Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31191
         (543 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0083 + 16374830-16374922,16375917-16375974,16377893-163780...    28   5.5  
02_05_0709 - 31111834-31111887,31111910-31112134                       27   9.7  

>06_03_0083 +
           16374830-16374922,16375917-16375974,16377893-16378089,
           16378176-16378292,16378437-16378497,16378603-16378691,
           16378808-16378882,16378992-16379080,16379203-16379252,
           16379539-16379699,16380004-16380132,16380548-16380928
          Length = 499

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 15  VRFKKEKKTVVFINCHFFAFCVNNYRFRYFIQTYFVKR 128
           ++ KK KK     N   + F ++  RFR+  QT FVKR
Sbjct: 154 LKMKKWKKWESQTNSLEYQFAIDPSRFRFTHQTSFVKR 191


>02_05_0709 - 31111834-31111887,31111910-31112134
          Length = 92

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 6  G*GVRFKKEKKTVVFINCHFFAFC 77
          G G   K E+ TV+F +C FF  C
Sbjct: 17 GIGAILKDERGTVIFSSCRFFERC 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,671,914
Number of Sequences: 37544
Number of extensions: 156568
Number of successful extensions: 302
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)