Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31179
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.8  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 108 YSPLRTGYLPPFNS 149
           Y PLRT Y   FNS
Sbjct: 34  YGPLRTSYQHHFNS 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 129 YLPPFNSFYYPFAQ 170
           Y P F+ FYYP  Q
Sbjct: 99  YEPSFDLFYYPSRQ 112


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +3

Query: 144 NSFYYPFAQRSNDYELHSEEELRRNSLPRHL*EDIL 251
           N  +YPF      Y L S   L  N+L      DIL
Sbjct: 172 NVLFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDIL 207


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +3

Query: 144 NSFYYPFAQRSNDYELHSEEELRRNSLPRHL*EDIL 251
           N  +YPF      Y L S   L  N+L      DIL
Sbjct: 128 NVLFYPFLPSDVSYNLFSFVPLVVNALDHLFLNDIL 163


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 105 WYSPLRTGYLPPFNSF 152
           W+SP    Y P  NS+
Sbjct: 71  WHSPRFHAYFPTANSY 86


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 108 YSPLRTGYLPPFNSFYYPFAQRSNDY 185
           YSP  +   P +N +YY + Q +  Y
Sbjct: 27  YSPPPSYCDPWYNPYYYQYLQNAALY 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,047
Number of Sequences: 336
Number of extensions: 1971
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)