Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31195
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 178 9e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 178 9e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 178 1e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 178 1e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 178 1e-45
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 178 1e-45
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 177 2e-45
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 177 2e-45
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 177 2e-45
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 177 2e-45
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 109 6e-25
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 107 2e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 62 2e-10
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 51 2e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 30 0.59
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 29 0.79
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 28 2.4
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 28 2.4
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 4.2
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 4.2
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 4.2
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 27 5.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 26 7.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 178 bits (434), Expect = 9e-46
Identities = 89/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
LF
Sbjct: 262 LF 263
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 178 bits (434), Expect = 9e-46
Identities = 89/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
LF
Sbjct: 262 LF 263
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 178 bits (433), Expect = 1e-45
Identities = 88/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
LF
Sbjct: 262 LF 263
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 178 bits (433), Expect = 1e-45
Identities = 88/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 98 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 158 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 217
Query: 363 LF 368
LF
Sbjct: 218 LF 219
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 178 bits (433), Expect = 1e-45
Identities = 88/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 128 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 188 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 247
Query: 363 LF 368
LF
Sbjct: 248 LF 249
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 178 bits (433), Expect = 1e-45
Identities = 88/122 (72%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
LF
Sbjct: 262 LF 263
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 177 bits (431), Expect = 2e-45
Identities = 87/122 (71%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
+F
Sbjct: 262 MF 263
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 177 bits (431), Expect = 2e-45
Identities = 87/122 (71%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
+F
Sbjct: 262 MF 263
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 177 bits (431), Expect = 2e-45
Identities = 87/122 (71%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
+F
Sbjct: 262 MF 263
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 177 bits (431), Expect = 2e-45
Identities = 87/122 (71%), Positives = 93/122 (76%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 363 LF 368
+F
Sbjct: 262 MF 263
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 171 bits (415), Expect = 2e-43
Identities = 85/122 (69%), Positives = 90/122 (73%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+F
Sbjct: 141 SLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK + GQVITIGNERFRCPE
Sbjct: 201 TTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEV 260
Query: 363 LF 368
LF
Sbjct: 261 LF 262
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 109 bits (262), Expect = 6e-25
Identities = 53/122 (43%), Positives = 73/122 (59%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
+A+ E VR +K ++ + G+VI +G ERF PE
Sbjct: 205 NHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEI 264
Query: 363 LF 368
LF
Sbjct: 265 LF 266
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 107 bits (258), Expect = 2e-24
Identities = 57/122 (46%), Positives = 74/122 (60%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 145 SLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
+ E EIVR++K N+ ++ T+ I I N FR PE
Sbjct: 205 HRSNEFEIVREMKENACYLALDPTKVENNSVKSSYALPDTT-----KIEISNSLFRAPEV 259
Query: 363 LF 368
LF
Sbjct: 260 LF 261
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 27 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 206
TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEV 230
Query: 207 VRDIK 221
+ IK
Sbjct: 231 AKMIK 235
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 51.2 bits (117), Expect = 2e-07
Identities = 20/56 (35%), Positives = 39/56 (69%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 170
S +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 164 SCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 41.5 bits (93), Expect = 2e-04
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = +3
Query: 6 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---Y 176
LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+ Y
Sbjct: 315 LYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLY 373
Query: 177 SFTTTAEREIVRDIKRNSAMSPS--TSSRKWXXXXXXXXXXXXTSFLTGQV-ITIGNERF 347
+F + E+ I+R + P K T Q I N RF
Sbjct: 374 AFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRF 433
Query: 348 RCPEALF 368
C E LF
Sbjct: 434 LCTEGLF 440
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 29.9 bits (64), Expect = 0.59
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 203 FPLSGGGERVTPLGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGY 69
F L+GG + D + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 144 YLMKILTERGYSFTTTAEREIVRDIKRNSAMSPSTSSRKW 263
YL LT T + +++V D+K +S SP +R W
Sbjct: 315 YLSTTLTGSVQPMTIASYQKVVNDLKNDSVSSPFVENRMW 354
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = +3
Query: 33 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 212
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 213 DIKRN 227
+ K +
Sbjct: 204 ECKED 208
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = +3
Query: 33 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 212
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 213 DIKRN 227
+ K +
Sbjct: 204 ECKED 208
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 167 LGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGYG 66
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 167 LGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGYG 66
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 167 LGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGYG 66
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 257 PARSRGRHSRVSLDVTNDFPLSGGGERVTP 168
PA + SR+++ T+ FPL G G+ P
Sbjct: 58 PASTSSLASRLTVPSTSSFPLKGSGDTKVP 87
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 26.6 bits (56), Expect = 5.5
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 94 CPTPSSVWTW 123
CP PSS+W+W
Sbjct: 864 CPIPSSIWSW 873
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 146 PHENPHREGLLVHHHR*EGNRS 211
P PHR G HHH G+RS
Sbjct: 447 PFWPPHRRGGHCHHHHHNGHRS 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,514,033
Number of Sequences: 27780
Number of extensions: 168708
Number of successful extensions: 511
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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