVTPLGEDFHEVVGQVATSQVQTEDGVGQSVTFVD 75
V++DV S G + +G FH+V G V+ + +++ +S+ V+
Sbjct: 625 VTMDVVEYPKSSPGSQYCLVMGRSFHDVAGVVSFKKPESDGASERSIRTVN 675
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 26.2 bits (55), Expect = 8.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 33 IVLDSGDGVSHTVPIYEGYALPHAILR 113
+V+D+G +H VP++ G + A+ R
Sbjct: 359 LVVDTGYSFTHIVPVFNGKVIKKAVRR 385
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,937,004
Number of Sequences: 59808
Number of extensions: 243374
Number of successful extensions: 850
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 594991920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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