Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31191
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical pr...    28   3.8  
U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical pr...    27   6.6  

>U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical
           protein C50F2.1 protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 354 AQRTRAFHYNGLYIIFMISISRKRLQDTLRCNRRSIRPKKYKINIVKMRN 205
           + +   + YNG Y     S+ +K     + C  R I+ K+Y IN++ + N
Sbjct: 11  SDKVTEYIYNGSYDSINYSLDQKSNLKNIGCFYRDIKDKQY-INLISLMN 59


>U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical
           protein F46H5.8 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 361 LPSPANTGVSLQWSLYHFHDQYLSKTI 281
           LP P+N G+S    L HFH    +K I
Sbjct: 270 LPMPSNMGISNAEGLAHFHSLVANKQI 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,255,365
Number of Sequences: 27780
Number of extensions: 171959
Number of successful extensions: 426
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)