Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31195
(370 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 175 6e-45
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 172 7e-44
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 172 7e-44
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 171 1e-43
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 171 1e-43
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 171 1e-43
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 171 1e-43
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 171 1e-43
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 171 2e-43
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 4e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 2e-35
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 140 2e-34
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 107 3e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 1e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 50 5e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 6e-06
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 46 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 34 0.034
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 31 0.32
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 31 0.32
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 0.73
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 1.3
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 1.3
At5g43500.2 68418.m05318 expressed protein 28 2.2
At5g43500.1 68418.m05319 expressed protein 28 2.2
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 27 2.9
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 3.9
At3g28790.1 68416.m03593 expressed protein 27 5.2
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 5.2
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 5.2
At3g55320.1 68416.m06144 ABC transporter family protein similar ... 26 9.0
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 26 9.0
At2g26800.3 68415.m03216 hydroxymethylglutaryl-CoA lyase, putati... 26 9.0
At2g26800.2 68415.m03215 hydroxymethylglutaryl-CoA lyase, putati... 26 9.0
At2g26800.1 68415.m03214 hydroxymethylglutaryl-CoA lyase, putati... 26 9.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 175 bits (427), Expect = 6e-45
Identities = 88/122 (72%), Positives = 92/122 (75%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TT+AEREIVRD+K A ++ GQVITIG ERFRCPE
Sbjct: 203 TTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 172 bits (418), Expect = 7e-44
Identities = 87/122 (71%), Positives = 92/122 (75%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRD+K + ++ GQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 172 bits (418), Expect = 7e-44
Identities = 87/122 (71%), Positives = 92/122 (75%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRD+K + ++ GQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 171 bits (416), Expect = 1e-43
Identities = 87/122 (71%), Positives = 91/122 (74%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIG+ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEV 262
Query: 363 LF 368
L+
Sbjct: 263 LY 264
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 171 bits (416), Expect = 1e-43
Identities = 86/122 (70%), Positives = 91/122 (74%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK + ++ GQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 171 bits (416), Expect = 1e-43
Identities = 86/122 (70%), Positives = 91/122 (74%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK + ++ GQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 171 bits (416), Expect = 1e-43
Identities = 87/122 (71%), Positives = 91/122 (74%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK ++ GQVITIG+ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEV 262
Query: 363 LF 368
L+
Sbjct: 263 LY 264
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 171 bits (416), Expect = 1e-43
Identities = 86/122 (70%), Positives = 91/122 (74%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK + ++ GQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 171 bits (415), Expect = 2e-43
Identities = 88/122 (72%), Positives = 90/122 (73%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMF 202
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TTTAEREIVRDIK A ++ GQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEV 262
Query: 363 LF 368
LF
Sbjct: 263 LF 264
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (395), Expect = 4e-41
Identities = 81/122 (66%), Positives = 89/122 (72%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++
Sbjct: 144 SLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTY 203
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TT+AEREIVRDIK ++ GQVITIG ERFRCPE
Sbjct: 204 TTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEV 263
Query: 363 LF 368
LF
Sbjct: 264 LF 265
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (349), Expect = 2e-35
Identities = 71/121 (58%), Positives = 83/121 (68%)
Frame = +3
Query: 6 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 185
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++T
Sbjct: 133 LYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYT 192
Query: 186 TTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEAL 365
T+AEREIVRDIK ++ GQ ITI ERF CPE L
Sbjct: 193 TSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVL 252
Query: 366 F 368
F
Sbjct: 253 F 253
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 140 bits (340), Expect = 2e-34
Identities = 75/122 (61%), Positives = 83/122 (68%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY
Sbjct: 98 SLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY-- 155
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
T+AERE+VRDIK ++ GQVITIG ERFRCPE
Sbjct: 156 -TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEV 214
Query: 363 LF 368
LF
Sbjct: 215 LF 216
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 107 bits (256), Expect = 3e-24
Identities = 51/122 (41%), Positives = 73/122 (59%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+
Sbjct: 142 TLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAM 201
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
TA+ E VR+IK R+ + G+VI +G ERF+ PEA
Sbjct: 202 NKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEA 261
Query: 363 LF 368
LF
Sbjct: 262 LF 263
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 1e-09
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +3
Query: 27 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 206
