Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31183
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21829| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077) 33 0.14
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 33 0.18
SB_4895| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024) 31 0.55
SB_37366| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.82) 29 2.9
SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 29 2.9
SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_44555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_30499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_12073| Best HMM Match : LIM (HMM E-Value=0.49) 28 5.1
SB_7081| Best HMM Match : Extensin_2 (HMM E-Value=0.36) 28 5.1
SB_43300| Best HMM Match : C2 (HMM E-Value=7.2e-05) 28 5.1
SB_38727| Best HMM Match : 7tm_1 (HMM E-Value=9.2e-30) 28 5.1
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 28 6.8
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 28 6.8
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 28 6.8
SB_40027| Best HMM Match : RVT_1 (HMM E-Value=3.8e-11) 27 9.0
SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06) 27 9.0
>SB_21829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 339 YLGDAYKGSSIVPLPVVKPTIAVP--VTPTYVGSKVVTPTYVG-SKVVPP 479
Y+ Y + V P V PT P VTP YV V PTYV S V PP
Sbjct: 257 YVAPPYVAPTFVAPPYVAPTFVAPPYVTPPYVAPSYVAPTYVAPSYVAPP 306
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 339 YLGDAYKGSSIVPLPVVKPTIAVP--VTPTYVGSKVVTPTYVGSKVVPPSGAGCDY 500
Y+ +Y V P V PT P V PT+V VTP YV V P+ Y
Sbjct: 247 YVSPSYVAPPYVAPPYVAPTFVAPPYVAPTFVAPPYVTPPYVAPSYVAPTYVAPSY 302
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 339 YLGDAYKGSSIVPLPVVKPTIAVP--VTPTYVGSKVVTPTYVGSKVVPPS 482
++ Y + V P V P P V PTYV V P YV V PS
Sbjct: 267 FVAPPYVAPTFVAPPYVTPPYVAPSYVAPTYVAPSYVAPPYVAPLYVAPS 316
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 PLPVVKPTIAVP-VTPTYVGSKVVTPTYVGSKVVPPS 482
P P +A+P +TPT+V VTP YV V PS
Sbjct: 215 PNPTAPTYVALPYITPTFVAPPYVTPPYVTPPYVSPS 251
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Frame = +3
Query: 372 VPLPVVKPTIAVP-------VTPTYVGSKVVTPTYVGSKVVPPS 482
V LP + PT P VTP YV V P YV V P+
Sbjct: 223 VALPYITPTFVAPPYVTPPYVTPPYVSPSYVAPPYVAPPYVAPT 266
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 339 YLGDAYKGSSIVPLP-VVKPTIAVP-VTPTYVGSKVVTPTYVGSKVVPP 479
Y+ Y S V P VV+ +A P V+P YV V+P YV V P
Sbjct: 307 YVAPLYVAPSYVAQPYVVQLYVAPPYVSPPYVSPPYVSPPYVSPPYVSP 355
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +3
Query: 339 YLGDAYKGSSIVPLPVVKPTIAVP--VTPTYVGSKVVTPTYVGSKVV 473
Y+ + V P V P+ P V P+YV V P YV V
Sbjct: 272 YVAPTFVAPPYVTPPYVAPSYVAPTYVAPSYVAPPYVAPLYVAPSYV 318
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTN 504
HP A W HP A WCHP A N
Sbjct: 518 HPTKTQANWYHPTKTQANWCHPTKTQANWN 547
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A WCHP
Sbjct: 408 HPSKTHANWCHPTKTQANWCHP 429
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A WCHP
Sbjct: 418 HPTKTQANWCHPTKTQANWCHP 439
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A WCHP
Sbjct: 428 HPTKTQANWCHPTKTQANWCHP 449
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP T A W +P A WCHP
Sbjct: 308 HPTTTHANWCYPTKTQANWCHP 329
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 433 ARW*HPHTLAARWCHPAGPGATTN 504
A W HP+ A WCHP A N
Sbjct: 24 ANWFHPYKTQANWCHPTKTQANLN 47
Score = 31.5 bits (68), Expect = 0.55
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHPAGPGA 495
+HP + + W HP+ A WC+P A
Sbjct: 47 NHPIKIQSNWCHPNKTQANWCYPTNTQA 74
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP T A WC+P
