Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31184
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   2.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   4.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   4.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.1  

>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = +1

Query: 283 EEAPKVLHKQFNSPINL 333
           ++APK+++ ++NS +N+
Sbjct: 13  QKAPKIVNSKYNSILNI 29


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = +1

Query: 283 EEAPKVLHKQFNSPINL 333
           ++APK+++ ++NS +N+
Sbjct: 13  QKAPKIVNSKYNSILNI 29


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 172 YLRHHPNPAMRAPP 213
           Y R+HP P    PP
Sbjct: 173 YARYHPYPNFGVPP 186


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 246 KGGRVGAAASG 278
           KGG  GAAASG
Sbjct: 119 KGGGAGAAASG 129


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 219 VVRRCPHCWV 190
           VV   PHCWV
Sbjct: 485 VVEGNPHCWV 494


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = -2

Query: 223  SRG*EVPSLLG-WGDDAGN 170
            SRG +V   LG W D AGN
Sbjct: 2389 SRGVKVLIALGGWNDSAGN 2407


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 335 YRLIGELNCLCN 300
           Y ++  LNCLC+
Sbjct: 212 YHILAMLNCLCS 223


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 335 YRLIGELNCLCN 300
           Y ++  LNCLC+
Sbjct: 212 YHILAMLNCLCS 223


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 364 RQQTSPLPTNGHYGRPHVVKRQ 429
           R + SPL  NG+   PH+   Q
Sbjct: 94  RLEKSPLLANGYNHSPHLSHMQ 115


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 244 QKVAESVLQRVVGEEAPKVLHKQFNSP 324
           Q V +  L+  +  +   +LH+QFN P
Sbjct: 615 QNVKKINLKHALDLDRQGLLHRQFNLP 641


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,527
Number of Sequences: 336
Number of extensions: 2861
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)