Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31191
         (543 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g27110.1 68417.m03896 phytochelatin synthetase-related contai...    28   4.6  
At2g04038.1 68415.m00382 bZIP transcription factor family protei...    27   8.1  

>At4g27110.1 68417.m03896 phytochelatin synthetase-related contains
           Pfam PF04833: Phytochelatin synthetase-like conserved
           region
          Length = 668

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 370 PIRLPSPANTGVSLQWSLYHFHDQYLSKTITRYS 269
           P +LP P N G+SL W L   +    S  +T ++
Sbjct: 490 PKKLPCPDNCGISLNWHLNSDYGNGWSARVTLFN 523


>At2g04038.1 68415.m00382 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription factor
          Length = 166

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
 Frame = +1

Query: 172 YNLRVSLPSNHVSHFNYIDFIFFRSD*ASVTSKS----IL*SFSRDTDHENDIKTIVMKR 339
           YN+ +++PS+  S  NY++ +   ++  S +S S    I  + + D DH   I  +  ++
Sbjct: 17  YNV-INMPSSPTSSLNYLNDLIINNNNYSSSSNSQDLMISNNSTSDEDHHQSIMVLDERK 75

Query: 340 PCSLGLGDGSALQSDIRKGFH 402
              +     SA +S +RK  H
Sbjct: 76  QRRMLSNRESARRSRMRKQRH 96


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,253,433
Number of Sequences: 28952
Number of extensions: 147033
Number of successful extensions: 319
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)