Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31180
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.99 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   4.0  
U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           21   9.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 354 YPHSVIFSFNIIFY 395
           YP  V+ +FNI+FY
Sbjct: 38  YPRIVVSTFNIVFY 51


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 519 YSHQIIVRIIKYLLYLLME 575
           Y HQ+++ I+ YL++ + E
Sbjct: 232 YGHQLLLTILTYLIWTIYE 250


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 283 NQYFKEKTCRTDPTR 239
           N Y++ +T RT+P R
Sbjct: 230 NPYYRPRTSRTEPPR 244


>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 516 FKRLRNRFEFFEKDHPVTKFIRKQLTK 436
           F RLR      + DH ++KF   Q+ +
Sbjct: 17  FDRLRQVIPSLDADHKLSKFETLQMAQ 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,979
Number of Sequences: 336
Number of extensions: 2759
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)