Sbjct: 298 HPTKTHANWCHPTTTHANWCYP 319
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = +2
Query: 371 CSPARREAYHCRASHTHIRWQQGGDTHIRWQQGGATQ 481
C P +A C + TH W T W TQ
Sbjct: 67 CYPTNTQANLCHPTKTHANWNHPSKTRANWNHPSKTQ 103
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP+ A W HP+ A W HP
Sbjct: 218 HPNKTQANWYHPNKTQANWNHP 239
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP+ A W HP A W HP
Sbjct: 228 HPNKTQANWNHPTKTQANWYHP 249
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTNTGS 513
HP A W HP W HP A N S
Sbjct: 338 HPTKTQANWYHPSKTQVNWYHPTKTQANWNQAS 370
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP A W HP+
Sbjct: 258 HPTKTQANWYHPSKTQANWYHPS 280
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP A W HP+
Sbjct: 468 HPSKTQANWYHPTKTQANWYHPS 490
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP A W HP+
Sbjct: 178 HPTKTQANWNHPSKTRANWNHPS 200
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHP 480
+HP A W HP A W HP
Sbjct: 237 NHPTKTQANWYHPTKTQANWYHP 259
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP A W HP+
Sbjct: 248 HPTKTQANWYHPTKTQANWYHPS 270
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +2
Query: 371 CSPARREAYHCRASHTHIRWQQGGDTHIRWQQGGATQ 481
C P + +A S T + W T W Q TQ
Sbjct: 337 CHPTKTQANWYHPSKTQVNWYHPTKTQANWNQASKTQ 373
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 458 HPTKTQANWYHPSKTQANWYHP 479
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 478 HPTKTQANWYHPSKTKANWYHP 499
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP A W HP+
Sbjct: 78 HPTKTHANWNHPSKTRANWNHPS 100
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTN 504
HP A W HP A CHP A N
Sbjct: 158 HPTKTQANWYHPSKTQAYLCHPTKTQANWN 187
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/37 (27%), Positives = 14/37 (37%)
Frame = +2
Query: 371 CSPARREAYHCRASHTHIRWQQGGDTHIRWQQGGATQ 481
C P + +A C + T W T + W TQ
Sbjct: 327 CHPTKTQACLCHPTKTQANWYHPSKTQVNWYHPTKTQ 363
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 508 HPTKTQANWYHPTKTQANWYHP 529
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTN 504
HP+ A W +P A CHP A N
Sbjct: 58 HPNKTQANWCYPTNTQANLCHPTKTHANWN 87
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP + W HP+
Sbjct: 268 HPSKTQANWYHPSKTQSNWNHPS 290
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHP 480
+HP A HP A WCHP
Sbjct: 287 NHPSKTQANCGHPTKTHANWCHP 309
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 528 HPTKTQANWCHPTKTQANWNHP 549
>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
Length = 677
Score = 33.5 bits (73), Expect = 0.14
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHP 480
+HP A W HP+ A WCHP
Sbjct: 282 NHPIKTQANWCHPNKTQANWCHP 304
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 433 ARW*HPHTLAARWCHPAGPGATTN 504
A W HP+ A WCHP A N
Sbjct: 13 ANWCHPYKTQANWCHPTKTQANLN 36
Score = 31.5 bits (68), Expect = 0.55
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 433 ARW*HPHTLAARWCHPAGPGATTN 504
A W HP+ A WCHP A N
Sbjct: 545 ANWCHPYKTQANWCHPTKTQANLN 568
Score = 30.7 bits (66), Expect = 0.97
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHPAGPGA 495
+HP + + W HP+ WC+P A
Sbjct: 36 NHPSKIQSNWYHPNKTQTNWCYPTNTQA 63
Score = 30.7 bits (66), Expect = 0.97
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHPAGPGA 495
+HP + + W HP+ WC+P A
Sbjct: 568 NHPSKIQSNWYHPNKTQTNWCYPTNTQA 595
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTN 504
HP+ A W HP A CHP A N
Sbjct: 293 HPNKTQANWCHPTKTQANLCHPTKTQANWN 322
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 377 PARREAYHCRASHTHIRWQQGGDTHIRWQQGGATQ 481
P++ +AY C + TH W T W Q
