Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31183
         (609 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid t...    30   1.0  
At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid t...    30   1.0  
At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK...    28   4.2  
At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein / antiterm...    28   5.6  
At4g02640.2 68417.m00359 bZIP transcription factor family protei...    27   7.4  
At5g44780.1 68418.m05488 expressed protein low similarity to SP|...    27   9.7  
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot...    27   9.7  

>At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to
           proline-rich cell wall protein [Medicago sativa]
           GI:3818416; contains Pfam profile PF00234 Protease
           inhibitor/seed storage/LTP family
          Length = 291

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +3

Query: 375 PLPVVKPTIAVPVTPTYVGSKVVTPTYVGSKVVPPSGAG 491
           PLP+V P +    TP   G K   P   GS V PPSG G
Sbjct: 168 PLPIVGPILPPGTTPPATGGKDCPPP-PGS-VKPPSGGG 204


>At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to
           proline-rich cell wall protein [Medicago sativa]
           GI:3818416; contains Pfam profile PF00234 Protease
           inhibitor/seed storage/LTP family
          Length = 291

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +3

Query: 375 PLPVVKPTIAVPVTPTYVGSKVVTPTYVGSKVVPPSGAG 491
           PLP+V P +    TP   G K   P   GS V PPSG G
Sbjct: 168 PLPIVGPILPPGTTPPATGGKDCPPP-PGS-VKPPSGGG 204


>At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK,
           putative similar to cyclin dependent kinase C
           [Lycopersicon esculentum] gi|15215944|emb|CAC51391
          Length = 505

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 129 HSFYKPGRYVTDPGRYDPSRDNSGRYIPDNSG 224
           H+FY   R    P RY PS + SG Y     G
Sbjct: 413 HNFYGKPRGPPGPNRYPPSGNQSGGYNQSRGG 444


>At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein /
           antitermination NusB domain-containing protein low
           similarity to SP|P36929 SUN protein (FMU protein)
           {Escherichia coli}; contains Pfam profiles PF01189:
           NOL1/NOP2/sun family, PF01029: NusB family
          Length = 523

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 35  LAICLSLTVALAAETGKYTPFQYNRVYSTGSPF 133
           +A  LS  V L+AET K +P  + R   T  PF
Sbjct: 1   MAQLLSFRVYLSAETQKASPGSFKRTQKTRKPF 33


>At4g02640.2 68417.m00359 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription
           factor; identical to cDNA bZIP protein BZO2H1,
           alternatively spliced GI:10954094
          Length = 417

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 475 GTTLLPTYVGVTTLLPTYVGVTGTAMVGFTTG 380
           G+ + P  +GVT+ LP  V  TG +M   T+G
Sbjct: 165 GSLMTPGELGVTSSLPAEVKKTGVSMKQVTSG 196


>At5g44780.1 68418.m05488 expressed protein low similarity to
           SP|Q38732 DAG protein, chloroplast precursor
           {Antirrhinum majus}
          Length = 723

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 366 SIVPLPVVKPTIAVPVTPTYVGS--KVVTPTYVGSKVVPPSGAGCDYKYGII 515
           S++P  VVK + A+  +P  + S  +     Y G     P   GCD+ + +I
Sbjct: 36  SLLPRSVVKQSTAINRSPARLFSTTQYQYDPYTGEDSFMPDNEGCDFNHWLI 87


>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
           similar to pollen-specific BP10 protein
           [SP|Q00624][Brassica napus]; contains Pfam profile:
           PF00394 Multicopper oxidase
          Length = 551

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 41  ICLSLTVALAAETGKYTPFQYNRVYSTGSP 130
           +CL+ TVAL +    Y  + +N  Y T +P
Sbjct: 11  VCLASTVALVSAGDPYFYYTWNVTYGTAAP 40


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,029,634
Number of Sequences: 28952
Number of extensions: 264505
Number of successful extensions: 749
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)