Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31183
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.4  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 496 TTNTGS*RXXNDVSAEGYHYLCETENK 576
           T  TG     N VS + Y YLC  EN+
Sbjct: 544 TETTGEPGKIN-VSEDAYRYLCMPENQ 569


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 496 TTNTGS*RXXNDVSAEGYHYLCETENK 576
           T  TG     N VS + Y YLC  EN+
Sbjct: 544 TETTGEPGKIN-VSEDAYRYLCMPENQ 569


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 389 HDGQGNNAGSLVSITKVFA 333
           H G G N G  + ITK+ A
Sbjct: 148 HTGVGRNVGYKIPITKLTA 166


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 389 HDGQGNNAGSLVSITKVFA 333
           H G G N G  + ITK+ A
Sbjct: 148 HTGVGRNVGYKIPITKLTA 166


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 389 HDGQGNNAGSLVSITKVFA 333
           H G G N G  + ITK+ A
Sbjct: 148 HTGVGRNVGYKIPITKLTA 166


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 332 QQIPW*CLQGIQHCS 376
           QQI W  L+ IQ CS
Sbjct: 557 QQIAWMALKMIQACS 571


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,063
Number of Sequences: 438
Number of extensions: 3792
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)