Sbjct: 414 PSKTQAYLCHPTKTHANWNHPSKTWANWNHPSKNQ 448
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 383 HPTKTQANWNHPSKTQANWYHP 404
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHPA 483
+HP A W HP + W HP+
Sbjct: 392 NHPSKTQANWYHPPKTQSNWYHPS 415
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 473 HPAKTQANWYHPTKTQANWYHP 494
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHP 480
HP A W HP A W HP
Sbjct: 649 HPTKTQANWYHPTKTQANWYHP 670
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTNTGS*RXXN-DVSAEGYHYLC 561
HP+ W +P A CHP A N S N +E YLC
Sbjct: 47 HPNKTQTNWCYPTNTQANLCHPTKTHANWNHPSKTQDNCGHPSETQAYLC 96
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTNTGS*RXXN-DVSAEGYHYLC 561
HP+ W +P A CHP A N S N +E YLC
Sbjct: 213 HPNKTQTNWCYPTNTQANLCHPTKTHANWNHPSKTQANCGHPSETQAYLC 262
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPA 483
HP A W HP + W HP+
Sbjct: 503 HPTKTQANWYHPSKTQSNWYHPS 525
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTNTGS*RXXN-DVSAEGYHYLC 561
HP+ W +P A CHP A N S N +E YLC
Sbjct: 579 HPNKTQTNWCYPTNTQANLCHPTKTHANWNHPSKTQANCGHPSETQAYLC 628
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 351 AYKGSSIVPLPVVKPTIAVPVTPTYVGSKVVTPTYVGSKVV 473
A + SS+V +P +P PVTP V K VTP V ++ V
Sbjct: 753 ASEDSSVVAMPAARPVTPKPVTPKPVTPKPVTPKPVTTRPV 793
>SB_4895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP YVG LLP YVG
Sbjct: 109 PGNVGGHLLLPGYVGGHLLLPGYVG 133
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP YVG LLP YVG
Sbjct: 149 PGYVGGHLLLPGYVGGHPLLPGYVG 173
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYV 419
P +GG LLP YVG LLP YV
Sbjct: 259 PGNVGGHPLLPGYVGGHLLLPVYV 282
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P + G LLP YVG LLP YVG
Sbjct: 139 PGNVSGHLLLPGYVGGHLLLPGYVG 163
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYV 419
P +GG LLP YVG LLP YV
Sbjct: 289 PGNVGGHPLLPGYVGGHPLLPGYV 312
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP VG LLP YVG
Sbjct: 99 PGNVGGHLLLPGNVGGHLLLPGYVG 123
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP YVG LLP VG
Sbjct: 179 PGNVGGHPLLPGYVGGHLLLPGNVG 203
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP YVG LLP VG
Sbjct: 199 PGNVGGHPLLPGYVGGHLLLPGNVG 223
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP VG LLP YVG
Sbjct: 249 PGNVGGHLLLPGNVGGHPLLPGYVG 273
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP YVG LLP VG
Sbjct: 159 PGYVGGHPLLPGYVGGHLLLPGNVG 183
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP VG LLP YVG
Sbjct: 169 PGYVGGHLLLPGNVGGHPLLPGYVG 193
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 490 PAPLGGTTLLPTYVGVTTLLPTYVG 416
P +GG LLP VG LLP YVG
Sbjct: 189 PGYVGGHLLLPGNVGGHPLLPGYVG 213
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 408 PVTPTYVGSKVVTPTYVGSKVVPPSGAG 491
P+ P YVG ++ P YV ++ P G
Sbjct: 266 PLLPGYVGGHLLLPVYVSGHLLLPGNVG 293
>SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024)
Length = 180
Score = 31.5 bits (68), Expect = 0.55
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 412 SHPHTLAARW*HPHTLAARWCHPAGPGA 495
+HP + + W HP+ A WC+P A
Sbjct: 127 NHPIKIQSNWCHPNKTQANWCYPTNTQA 154
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTNTGS*RXXN-DVSAEGYHYLC 561
HP+ W +P A CHP A N S N +E YLC
Sbjct: 58 HPNKTQTNWCYPTNTQANLCHPTKTHANWNHPSKTQANCGHPSETQAYLC 107
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 415 HPHTLAARW*HPHTLAARWCHPAGPGATTN 504
HP+ A W +P A CHP A N
Sbjct: 138 HPNKTQANWCYPTNTQANLCHPTKTHANWN 167
>SB_37366| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.82)
Length = 705
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 PLPVVKPTIAVPVTPTYVGSKVVTPTYVG-SKVVPPS 482
