Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31182
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0444 - 9444340-9444829,9444985-9445688                           29   3.8  
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104...    28   6.7  

>09_02_0444 - 9444340-9444829,9444985-9445688
          Length = 397

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 258 AYVSGNYNIRENPNFNW 208
           AY  G+Y++ +NPN+ W
Sbjct: 84  AYTVGSYHVADNPNYRW 100


>08_01_0130 +
           1040696-1041049,1042135-1042275,1042422-1042673,
           1043797-1043904,1044289-1044593,1044720-1044841,
           1044979-1045225,1045308-1045365,1045414-1045530,
           1045718-1045753,1046492-1046554,1046958-1047047,
           1047241-1047399,1047475-1047596,1048145-1048217,
           1048307-1048375
          Length = 771

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 92  YISTRTIFLYELAKVSAIYNAIGKSVNNVKI 184
           YIS  T+   EL+  S++Y  I  SVN  K+
Sbjct: 98  YISMGTLVRQELSPASSLYKKIANSVNEGKL 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,189,657
Number of Sequences: 37544
Number of extensions: 240892
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)