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDV 232
Query: 207 VRDIK 221
R +K
Sbjct: 233 ARKVK 237
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 50.0 bits (114), Expect = 5e-07
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 9 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 173
+A+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 46.4 bits (105), Expect = 6e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 33 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 212
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S E +V
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVD 212
Query: 213 DIK 221
D K
Sbjct: 213 DAK 215
Score = 32.3 bits (70), Expect = 0.10
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 218 QEKLCYVALDFEQEMGTA-GASTSLEKSYELPDG 316
+EKLC+V+LD +++ A +T ++ +Y LPDG
Sbjct: 215 KEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDG 248
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 45.6 bits (103), Expect = 1e-05
Identities = 34/122 (27%), Positives = 52/122 (42%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 182
SLYA GR +G +D G G P+ EG A R +L G +LT + L + S
Sbjct: 129 SLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSM 188
Query: 183 TTTAEREIVRDIKRNSAMSPSTSSRKWXXXXXXXXXXXXTSFLTGQVITIGNERFRCPEA 362
+ + D+++ + + + + GQVI+IG ER+ EA
Sbjct: 189 NLS-----MSDVEKLKEQYANCAEDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEA 243
Query: 363 LF 368
LF
Sbjct: 244 LF 245
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 33.9 bits (74), Expect = 0.034
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 6 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 164
L+ + GIVL G +H++P +G + R ++ G +TDYL ++L+
Sbjct: 163 LHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLS 215
Score = 29.1 bits (62), Expect = 0.97
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 324 ITIGNERFRCPEALF 368
I IG ERFRCPE LF
Sbjct: 589 IVIGIERFRCPEILF 603
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 30.7 bits (66), Expect = 0.32
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYS 179
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 180 F 182
F
Sbjct: 303 F 303
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 218 QEKLCYVALDFEQEMGTAGASTSLEKSYE 304
+EKLCYVALD++ E+ + S+E S E
Sbjct: 313 KEKLCYVALDYKAEL-SKDTQASVEVSGE 340
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 30.7 bits (66), Expect = 0.32
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYS 179
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 180 F 182
F
Sbjct: 303 F 303
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 218 QEKLCYVALDFEQEMGTAGASTSLEKSYE 304
+EKLCYVALD++ E+ + S+E S E
Sbjct: 313 KEKLCYVALDYKAEL-SKDTQASVEVSGE 340
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.5 bits (63), Expect = 0.73
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 197 LSGGGERVTPLGEDFHEVVGQVATSQVQTEDGVGQSVTFVDGY 69
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 65 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHENPHREGLLV 181
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 65 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHENPHREGLLV 181
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 158
+++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 277 AVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 3 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 158
+++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 289 AVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 104 HPPSGLGWSRLDRLPHENPHREGLLVHHHR*EG 202
HPPS G DR H+ PH+ HHR G
Sbjct: 1274 HPPSSHGPRYHDR--HKGPHQSSSYSGHHRDSG 1304
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 18 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 161
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 58 SPTPYPSTKVTLCPTPSS 111
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 5.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 75 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 197
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 5.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 75 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 197
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
>At3g55320.1 68416.m06144 ABC transporter family protein similar to
multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
[Solanum tuberosum]
Length = 1408
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 12 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 161
+ G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1185 SGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVL-LDGRDLKLYNLRWL 1233
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 25.8 bits (54), Expect = 9.0
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 9 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 170
+ SG+T +V SG G S V + E + P++ ++ L G ++ +K L E+
Sbjct: 390 FPSGKTVAVVGGSGSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ 442
>At2g26800.3 68415.m03216 hydroxymethylglutaryl-CoA lyase, putative
/ 3-hydroxy-3-methylglutarate-CoA lyase, putative /
HMG-CoA lyase, putative similar to SP|P35915
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA
lyase) {Gallus gallus}; contains Pfam profile PF00682:
HMGL-like
Length = 355
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 235 CRPRLRAGNGHRW 273
CRPR G GHRW
Sbjct: 65 CRPRDDVGMGHRW 77
>At2g26800.2 68415.m03215 hydroxymethylglutaryl-CoA lyase, putative
/ 3-hydroxy-3-methylglutarate-CoA lyase, putative /
HMG-CoA lyase, putative similar to SP|P35915
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA
lyase) {Gallus gallus}; contains Pfam profile PF00682:
HMGL-like
Length = 468
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 235 CRPRLRAGNGHRW 273
CRPR G GHRW
Sbjct: 65 CRPRDDVGMGHRW 77
>At2g26800.1 68415.m03214 hydroxymethylglutaryl-CoA lyase, putative
/ 3-hydroxy-3-methylglutarate-CoA lyase, putative /
HMG-CoA lyase, putative similar to SP|P35915
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA
lyase) {Gallus gallus}; contains Pfam profile PF00682:
HMGL-like
Length = 433
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 235 CRPRLRAGNGHRW 273
CRPR G GHRW
Sbjct: 30 CRPRDDVGMGHRW 42
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,389,407
Number of Sequences: 28952
Number of extensions: 169882
Number of successful extensions: 575
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 487896136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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