P PVV P++A +P S PT + ++VVPPS
Sbjct: 153 PSPVVPPSVASTSSPQSASSMSQNPTNIDPTQVVPPS 189
>SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 PLPVVKPTIAVPVTPTYVGSKVVTPTYVG-SKVVPPS 482
P PVV P++A +P S PT + ++VVPPS
Sbjct: 110 PSPVVPPSVASTSSPQSASSMSQNPTNIDPTQVVPPS 146
>SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 636
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 PLPVVKPTIAVPVTPTYVGSKVVTPTYVG-SKVVPPS 482
P PVV P++A +P S PT + ++VVPPS
Sbjct: 494 PSPVVPPSVASTSSPQSASSMSQNPTNIDPTQVVPPS 530
>SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 PLPVVKPTIAVPVTPTYVGSKVVTPTYVG-SKVVPPS 482
P PVV P++A +P S PT + ++VVPPS
Sbjct: 110 PSPVVPPSVASTSSPQSASSMSQNPTNIDPTQVVPPS 146
>SB_44555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 31 LFGNLPVSDSGAGRRNWKVHSFPVQPSLLYWFSIRSINQAAM 156
LF + V+ A R P PSL+ W + IN+AA+
Sbjct: 65 LFSRMLVAKQTANRSQVNHVELPSYPSLVQWLQVVGINEAAI 106
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 363 SSIVPLPVVKPTIAVPVTPTYVGSKVVTPT 452
S++VP V+PT V T T V + V PT
Sbjct: 159 STVVPTSTVEPTSTVEPTSTVVPTSTVVPT 188
>SB_30499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 280 PVLLEVPEEPTSEPRRTSANTLVMLTRDPA 369
PVL +P S PRR S +LTR PA
Sbjct: 111 PVLNHTVVQPPSSPRRCSVQLEQILTRSPA 140
>SB_12073| Best HMM Match : LIM (HMM E-Value=0.49)
Length = 500
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 414 TPTYVGSKVVTPTYVGSKVVPPSGAGCDY 500
T +YVG + + P +VG + +PP G Y
Sbjct: 8 TVSYVGKQHIPPYHVGKQYIPPYYVGQQY 36
>SB_7081| Best HMM Match : Extensin_2 (HMM E-Value=0.36)
Length = 536
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 360 GSSIVPLPVVKPTIAVPVTPTYVGSKVVTPTYVGSKVVPPSGAGCDYKY 506
GSS+V L V ++ V + VGS VV + VGS VV PS G Y
Sbjct: 217 GSSVVYLSRVGSSV---VYLSRVGSSVVYLSRVGSSVVYPSRVGSSVMY 262
>SB_43300| Best HMM Match : C2 (HMM E-Value=7.2e-05)
Length = 304
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 280 PVLLEVPEEPTSEPRRTSANTLVMLTRDPA 369
PVL +P S PRR S +LTR PA
Sbjct: 86 PVLNHTVVQPPSSPRRCSVQLEQILTRSPA 115
>SB_38727| Best HMM Match : 7tm_1 (HMM E-Value=9.2e-30)
Length = 420
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 29 VFLAICLSLTVALAAETGKYTPFQYN 106
VFL +S+TV + + GKY P YN
Sbjct: 132 VFLVWGISITVGVLSVVGKYEPLAYN 157
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 1 VCFITTGNACLFGNLPVSDSGAGRRNWKVHSFPVQP 108
+C++TTG+A L + D GR W + F P
Sbjct: 463 LCYVTTGSAALPKDCDAGDK--GRTRWIIFDFEAMP 496
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 375 PLPVVKPTIA--VPVTPTYVGSKVVTPTYVGSKVVPPSGA 488
P V PT A PVTPT + VTPT + V P+ A
Sbjct: 52 PAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAA 91
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 375 PLPVVKPTIA--VPVTPTYVGSKVVTPTYVGSKVVPPSGA 488
P V PT A PVTPT + VTPT + V P+ A
Sbjct: 209 PAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAA 248
>SB_40027| Best HMM Match : RVT_1 (HMM E-Value=3.8e-11)
Length = 587
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 9/49 (18%)
Frame = +3
Query: 342 LGDAYKGSSIVPLPVVKPTIAV-----PVTPTYVGSKV----VTPTYVG 461
L ++K + +VPLP +KP + V P++ T SK+ V P+YVG
Sbjct: 273 LPPSWKPADVVPLPKLKPVVDVNKHLRPISLTPAISKLAEEFVVPSYVG 321
>SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06)
Length = 425
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 473 HHLAANVCGCHHLAANVCGCDWHGNGRL 390
H N GC N GC++ G+ R+
Sbjct: 377 HFQRVNTMGCEFQGGNTMGCEFQGDSRI 404
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,080,871
Number of Sequences: 59808
Number of extensions: 406580
Number of successful extensions: 1503
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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