Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31183
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.1  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +3

Query: 132 SFYKPGRYVTDPGRYDPSR---DNSGRYIP 212
           + ++  +Y  DP ++DP R   +N  + +P
Sbjct: 382 AIHRDPQYFPDPEKFDPERFSDENKAKIVP 411


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 138 YKPGRYVTDPGRYDPSR 188
           Y P  Y  DP +YDP R
Sbjct: 398 YDP-EYYPDPEKYDPER 413


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 488 GPAGWHHLAANVCGCH 441
           GPAG H    N+  CH
Sbjct: 303 GPAGVHLRKKNIHSCH 318


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 183 WGHNGLDQLHSGLVYRTNGEPV 118
           W     D +HSG+V   NG+ +
Sbjct: 311 WRDRIYDAIHSGVVRGDNGQNI 332


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 541 EGYHYLCETENKILGGRS 594
           EGY YLCE  N I  G S
Sbjct: 770 EGY-YLCEAVNGIGSGLS 786


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,783
Number of Sequences: 336
Number of extensions: 3083
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)